Bos taurus (cow): 504307 Help Entry 504307            CDS       T01008                                  Symbol NUP188 Name (RefSeq) nucleoporin NUP188   KO K14311   nuclear pore complex protein Nup188 Organism bta  Bos taurus (cow) Pathway bta03013   Nucleocytoplasmic transport bta05014   Amyotrophic lateral sclerosis Brite KEGG Orthology (KO) [BR:bta00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     504307 (NUP188)  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     504307 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bta03019]     504307 (NUP188) Messenger RNA biogenesis [BR:bta03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      504307 (NUP188) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like HEAT_SCC3-SA DUF4912 Motif Other DBs NCBI-GeneID:  504307 NCBI-ProteinID:  NP_001095308 BGD-bta:  BT18254 Ensembl:  ENSBTAG00000010613 VGNC:  32354 UniProt:  A6QM02 LinkDB All DBs Position 11:99445812..99489021 Genome browser AA seq 1752 aa AA seqDB search MAAAAGGQCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPSSAEK VKASKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQA LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLLHTGFLPFVAHQVSSMSQMISAEGMNA GGYGNLLMNSEQPQGEYGVTVAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK WRYNSHGVREQIGCLILELIHSILNLCHETDLHSSHTPSLQSLCICSLAYTEAGQTVINI MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA LTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDA FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGVWSCLH AVLELIGSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT LSSPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK SLAVHMADTEGSSCTSLVEYQMLVSAWRMFLIIATSHAEITHLTDSAVRRQLFLDVLEGT KALLLVPTSVNCLRLGSMTCTLLLILLRQWKRELGSVDDILGPLTEILEGVLQADQQLME KTKAKVFSAFITVLQMKEMSVNDIPQYSQLVLNVCETLQEEVIALFDHTRHSLAAGSATE DKDSMETDDCSRLRHRDQRDGQVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTT LEVSLRMKQNLHFTEAALHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTVQ TPGTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRT VQSLACLEEADHTVGFLLQLSSFRKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKMLQ HYLQNKNGEGIPSAVAPRAQRPSAAALAAPSCSSSKQPAPDTEASEQRALRTVQYGLLRI LSRTLAALRRFTPDVCQVLLDQSLDLAEYSFLFALSFTTPTFDSEGAPSFGTLLATVNVA LNMLGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHP RDKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGVLPSPQGKSTSLSKVSPESQEPLI QLVQAFVRHVQR NT seq 5259 nt NT seq  +upstreamnt  +downstreamnt atggcggctgccgccggcggtcagtgtgtgaggagcagtagagaactgtggacaattctg ctaggaaggtcagctctgagagaactgaatcagattgaggcagagctgaataaacattgg cagcggctgttagaaggactttcttactataaacctcccagtccaagttcagctgaaaaa gtgaaagctagtaaagatgtagcttcaccactgaaggaactgggtttaagaatcagcaag tttttgggtcttgatgaagaacagagtgtgcagttactccagtgttaccttcaagaggat tacagaggtactcgggactcactaaagacggtgctgcaagatgagaggcagagccaggcc ttaatcctgaagattgcagattattactatgaagaaagaacctgtattcttcgttgtgtc ttacaccttctcacttatttccaagatgaaagacacccctatagggttgaatatgccgac tgtgtggataaattggaaaaggagctagttacaaaatatagacagcagtttgaagagctt tataaaactgaagcaccaacgtgggagacacatggaaacctcatgactgagcgccaggtg tctcgctggtttgttcagtgccttcgggagcagtccatgctgctagaaattattttccta tattatgcatactttgagatggcacctagtgacctattggtgttaaccaagatgtttaaa gagcaaggatttggtagtaggcagactaacaggcacctggtagatgagaccatggatcct tttgtggatcggattggctacttcagtgcccttattctggtggaaggcatggacattgaa tccttgcataagtgtgctttggatgacagaagagaactgcaccagtttgcccaggatgga cttatttgtcaggatatggaccgtttgatgttgacctttggggacattccgcatcatgcc ccagtgcttttggcatgggccctcctccgtcacaccctgaatccagaagagacaagcagc gtggtccggaagataggggggacagccatccaactgaacgtctttcagtacttgacccga ctgctccgctcgctggccagtgggggaaatgactgtaccaccagcactgcctgcatgtgt gtctacggactcctttcttttgtcctgacctccctggagctgcacaccctgggcaatcag caggatgtaattgacacagcatgtgaagtcctggcagacccttctctcccagaactgttc tggggaacagaaccaacctctggtctcgggatcattctggacagtgtatgtggaatgttt ccccatctcctgtctccactcctgcagttgcttcgagcccttgtatcagggaagtctact gctaagaaggtgtatagtttcttggataagatgtctttctacaatgaactctataagcac