Bos taurus (cow): 504797
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Entry
504797 CDS
T01008
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X2
KO
K26583
transcriptional-regulating factor 1
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
504797 (TRERF1)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
504797 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
zf-C2H2
ELM2
zf-C2H2_4
Myb_DNA-binding
zf-met
zf-C2H2_2
Myb_DNA-bind_7
Zn_SUZ12
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
504797
NCBI-ProteinID:
XP_005223596
Ensembl:
ENSBTAG00000015321
VGNC:
36302
LinkDB
All DBs
Position
23:complement(15936466..16146766)
Genome browser
AA seq
1209 aa
AA seq
DB search
MGDQQLYKTNHVAHGGENLFYQQPPLGVHGGLNHSYGNTVPGAGMDAPQASPISPHFPQD
TRDGLGLAVGSKNLGQVDTSRQGGWGGHAGPGNHVQLRGNLTNSNMMWGAPAQAEPTDGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSA
LRQLLSQKPMEAPAAALPSRYQQASQQPHPGFTGGLSKPALQVGQHPSQGHLYYDYQQPL
AQMPVQGGQSLQAPQMLSQHMQQLQPHQYYPPQQQTHAGQQRVSMQEMQPPPQQQIRPPQ
PQPQPQPRQGSMQIPQYYQSPPMIQPLPEPQQPQMHLQPSSYHRDPHQYTPEQAHAVQLI
QLGSMPQYYYQEPQQPYGHPVYQQSHLPQHQQPEDGQPKTYPGDRQAQAMLSSHGDLGPP
DTGMGDAASSDLNRASSALPHRPLLSPGSIHLNNMGSQHQQLSPSAVWPQMHLPDGRAQP
GSPESSGQPKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRASPSLKQEEGE
KAPAPPPQPQPPLPPPPPPPQLPPEAESLTPMVMPVSVPVKLLPPKPSSQGFANSVAAAP
SARDKPASSMSDDEMPVLVRMTLSPPHSPQGAAPNPPAEIPKKHQPGAAKAEEALRSAPA
EKKKFRHRPEPLFIPPPPSYTPNLAASHSGATLYQSQLRSPRVLGDHLLLDPAHELPPYT
PPPMLSPVRQGSGLFSNVLIAGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSNLTVTPG
PGEQTVDVEPRINIGLRFQAEIPELQDVSALAQDTHRATLVWKPWPELENHDLQQRVENL
LNLCCSSALPGGGTNSEFALHSLFEAKGDVMAALEMLLLRKPVRLKCHPLANYHYAGSDK
WTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLSEII
DDCVTSEEDEEVEEEEDPEEDRKSTREEESELPKSPEPPQGPVLAPAEGPPLQALGQPSG
SFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKARGTVPSGKQKPGSAQSGYCSVKSSP
SHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEMAAT
IERTTGPVGPQGLLPLDQLSLIKPIKDVDLLDDDVVQQLGGVMAEAEVVDTGLLLDDQAS
VLLQGDTEL
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccagcagctatacaagaccaatcatgtggcccacggtggtgagaaccttttc
taccaacagccaccacttggcgtccacggcgggctgaaccacagctatgggaatacagtg
cccggggctggaatggatgcccctcaggcatcacccatctccccccacttccctcaagac
actcgggatggtctaggcttggctgttggctccaaaaaccttggccaagtggatacctcg
aggcagggagggtggggaggccacgcagggcctggaaaccatgtccagctacgtggaaac
ctgaccaattcgaacatgatgtggggggcgccggcccaggcggagcccaccgatggctac
cagtacacctactcgcaggccagcgagatccggacccagaagctcaccagcggtgtcctg
cacaagctagactctttcacccaggtgtttgccaaccaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacacccagtcagcagtaatggatggagcgcccgacagcgcc
ctccgccagttgctgtcccagaagcccatggaggccccagcagcggctctcccgtcgcgc
taccagcaggcgtcccagcagcctcaccctggtttcactggtgggctgtccaaaccggct
ctccaggtcgggcagcacccgagccaagggcacctgtattacgactaccagcagccgctg
gcccaaatgccggtgcagggcggacagtcgctgcaggccccccagatgctatcccagcac
atgcagcagctgcagccgcatcagtattacccaccgcagcaacagacacacgccgggcaa
