KEGG   Bos taurus (cow): 404126
Entry
404126            CDS       T01008                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bta  Bos taurus (cow)
Pathway
bta03082  ATP-dependent chromatin remodeling
bta03083  Polycomb repressive complex
bta04110  Cell cycle
bta04213  Longevity regulating pathway - multiple species
bta04330  Notch signaling pathway
bta04350  TGF-beta signaling pathway
bta04613  Neutrophil extracellular trap formation
bta04919  Thyroid hormone signaling pathway
bta05016  Huntington disease
bta05031  Amphetamine addiction
bta05034  Alcoholism
bta05165  Human papillomavirus infection
bta05169  Epstein-Barr virus infection
bta05200  Pathways in cancer
bta05202  Transcriptional misregulation in cancer
bta05203  Viral carcinogenesis
bta05206  MicroRNAs in cancer
bta05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    404126 (HDAC1)
   03083 Polycomb repressive complex
    404126 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    404126 (HDAC1)
   04350 TGF-beta signaling pathway
    404126 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    404126 (HDAC1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    404126 (HDAC1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    404126 (HDAC1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    404126 (HDAC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    404126 (HDAC1)
   05202 Transcriptional misregulation in cancer
    404126 (HDAC1)
   05206 MicroRNAs in cancer
    404126 (HDAC1)
   05203 Viral carcinogenesis
    404126 (HDAC1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    404126 (HDAC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    404126 (HDAC1)
   05165 Human papillomavirus infection
    404126 (HDAC1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    404126 (HDAC1)
  09165 Substance dependence
   05031 Amphetamine addiction
    404126 (HDAC1)
   05034 Alcoholism
    404126 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bta03036]
    404126 (HDAC1)
Enzymes [BR:bta01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     404126 (HDAC1)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     404126 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     404126 (HDAC1)
    BRAF-HDAC complex
     404126 (HDAC1)
    REST complex
     404126 (HDAC1)
    SHIP complex
     404126 (HDAC1)
    MiDAC complex
     404126 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     404126 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    404126 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    404126 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 404126
NCBI-ProteinID: NP_001032521
BGD-bta: BT24774
Ensembl: ENSBTAG00000012698
VGNC: 49065
UniProt: Q32PJ8
LinkDB
Position
2:complement(121225598..121257579)
AA seq 482 aa
MAQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKQEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccaagaggaaagtctgttactattacgacggggatgttgga
aattactattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcataat
ttactccttaactatggtctctaccggaagatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagtgatgactacattaaattcttacgctccatccgc
ccagataacatgtccgagtacagcaagcagatgcagagattcaacgtcggtgaggactgt
cccgtatttgatggcctgtttgagttctgtcagctgtctactggtggctctgtggcaagt
gctgtgaaacttaataagcagcagacggacatcgctgtgaattgggctgggggcctacac
catgcaaagaagtccgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccacggc
gatggcgtggaagaggccttctataccacagaccgagtcatgactgtgtcctttcataaa
tatggagagtacttcccaggaactggggacctacgggatattggagctggcaaaggcaag
tattatgctgttaactaccctctccgagatgggattgacgacgagtcctatgaggccatt
ttcaagccggtcatgtccaaagtaatggagatgttccagcccagtgcagttgtcttgcag
tgtggctctgactccttgtctggggatcggttaggttgcttcaatctgaccatcaaaggg
catgccaagtgtgtggaatttgtgaagagcttcaacctgcctatgctgatgctgggagga
ggtggctacaccattcgtaatgtcgcccggtgctggacatatgaaacagctgtggccctg
gacacggagatccctaatgagcttccatacaacgactacttcgaatactttggaccagat
ttcaaacttcatatcagtccttccaatatgactaaccagaacactaatgagtacctggaa
aagatcaaacagcggctgttcgagaacctaagaatgctgccccacgcgcctggggtccag
atgcaggccatccccgaggacgccattccagaggagagtggtgatgaggatgaagaagac
cctgacaagcgcatctcaatctgttcctcggacaaacgaattgcctgtgaggaagagttc
tccgactctgacgaggagggagaaggcgggcgcaagaactcttccaacttcaagaaagcc
aagagagtcaaaacagaggatgagaaagagaaagatccagaagagaagaaagaagtcaca
gaagaggagaaaaccaaggaagagaagcaagaagccaaaggggtcaaggaagaggtcaag
ttggcctga

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