KEGG   Bos taurus (cow): 504637
Entry
504637            CDS       T01008                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
bta  Bos taurus (cow)
Pathway
bta03030  DNA replication
bta03410  Base excision repair
bta03420  Nucleotide excision repair
bta03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    504637 (RFC4)
   03410 Base excision repair
    504637 (RFC4)
   03420 Nucleotide excision repair
    504637 (RFC4)
   03430 Mismatch repair
    504637 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bta03032]
    504637 (RFC4)
   03036 Chromosome and associated proteins [BR:bta03036]
    504637 (RFC4)
   03400 DNA repair and recombination proteins [BR:bta03400]
    504637 (RFC4)
DNA replication proteins [BR:bta03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    504637 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    504637 (RFC4)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    504637 (RFC4)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     504637 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    504637 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_assoc_2 DUF815 AAA_16 AAA_22 AAA_11 AAA_30 AAA_24 Mg_chelatase AAA_28 RuvB_N SLFN-g3_helicase AAA_19 AAA_5 ResIII Viral_helicase1 AAA_7 DUF6096
Other DBs
NCBI-GeneID: 504637
NCBI-ProteinID: NP_001039359
BGD-bta: BT21534
Ensembl: ENSBTAG00000014727
VGNC: 33888
UniProt: Q29RS9
LinkDB
Position
1:80452903..80467446
AA seq 337 aa
MQAFLKGASISTKPPPTKDRGVTATARSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIADKEHVKISNEGIAYLVQVSEGDLRK
AITFLQSATRLTGGKEVTEKVITDIAGDLINEGHAATQLVNQLHDVVVENDNLSDKQKSI
ITEKLAEVDKCLADGADEHLQLISLCATVMQQLTQNC
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgcaggcgtttctaaaaggcgcatctatcagcactaaaccaccgccgactaaggatcga
ggagtaactgccactgccagaagtagtggagagaacaagaaagccaaacctgttccatgg
gtggaaaaatatcgaccaaaatgtgtggatgaagttgctttccaggaagaagtggttgca
gtccttaaaaagtctttagaaggagctgatctacctaatctcttgttttacgggccacct
ggaactggaaaaacatcaactattttggcagcagctagggaactcttcgggcctgaactt
tttcgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtagttaga
gagaaagttaagaattttgcccaattaactgtgtcaggaagccgttcagatggaaagcca
tgtcctccttttaaaattgtgattctggatgaagcagattctatgacctcagctgctcag
gcagctttaagacgtaccatggagaaagagtctaaaaccaccagattctgtctcatctgt
aactatgtcagccgaataattgaacctctgacctctagatgttctaaattccgcttcaaa
cctctgtcagataaaattcagcagcagcggttactagacattgctgataaagaacatgtc
aaaattagcaatgagggaatagcttatcttgttcaagtgtcagaaggagacttaagaaaa
gccattacatttcttcaaagtgctactcgactaactggtggaaaggaagtcacagaaaaa
gtgatcacagatattgctggggacttaataaatgagggtcatgcagcaactcaacttgta
aatcaactccatgatgtggtggtagaaaatgataacctttctgataaacagaagtctatt
attacagaaaaacttgctgaagttgataaatgcttagcagacggtgctgatgaacatctg
cagctgatcagcctctgtgctactgtgatgcagcagttaactcagaattgctaa

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