Bos taurus (cow): 505229
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Entry
505229 CDS
T01008
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
bta
Bos taurus (cow)
Pathway
bta03082
ATP-dependent chromatin remodeling
bta04714
Thermogenesis
bta05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
505229 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
505229 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
505229 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
505229 (ARID1B)
03021 Transcription machinery [BR:
bta03021
]
505229 (ARID1B)
03036 Chromosome and associated proteins [BR:
bta03036
]
505229 (ARID1B)
Transcription factors [BR:
bta03000
]
Eukaryotic type
Helix-turn-helix
ARID
505229 (ARID1B)
Transcription machinery [BR:
bta03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
505229 (ARID1B)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
505229 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
505229
NCBI-ProteinID:
XP_024852869
VGNC:
26124
LinkDB
All DBs
Position
9:93404984..93845453
Genome browser
AA seq
2446 aa
AA seq
DB search
MAARAAAAARAGSGERRAPPGPRPAPGARDLEAGARGAAAPGPMLGGGDGSGLSNVHHHP
LHPRHELNMAHNASAAAAVAASTNSAKSGGSEAEGGSATALSSSSSSSSAAAAAAASSSS
SSSGPGSAMETGLLPNHKLKTVGEAPAAAPHQQQHHHHHHHHHAHHLQHHHHHHAHHLHH
LHHHALQQQLNQFQQQQQQQPQQQQQHQHPISNNNSLGGAGGGTPQPGADMEQPQHGGAK
DGAAAGSQAEPPGQPLLSKPGDEDDAPPKMGEPAGGRFEQPGLGALGAQQQQQPPPPVAV
PGGGGGGGGGPAAVSEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGLMHSASAAA
GAPNSMDPLQNSHEGYPNSQYNHYPGYSRPSAGGGGGGGGGGGGGGGGGSGGGGGGGGGA
GGAGAVAAAAAAAAAAAAAGGGGGGYGGSSSGYGVLSSPRQQGGGMMMGPGGGGAASLSK
AAAGAAAAAAAAAATGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPDYSSPS
APPPPPPPSQPQSQAAAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA
MSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPI
GIQGRPPGAMGGMQYPQQQMPAQYGQQGVSGYCQQGQQPYYNQQPQPPHLPPQAPYLPSQ
SQQRYQPQQDMSQEGYGTRSQPPLASGKPNHEDLNLIQQERPSSLPVEVLTSEDTAFGLK
DLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSP
VGSPVGSNQSRSGPISPASIPGSQMPPQPPGNQSESSSHPALSQSPMPQERGFMAGTQRN
PQMSQYGPQQTGPSMSPHPSPGGQMHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTY
SGVPSASYSGPGPSMGVNANSQMHGQGPSQPCGAMPLGRVPSAGMQNRPFPGNMSSMTPS
SPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRP
MFSSQHPNYGNSQAPMMHQPDQYGQGGFPGMNQSGLMASSSPYSQPMNNSSGLMNTQAPP
YSMTPNMVNSSTASMGLADMMSPSESKLPLPLKADGKEEGSTQPEGKSKDSYSSQGISQP
PTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYEL
GNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWR
ELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSP
ANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTVSVHDPFSDA
SESSFPKRNSMTPSTPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPT
SSMQDMYNQSPSGAMSSLGMGPRQQFPYGTSYDRRHEPYGQQYPGQGPPSGQPSYGGHQP
GLYPQQTNYKRHMDGMYGPPAKRHEGDMYNMQYGSQQQEMYNQYGSSYSGPDRRPLQGQY
