Bos taurus (cow): 327689
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Entry
327689 CDS
T01008
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
bta
Bos taurus (cow)
Pathway
bta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
327689 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
327689 (CPSF2)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
327689 (CPSF2)
U7-dependent histone pre-mRNA processing factors
327689 (CPSF2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
327689
NCBI-ProteinID:
NP_787002
BGD-bta:
BT19583
Ensembl:
ENSBTAG00000010227
VGNC:
27671
UniProt:
Q10568
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All DBs
Position
21:56809048..56845613
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AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctttctggggtccaagaagaatctgctctttgc
tatcttctccaagtcgacgagtttagatttttattggactgtggctgggatgagcacttt
tctatggatattatcgattccctgaggaagcacgttcaccagatcgatgcggtcttgctg
tctcatcctgaccctctccatcttggcgccctcccctatgctgttggaaagttgggtctg
aactgcgccatctatgcaaccattcccgtttataaaatgggacagatgttcatgtatgac
ctttatcagtcccgacacaatacagaagattttacactctttaccctagatgatgtggat
gcagcctttgataagatacaacagttaaaattctctcagattgtgaatttgaaaggcaaa
ggacatggcttgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccctccttacttatcaca
gactcatttaatgctacttatgtgcagcccaggagaaagcaaagagacgagcagcttctg
acaaatgtcctggaaacacttcgaggtgatggaaacgtattaatagccgtggacactgca
ggcagagttctggaacttgctcaactcctagatcagatttggagaactaaagacgctgga
ttgggtgtttactcgttggcgctcctcaataatgtcagctacaatgtggtggagttctcc
aagtcccaggttgaatggatgagtgataagttgatgaggtgttttgaagacaaaagaaat
aatccatttcagtttcgtcatctctctctatgtcatggtctttctgacttggctcgagta
cctagccctaaagttgtacttgccagccaacctgacctggaatgtggattttcaagggat
ctctttattcagtggtgccaggaccctaaaaactcgatcattctgacttacagaactact
cctgggactttggcacgtttcctaattgataatccttctgaaaaagttacagaaatagag
ttgaggaaacgtgtgaaacttgaagggaaagaacttgaagaatacttggaaaaagagaaa
ctaaagaaagaagctgctaaaaagcttgagcagtcaaaagaggcggacatagattccagt
gatgagagtgacgctgaggaagacattgaccagccatcagcgcataagaccaagcatgac
ctgatgatgaaaggcgaaggcagtcgtaaaggaagtttcttcaaacaggctaaaaagtct
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaatcatc
aaaccagaggatttcttagtgccagaacttcaagctactgaagaagaaaaaagcaaatta
gagtctggcctgacaaatggagacgaacccatggatcaggatttatctgatgttcctact
aagtgtatttctacaacagaatctattgaaataaaggccagggttacttacatagactat
gaaggacgctctgatggggattccattaaaaaaatcatcaatcagatgaaaccacgccag
ttaatcatcgtccatggaccaccagaagccagtcaggatcttgcagagtgctgtcgtgca
tttggtgggaaagatattaaagtatacatgccaaagctgcacgagacagtcgatgccact
agtgaaactcacatctaccaggtgagattaaaagattcacttgtcagctcccttcagttt
tgtaaggcaaaagatgctgaactagcttggatagacggtgtcttagacatgagagtttcc
aaagtggacacaggagttattttagaagaaggcgaactaaaggatgatggagaagactct
gaaatgcaggtggatgcgccttcagattctagtgtcatagcacagcagaaggccatgaaa
agtctgttcggagacgatgagaaagaaacaggtgaagaaagtgagatcattcctactctg
gaacccttaccacctcatgaggttcctggacatcagtcggttttcatgaatgaaccaaga
ctgtcagacttcaaacaagttcttttacgggaggggatccaagctgaattcgtaggaggc
gtgctcgtttgcaacaatcaagtggcagtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagacttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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