cagcgggtgtccatgcaagaaatgcagccgccaccacaacagcagattcgcccgccccag
ccccagccgcagccgcagccgcggcagggttcaatgcagatacctcagtattaccagtcc
ccacccatgatacagcctttgccagagccgcagcagccccagatgcacctacagccctct
tcttatcatagggacccccatcaatacaccccagagcaggcgcatgcagtccagctgatt
cagctgggctccatgccccagtactactaccaggagccccagcagccctacggccacccc
gtgtaccagcagagccacctgcctcagcaccagcagcctgaggatggtcagcccaagact
tatccaggcgacaggcaggcccaggccatgctgagctcccacggggacctgggacctcca
gatacaggaatgggagacgcagccagctccgacctgaaccgggccagcagtgccctcccg
caccggccgctcctgtcccctggcagcatccacctcaacaacatggggtctcagcaccag
cagctgtctcccagtgccgtgtggccccagatgcacctacctgatggccgagcccagcca
gggtctcctgagtcaagtggccaacccaaaggagtgtttggggagcagtttgatgccaag
aacaagctgacatgctccatctgcctgaaggagttcaagagcctgcccgccctgaatggc
cacatgcggtcccatggggggatgagggcctcccccagcctcaaacaggaggaaggagag
aaggccccggcgcctccgcctcagccccagccgccactgccgcctccgccgccgccacct
cagctccctcccgaggcggaaagcctcacgcctatggtcatgcccgtgtctgtccctgtc
aagcttctcccgcccaagcccagctctcagggcttcgccaacagcgtcgctgccgccccc
tcggccagagacaagccagccagctcgatgtcggacgacgagatgcccgtgctcgtgagg
atgaccctctctcccccacactcgccccaaggggctgcccccaacccgcctgctgaaatt
cccaagaagcaccagccaggcgcggccaaagccgaggaagccctcaggagcgcgccagca
gagaagaagaagttccggcaccggccggagccgctcttcatcccgccaccgccctcctac
acgcccaacctcgccgcctcgcactcgggcgccaccctgtaccagagccagctgcgctcc
ccacgggtgctgggcgaccacctgctcctggaccccgcccacgagctgcccccctacacg
cccccgcccatgctcagcccggtgcgccagggctcggggctcttcagcaacgtgctcatc
gccggccacggccccggcgcccacccgcagctgcccctcacgcccctgacgcccacgccg
cgcgtgctgctctgccgctccaacagcatcgatggcagcaacctgacggtcaccccgggg
cctggagagcagaccgttgatgtcgaaccacgcatcaacattggcttgcgattccaagcg
gagatcccagaactccaggatgtctctgccctggcccaggacacacacagggccacacta
gtatggaagccctggccagagctggaaaaccacgacctccagcaaagagtggagaatctc
ctgaatttatgctgttcaagtgcgttgccaggtggagggaccaattctgaatttgctttg
cactctctcttcgaggccaaaggtgatgtgatggctgctctggaaatgctgctgttgcgg
aaaccagtcaggttaaaatgtcatcctttagcaaattaccactatgccggttcggacaag
tggacctccctagaaagaaaactgtttaataaagcactagccacttacagcaaagacttt
atttttgtacagaagatggtgaagtccaagacggtggctcagtgtgtggagtactattac
acgtggaaaaaaatcatgaggttggggaggaaacaccggacacggctctcagaaatcatc
gatgactgtgtgacgagtgaagaagatgaagaggtagaggaggaggaggatccggaagaa
gacaggaaatccacaagagaagaggagagtgaattgcccaagtccccggagccgccgcaa
ggcccggtcctggctcccgcagaggggccgcccctgcaggccctgggccagccctcgggc
tccttcatctgtgaaatgcccaactgcggggcggtgttcagctcccggcaggcactgaac
ggccacgcccgcatccatggtggcaccaaccaggtgaccaaagctcggggcactgttccc
tctgggaagcagaagcctggcagtgcccagagtgggtactgctcggtgaagagctcaccc
tcccacagcaccaccagcggcgagacagaccccaccaccatcttcccctgcaaagagtgc
ggcaaagtcttcttcaagatcaaaagccgaaatgcacacatgaaaactcacagacagcag
gaggaacagcagaggcagaaagctcagaaggcggcgttcgcggccgagatggcagccaca
atcgagaggactacggggccggtggggccgcaggggctgctgcccctggaccagctgagt
ctgatcaaacccatcaaggacgtggacctcctcgatgacgacgtcgtccagcagctagga
ggcgtcatggcagaggccgaggttgtggacaccggtctcctcctggatgatcaggcttca
gttttgcttcagggtgacacggaactctaa
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integrated database retrieval system