PYPYNRERMQGPGQIQPHAIPPQMMGGPMQSSSNEGPQQSMWATRNDMPYPYQNRQGPGG
PTQAPPYPGINRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQSSYQTP
PSLPNHISRAPSPASFQRSLESRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIR
REITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLY
DDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILTEYEVGDPSQKALDHNAAKRDDSQS
LADDSGREEEDAECIEEEEDEEDEEEEDSGRAETEDRSSAAVASPDATTDLKEKPRQASK
FDKLPIKIVKKNNLFVVDRSDKLGRVQEFSSGLLHWQLGGGDTTEHIQTHFESKMEIPPR
RRPPPTLSSTGRKKDQEGKGDSDEHQEKSIIATIDDVLSARPGALPEDANPGTQTESSKF
PFGIHQARSHRNIKLLEDEPRSRDEAPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDA
EMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDN
TLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVL
ETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDA
LAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALL
AMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7341 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgggcagcagcagcagcgcgggcgggcagcggcgagcggcgggcgcccccg
gggccgcggccggcgcccggggcccgggacctggaggcgggggcgcgcggcgcggcggca
ccgggacccatgctggggggcggcgacggcagcggcctgagtaatgtgcaccaccacccc
ctgcacccccgtcacgaactgaacatggcccataacgcgagcgccgcggccgcggtcgca
gccagcactaacagcgccaagagcggcggctccgaggcggagggtggaagcgccaccgcg
ctgtcctcctcctcctcctcctcctccgccgccgcggcggctgcggcgtcctcctcttcc
tcctcgtcgggcccgggctcggccatggagacggggctgctccccaaccacaaactgaaa
accgttggcgaagcccccgccgcagcgccccaccagcagcagcaccaccaccaccatcac
caccaccatgcccaccacctccaacaccaccaccaccaccatgcccaccacctccaccac
ctccaccaccacgcactacagcagcagctaaaccagttccagcagcagcagcagcagcaa
ccacagcagcagcagcagcaccaacatcccatttccaacaacaacagcctcggcggcgcg
ggcggcggcacgcctcagcccggtgccgacatggagcagccgcaacatggaggcgccaag
gacggtgccgctgcgggcagccaggccgagcccccgggccagccgctgctgagcaagccg
ggcgacgaggacgacgcgccgcccaaaatgggggagccggcaggcggccggttcgagcag
ccgggcctgggcgccctgggcgcgcagcagcagcagcagccgccgccgccagtcgccgtg
cccgggggcggcggaggcggcggcggcggcccggcggccgtctcggagtttaataattac
tatggcagcgctgccccagctagcggcggccccggcggccgcgctgggccttgctttgat
caacatggcggacaacaaagccccgggatggggctgatgcactccgcctcagctgccgcc
ggagcccccaacagcatggaccccctgcagaactcccacgaagggtaccccaacagccag
tacaaccattatccgggctacagccggcccagcgcgggcggcggcggcggcggcggcggc
ggtggaggaggaggaggaggaggaggcagcggaggaggaggaggaggaggaggaggagca
ggaggagcgggagctgtggcggcggcggccgcggcggcggcggcagcagcagcagcagga
ggcggcggcggcggctatgggggctcgtcctcggggtacggggtgctgagctccccccgg
cagcagggcggcggcatgatgatgggccccgggggcggcggggccgcgagcctcagcaag
gcggccgccggcgcggcggcggcggcggcggcggcggcggcgacggggggcttccagcgc
ttcgccgggcagaaccagcacccgtcgggggccaccccgaccctcaaccagctgctcacc
tcgcccagccccatgatgaggagctacggcggcagctacccggactacagcagccccagc
gcgccgccgccgccgccgccgccgtcgcagccccagtcccaggcggcagcggcggcggcg
ggggcggcggcgggcggccagcaggcggccgcgggcatgggcttgggcaaggacatgggc
gcccagtacgccgctgccagcccggcctgggcggccgcgcaacaaaggagccacccggcg
atgagccccggcacccccggcccgaccatgggcagatcccagggcagcccaatggatccc