aagccccatgatgtgatctcccacgaagatggaaccctttggcggaggcaaacacccaaa ctcctttaccctctagggggtcagaccaaccttcgcatacctcaaggcaccgtgggccaa gtgatgctggacgatagggcctacctggtgcgctgggaatactcgtatagcagctggacc ctcttcacctgcgagattgagatgctgctgcatgtcgtttccactgcagatgtgattcag cactgccagcgggtcaaacccatcatcgacctggtccataaggtcatcagtacagacctg tcgatagcagactgtctcctgcccatcacgtcccgcatctacatgctcctgcagcggtta acaacagtgatctccccgcctgtggatgtcatcgcttcttgcgtcaattgcttgactgtt ttggctgcccggaacccagcaaaggtctggactgatcttcttcacacaggcttcttgcct ttcgtggcccaccaggtctccagcatgagtcagatgatcagtgctgaggggatgaatgct ggtgggtatggaaacctcttgatgaatagtgaacagccccagggcgagtatggggtcact gttgcctttctgcgcttgatcaccactcttgtgaaggggcagcttggtagtacccagagc caagggctggtgccttgtgtcatgtttgtgctgaaggagatgctgccaagttaccacaag tggcgatacaactcccatggtgtgagagaacagattggttgcctgatcctggagctgatt cattcaatactgaacctgtgccatgagacagacctgcatagcagtcacacccccagcctg cagtctctctgcatctgcagcctggcctacacggaagcaggacagacagtaatcaatatc atgggcatcggtgtggacaccatcgacatggtcatggctgctcagccccgcagcgatggg gcagagggccagggccagggccagctgctgatcaagacagtgaagttggcgttctctgtc accaacaatgtcattcggctgaaaccgccttctaatgtggtgtcccctctggaacaggct ctcacacagcatggtgcccatgggaacaaccttattgctgttcttgccaaatacatctac cacaaacacgacccagctctgcctcgtcttgctatccagctgctgaaacgtctggccacg gtggcgcccatgtcagtgtacgcctgcctgggcagtgatgcggctgccatccgagacgcc ttcctgacccgcctgcagagcaagattgaggatatgcgcatcaaagtcatgattctggaa ttcctcacggttgctgtagagacgcagccaggcctcattgaactgtttctgaatctggag gtgaaggatggcagcgatggctccaaggaattcagcctcggggtgtggagctgtctccac gcggtgctggagctgatcggttcccagcagcaggaccgctactggtgccccccactgctg caccgggcagccatcgcctttttgcacgccctgtggcaggaccggcgggacagtgccatg ctggtcctcagaaccaaacccaagttttgggagaatctaacgagtccgctatttggtacg ctttcttctccctcggaaacatctgagcccagcatcctggaaacctgtgccctaatcatg aagataatttgcttggagatatactatgtagttaagggctcattagaccaatcattaaaa gatacactcaagaaattttccagcgagaagcgctttgcctactggtcggggtatgtcaag tccttggcagttcacatggccgacacagagggcagcagctgcacctccctggtagagtat caaatgctggtctctgcctggaggatgtttctcatcattgccaccagtcacgcggagata acgcacctgacagactctgcagtgcgtcgccagctctttcttgacgtgctcgaggggacc aaggcgttgctcctcgtccctacctccgtgaactgcctccgcctgggctccatgacgtgc accctgctgcttattctcctccggcagtggaagagagagttagggtctgtggatgacatc cttgggcccctgacggagatcctggagggagtgctgcaggcagaccagcagcttatggag aagaccaaggccaaggtgttctcggcgttcatcacggtgctgcagatgaaggagatgagc gtgaatgacatcccccagtactcccagctggtgctgaacgtctgtgagacccttcaggaa gaggtgatcgcacttttcgaccacacccgccacagcctggcggcgggcagtgccaccgag gacaaggacagcatggagaccgacgactgctcccggctccggcacagggaccagcgggat gggcaggtctgtgtcctgggcctgcacctggccaaggagctgtgtgaggtggatgaggac ggggactcgtggctacaggtgacccgccggctccccatcctgccgaccctcttcaccacc ttggaggtgagccttcgcatgaagcagaacctgcacttcaccgaggcggcgctgcacctg ctcctcacactggcccgcacccagcagggggccacggctgtggccggagccggcatcacc cagagcatttgtttgcctctcctgagtgtgtaccagctcagcaccaacgggacagtgcag acacccggcacctctcggaagtccctggacgccccttcttggcctggcgtctaccgtctc tccatgtccttgatggagcggctcctcaaaaccctgcgctacaacttcctgaccgaggcc ctggacttcgtgggggttcaccaggagcggaccttacagtgcctcaacgccgtgaggacg gtgcagagtctggcgtgcctggaggaggccgaccataccgtgggcttcctcctacagctc tccagcttcaggaaggagtggcacttccacctgcctcagctcatgcgggatgtccaggtg aacctcggctacctgtgccaggcctgcacctccctcctgcacagccgcaagatgctgcag cactacttgcagaacaaaaatggggagggcatcccctcagctgttgccccccgagctcag cggccatccgcagctgccctggctgccccctcctgctcctcctccaagcagcccgctcct gacacggaggcctcagagcagcgggccttgcgcaccgtccagtatggcctcttgaggatc ctcagcaggaccctggccgccctgcgccgcttcacccccgatgtctgccaggtcttgctg gatcagtccctggaccttgctgagtacagcttcctgtttgccctgagcttcaccactccc acttttgactccgaaggggccccctccttcgggacccttctggccactgtgaatgtggcc ctgaacatgcttggagagctggacaagaaaaaggagcctctcacccaggctgtggggctc agcacacaagcagaagggaccagaactctgaagtcgctcctgatgttcaccatggagaac tgcttctacctgctcatctcccaggcgatgcgttaccttcgggacccggctgtgcacccc cgggacaagcagcggatgaagcaggagctcagctcagagttgagcactctcctctccagc ctctcccgctacttccgccggggagcccccagctcccctgctgctggcgtccttccctcg cctcagggcaagtccacctctctctccaaggtcagccccgagagtcaggagcctctgatc cagctggtgcaggcctttgtccgacacgtgcaaagatag

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