Bos taurus (cow): 408002 Help Entry 408002            CDS       T01008                                  Symbol ATG4B Name (RefSeq) cysteine protease ATG4B   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism bta  Bos taurus (cow) Pathway bta04136   Autophagy - other bta04140   Autophagy - animal bta04145   Phagocytosis Brite KEGG Orthology (KO) [BR:bta00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     408002 (ATG4B)    04140 Autophagy - animal     408002 (ATG4B)    04136 Autophagy - other     408002 (ATG4B)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:bta01002]     408002 (ATG4B)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bta04131]     408002 (ATG4B)    03029 Mitochondrial biogenesis [BR:bta03029]     408002 (ATG4B) Peptidases and inhibitors [BR:bta01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    408002 (ATG4B) Membrane trafficking [BR:bta04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     408002 (ATG4B) Mitochondrial biogenesis [BR:bta03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     408002 (ATG4B) SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  408002 NCBI-ProteinID:  NP_001001170 Ensembl:  ENSBTAG00000015401 VGNC:  26258 UniProt:  Q6PZ03 LinkDB All DBs Position 3 Genome browser AA seq 393 aa AA seqDB search MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSVLTEKDEILADVASRLWFTYRKNFPA IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYCSVLQAFLDRKD SCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHVAMDNTVVMADIR RLCRSSLPCAGAEAFPADSERHCNGFPAGAEGGGRAAPWRPLVLLIPLRLGLADVNAAYA GTLKHCFRMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVAAADRCPVPDESFH CQHPPGRMSIAELDPSIAVGFFCETEDDFNDWCQQVSKLSLLGGALPMFELVEQQPSHLA CPDVLNLSLDSSDAERLERFFDSEDEDFEILSL NT seq 1182 nt NT seq  +upstreamnt  +downstreamnt atggacgcagctacccttacctacgacacgctccgatttgctgagtttgaggatttccct gagacctcggagcctgtctggatcctcgggaggaagtacagtgtcctcacagaaaaggac gagatcttggctgatgtggcatcgagactctggtttacgtacagaaagaacttcccggcc atcgggggcaccggccccacctcggacacgggctggggctgcatgctgaggtgcggacag atgatcttcgcccaggccctggtgtgccggcacctgggccgcgactggaggtggacgcag cggaagaggcagccggacagctactgcagcgtcctgcaggcgttcctggacaggaaggac agctgctactccatccatcagatagcacaaatgggagtcggcgagggcaagtccatcggc cagtggtacgggcccaacaccgtcgcccaagtcctcaagaagctggctgtcttcgacacc tggagcgccctggctgtgcatgtggcaatggacaacacagtggtgatggcggatatcagg aggttatgcaggagcagccttccctgtgccggggccgaggccttccccgcagactccgag cggcattgcaacggctttccggcaggcgccgagggcggcgggcgcgcggcaccctggaga cccttggtgctgctcatcccgctgcgcctggggctggcagacgtcaacgcggcctacgcg ggcacactcaagcactgcttccggatgccccagtccctgggcgtgatcggagggaagccc aacagtgcccactacttcatcggctacgttggggaggagctcatctacctggacccccac accacgcagccagccgtggcggctgctgaccgctgcccggtcccggacgagagcttccat tgccagcacccgccgggcaggatgagcatcgcggagctcgacccgtctatcgccgtgggg ttcttctgtgagaccgaggatgactttaacgactggtgtcagcaagtgagcaagctgtcc ctgctgggaggcgccctgcccatgtttgagctggtggagcagcagccttcccacctggcc tgtcccgacgtcctcaacttgtccttagactcttctgacgcggagcgactggaaagattc tttgactcagaagacgaagactttgaaatcctgtccctttga

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