atggtgatgaagagaccccagctgtatggcatgggcagtaaccctcattctcagccacag
cagagcagcccttaccctggaggttcctatggccccccaggcccacagcggtatccaatc
ggcattcaaggtcggcccccgggggccatgggaggcatgcagtacccccagcagcagatg
ccagctcagtacggacagcagggtgtgagtggttactgccagcagggccagcagccttac
tacaaccagcagccgcagcctccgcaccttcccccgcaggcgccatatctgccctcccag
tcccagcagaggtaccagccgcagcaggatatgtctcaggaaggctatggaactaggtct
caacctcctctggcttctggaaaacctaaccatgaagacttgaacttaatacaacaagaa
agaccatcaagtttaccagttgaagtcttgacctcggaggatactgcctttggactcaag
gacctgtctggctccattgatgacctccccacgggaacggaagcaactttgagctcagca
gtcagtgcatctgggtccacgagcagccaaggagatcagagcaacccagctcagtcacct
ttctctccgcatgcatctccccatctctccagcatccctgggggcccatcgccttctcct
gtcggctctcctgtaggaagtaaccagtcacgatctggcccaatttctcctgccagtatt
ccaggaagtcagatgccccctcagccacctgggaaccagtcagaatccagttctcatcct
gccttgagccagtcaccaatgccacaggaaagaggttttatggcaggcacacaaagaaac
cctcagatgtctcaatatggacctcagcagacaggaccatccatgtcgcctcatccttct
cctggaggccagatgcaccctggaatcagtagctttcagcagagtaactcaagtggaact
tacggtccacagatgagccagtatggaccacaaggtaactactccagacccccaacatac
agtggggtgcccagtgcaagctacagcggcccagggcccagcatgggcgtcaatgccaac
agccagatgcatggacaagggccaagccagccgtgtggtgccatgcccctgggacgagtg
ccatccgcaggcatgcagaacagaccatttcctggaaacatgagcagcatgacccccagt
tctcctggcatgtctcagcagggggggccaggaatggggccaccaatgccaaccgtgaac
cgtaaggcacaggaggcagctgctgcagtgatgcaggccgctgcgaactcggcgcaaagc
aggccaccatacattaggtcgcctgcttatcccagccagtctggggctggcggacgcccc
atgttttcttcccagcaccccaactatggcaactctcaggctcccatgatgcaccagcct
gaccagtacgggcaaggcggctttcctggcatgaatcagagtggactcatggcttccagc
tcaccctacagccagcccatgaacaacagctctgggctaatgaacacccaggcgcccccc
tacagcatgacgcccaatatggtgaacagctcaacagcatctatgggtcttgcagatatg
atgtctcctagtgaatccaaactgcccctgcccctcaaagccgacggtaaagaagaaggc
agcacacagccggagggcaagtcgaaggatagctacagctctcagggtatttctcagccc
ccaacccccggcaacctgccagtcccttccccaatgtcccccagctctgctagcatctcc
tcatttcatggagatgaaagtgatagcattagcagcccaggctggccaaagactccatca
agccctaagtccagctcatccaccaccactggggaaaagatcacaaaggtgtatgagctg
gggaatgagccagagaggaagctgtgggtggaccgctacctcaccttcatggaggagagg
ggctccccggtctcaagtctgcctgcagtgggcaagaagcccttggacctgttccgactc
tatgtctgcgtcaaagagatcggaggtttggcacaggttaataaaaacaagaagtggcgt
gagttggcaaccaacctaaatgttggcacttcgagcagtgcagcaagctccctgaaaaag
cagtatattcagtacctgtttgcctttgagtgcaagatcgagcgtggggaggagcccccg
ccggaagtcttcagcacgggcgacaccaagaagcagcccaagctccagccgccatctcct
gctaactcaggatccttgcaaggtccacagaccccccagtcaactggcagtaattcgatg
gcagaggttccaggtgacctgaagccgcctactccagcctccacccctcatggacagatg
accccaatgcaaggtggaagaagcagcactgtcagtgtgcacgacccattctcagacgca
agtgagtcatcgttccccaaacgcaactccatgactccaagcaccccgtaccagcagggc
atgagcatgccagacgtgatgggcaggatgccctacgagcccaacaaggacccctttggg
gggatgaggaaagtgcctggaagcagcgagcctttcatgacgcaaggacagatgcccacc
agcagcatgcaggatatgtacaaccagagtccatctggagccatgtctagtcttggcatg
gggccacggcagcagtttccctacggaaccagttatgaccgaaggcatgaaccttatggg
