Bos taurus (cow): 338072
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Entry
338072 CDS
T01008
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
338072 (SMARCAL1)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
338072 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
338072
NCBI-ProteinID:
NP_788839
BGD-bta:
BT11729
Ensembl:
ENSBTAG00000003843
VGNC:
34990
UniProt:
Q9TTA5
A0A452DHZ0
LinkDB
All DBs
Position
2:104420536..104474264
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AA seq
941 aa
AA seq
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MSISPLKCPCLLQRSRGKKIEANRQKALARRAEKLLAEQHQKPAQSKQGPSQNLPRDPSK
SGSHGIFFKQQNPSSSSHGDQRPQNPHSFPPNTSEQAKGMWQRPEEMPTACPSYRPPNQV
TVAGISLPLANSPPGVPSQQLWGCELGQGHPQASLETQSTPFTNTTHEPLRKVKNFQETA
ASSCGQPPRDPELEARIGRPSTSGQNISGSVMPRTEGRLQQKAGTPLHRVVGSQQGRCIR
NGERFQVKIGYNEALIAVFKSLPSRSYDPATKTWNFSMTDYGPLMKAAQRLPGITLQPLE
GAEGHMESPSTSSGIIAKTGLPAAPSLAFVKGQCVLISRARFEADISYSEDLIALFKQMD
SRKYDVKTRKWSFLLEEYSKLMERVRGPPQVQLDPLPKTLTLFRAQLQKTSLSPVADIPE
ADLSRVDSKLVSSLLPFQRAGVNFAIAQRGRLLLADDMGLGKTIQAICIAAYYRKEWPLL
VVVPSSVRFTWEQAFCRWLPSLNPLDINVVVTGKDRLTDGLVNIVSFDLLSKLEKQLKPP
FKVVIIDESHFLKNIKTAVCAAMPLLKVAKRVILLSGTPAMSRPAELYTQILAVRPTFFP
QFHAFGLRYCGAKRQPWGWDYSGSSNLGELKLLLEEAVMLRRLKGDVLSQLPAKQPRWWW
SPQARSMPGPEPPWMPPAKEMTTKDKTKQQQKEALILFFNRTAEAKIPSIIEYILDLLES
GREKFLVFAHHKVVLDAITKELERKRVQHIRIDGSTSSADRETSASSFSCPRALRGVLSI
TAANMGLTFSSADLVVFGELFWNPGVLMQAEDRVHRIGQLSSVSIHYLVARGTADDYLWP
LIQEKIKVLGEAGLSETNFSEMTEATDYFSKDSKQQKIYNLFQKSFEEDGNDMELLEAAE
SFDPGSQDTGDKLDESTLTGSPVKKKRFEFFDNWDSFTSPL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagcatctccccattaaaatgtccttgcctcttacagaggagcagaggaaaaaaaatt
gaagcaaatcggcagaaggctctggcccgaagagctgagaaactattagcagaacagcat
cagaaacctgcccagtccaagcagggcccatcccaaaacctcccccgagatccttctaag
tcagggagccatggcatctttttcaaacaacaaaatcccagcagttcatctcatggtgac
cagagacctcaaaatccccacagttttccacccaacacctctgagcaggcgaaggggatg
tggcagaggccagaagagatgcccacagcctgcccaagctaccgcccaccaaatcaagtg
actgtcgctgggatctccctgcccctggcaaacagtcctccaggggtccccagccaacag
ctttggggttgtgagttaggtcaaggtcatcctcaggcttcactcgagacccagtcaaca
cccttcactaacacaactcacgagcctttgcgcaaagtgaagaatttccaggagacagca
gcctcttcctgtggacagcctcctagggatcctgaattagaggccaggatcggaagacct
tccacctctgggcagaacatttcggggagtgtgatgcccaggacagaaggaagactgcaa
cagaaagcagggaccccgctgcacagagtggtaggctcccagcagggaaggtgtatccgg
aacggagagcgattccaggtgaagattgggtacaatgaggcgctcatcgcagtgtttaag
agtctgcccagcagaagttacgatcctgccaccaagacgtggaacttcagcatgactgac
tatggtcccctaatgaaagcagcccagcgcctcccagggatcaccctgcagcctttggaa
ggagccgagggccacatggagtcaccctccaccagcagtggcattatagccaagaccggc
cttcctgcagctccctccctggcctttgtcaaagggcagtgcgtgctcatctcccgggcc
cgcttcgaggcagacatcagctattcagaagacctgattgcactgtttaaacagatggat
tccagaaaatatgatgtcaagacccggaagtggagctttctcctggaagaatacagtaaa
ctcatggaaagagtgcgcggccctccacaagttcagctggatcctctgcccaagaccctc
accctttttcgcgctcagctccagaagacgtctctctctcctgtggcagacatccccgag
gcagacctgtccagggtggactccaagcttgtgtctagcttgctgccctttcagagagct
ggagtcaatttcgctatagcacaaagaggccgcctgctgcttgccgatgacatgggcctg
gggaagaccatccaagccatctgcatagcggcctattaccggaaggagtggcccctcctg
gtggtggtgccgtcatctgtgcgcttcacctgggagcaggccttctgtcggtggctgccg
tctctgaacccattagacatcaacgtcgtggtaaccgggaaggaccgcctgacagatggc
ttggtcaacattgtcagttttgatcttctgagcaagttagaaaagcagctaaaaccccca
tttaaagttgtcatcattgatgaatcccacttcctcaaaaacattaagactgccgtgtgc
gcagctatgcccctcctcaaggttgccaagagggtgatcttactgtcaggcacaccagca
atgtcccggccggcggagctctacacgcagatcctcgccgtcaggccgaccttcttccct
cagttccatgcctttggacttcgctactgtggcgccaagcggcagccctggggatgggac
tactcgggctcctccaacctgggggagctgaagctcctgctagaggaggcggtcatgctg
cgacgcctcaagggtgatgtcctctcccagctcccagccaagcagccaagatggtggtgg
tcgccccaggccagatcaatgccaggaccagagccgccctggatgccgcccgccaaggag
atgaccaccaaggacaaaactaagcagcagcaaaaagaagccctcattctcttcttcaac
agaacagctgaagctaaaattccatctatcatcgaatatatcctggacctgctagaaagt
ggacgagagaagtttcttgtgtttgcgcaccataaggtggttctggatgcaattactaag
gagcttgagaggaagcgcgtgcagcacatccgtatcgatggctccacctcctcggccgac
cgcgagacctctgccagcagtttcagttgtccccgggccctgcgtggcgtgctgtccatc
accgccgccaacatgggcctcaccttctcctcggctgacctggtggtgttcggggagctg
ttttggaacccgggggtgctgatgcaggctgaggaccgggtgcaccgcatcggacaattg
agctccgtgagcatccactacctggtggcgagaggcacggctgatgactacctctggccc
ctgattcaagagaagattaaagttctgggtgaagccgggctctctgagaccaatttttca
gaaatgacagaagccacagattacttctccaaggactcaaagcagcagaagatctacaac
ctattccagaagtccttcgaggaagacggaaatgatatggagctcctggaggcagcagag
tcctttgatccaggttcccaggacacgggagacaagctggatgaaagcacattgacgggc
agcccagtgaagaagaagagatttgaattttttgataactgggacagctttacctctcct
ctataa
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