cagcagtacccgggccaaggccctccctcaggacagccgtcatatggaggacaccagcca
ggcctgtacccacagcagacgaactacaagcgccatatggatggcatgtatgggcctcca
gccaaacgccacgagggagacatgtacaacatgcagtatggcagccagcagcaggagatg
tacaaccagtacgggagctcctactccggcccggaccggaggcccttgcagggacagtat
ccttacccctacaaccgagagaggatgcagggcccggggcagatacagccacatgccatc
cctccgcagatgatgggcggcccgatgcagtcgtcctccaacgaagggcctcagcagagc
atgtgggcgacccgcaacgatatgccttatccctaccagaacaggcaaggccctggcggc
cccacgcaggccccgccttaccccggcataaaccgcaccgatgacatgatggtccctgat
cagaggataaaccacgagagccagtggccttcccacgtcagccagcgtcagccttacatg
tcctcgtcagcctccatgcagcccatcacgcgcccgcctcagtcgtcctaccagacgcca
ccctcactgccaaaccacatctccagggcgcccagccccgcctccttccagcgctccctg
gagagccgcatgtctcccagcaagtcccccttcctcccctccatgaagatgcagaaggtc
atgcccaccgtccccacgtcccaggtcaccgggccacccccccagccgccccccatcaga
agggagatcaccttccctcctggctccgtggaagcctcacagccagtcctgaaacaaagg
cggaagattacctcaaaagatatcgttactccagaggcctggcgtgtgatgatgtccctt
aagtcaggtctcttggctgaaagtacttgggctttggacactattaatattcttctctat
gacgacagcactgtcgctactttcaatctctcccagttgtccggatttctcgaactttta
gtagagtatttcaggaaatgcttgattgacatttttggaattcttacggaatatgaagtg
ggagaccccagccaaaaagcacttgatcacaatgcagcaaagagagatgacagccagtcc
ttagccgacgattctgggagagaggaagaagatgctgaatgtattgaggaggaggaggat
gaggaggacgaggaggaggaagacagtgggagggcggagacggaggacaggagcagtgca
gctgtggcctcccccgatgccaccacagatctaaaggagaagcccaggcaagccagtaaa
tttgacaagctgccaatcaagatagtcaaaaagaacaacctgtttgtcgtcgaccgctct
gacaagctgggtcgcgttcaggagttcagcagtggacttctgcactggcagctcggcggg
ggagataccactgagcacatccagactcacttcgagagcaagatggagattcctcctcgc
aggcggccgcctcccactttgagctccacaggcagaaagaaagaccaggaaggcaaaggg
gattctgacgagcaccaagagaaaagcatcatcgcaaccattgatgatgtcctatctgct
cggccaggggctctgcctgaagacgcaaaccctggtacccagaccgaaagcagcaagttt
ccctttggaatccatcaagccagaagtcaccgcaacatcaagctgctggaggacgagcca
aggagccgggacgaggccccgctctgcaccatcgcacactggcaggactcgctggccaag
cgctgcatctgcgtgtccaatattgtccggagcttgtcttttgtgcctgggaatgacgcg
gaaatgtccaaacacccgggcctggtgctgatcctggggaagctgattcttcttcaccac
gagcatcccgagagaaaacgagcgccgcagacctacgagaaggaggaagacgaggacaaa
ggggtggcctgcagcaaagatgagtggtggtgggactgcctcgaggtcttaagggacaac
acgctggtcaccttggccaacatttctgggcagctagacttgtccgcttacacggaaagc
atctgcttgccaattttggatggcttgctgcactggatggtgtgcccatcagcagaggca
caagacccctttcccacggtgggacccaactctgtcctgtcgcctcagagactcgtgctg
gagacgctctgtaaactcagcatccaggacaacaatgtggacctgatcttggccacgcct
ccgtttagtcgtcaggagaaattctatgccacgttagttaggtacgttggggatcgcaaa
aacccagtctgtcgagaaatgtccatggcgcttttatcgaaccttgcccaaggggacgca
ctggctgcaagggccatagctgtccagaagggaagcatcggaaacttgataagcttccta
gaggatggggtcacaatggcccagtatcagcagagccagcacaacctcatgcacatgcag
cccccgcccctagagccccctagcgtggacatgatgtgcagggcggccaaggctctgctg
gccatggccagagtggacgagaaccgctccgagttccttctgcacgagggccgattgctg
gatatctcaatatcagccgttctgaactctctggtggcatctgtcatctgcgatgtactg
tttcagatcgggcagttatga
DBGET
integrated database retrieval system
