Bos taurus (cow): 505556
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Entry
505556 CDS
T01008
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
bta
Bos taurus (cow)
Pathway
bta00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
505556 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bta01007
]
505556 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bta03016
]
505556 (VARS1)
Enzymes [BR:
bta01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
505556 (VARS1)
Amino acid related enzymes [BR:
bta01007
]
Aminoacyl-tRNA synthetase
Class I (U)
505556 (VARS1)
Transfer RNA biogenesis [BR:
bta03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
505556 (VARS1)
Prokaryotic type
505556 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
tRNA-synt_1e
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
505556
NCBI-ProteinID:
XP_024839848
BGD-bta:
BT11215
Ensembl:
ENSBTAG00000005631
VGNC:
36765
LinkDB
All DBs
Position
23:27533360..27546153
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AA seq
1320 aa
AA seq
DB search
MDPGTGRRLHRVALSQPLPRLSARRRPPSRPRTRAGCPRRRLTGSRFPGASSSRHPRAHA
PRHSSGARSAAGGVTAPRPGCSRTAPAHAGGARSPAPGPAGPETLAVTKGGTRGRRRPGR
LSQGARVAQRTARRPWSPDSSAAAARPVQLRPAPGYEVDVRLSVTTSLQVFLPRSDIPRN
HVHSAALAALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPSARRIWG
NVTRWFITCVQQPEFRAVLGEVVLYSGARSLSQQPGSEVPAPPKTAAQLKKEAKKREKLE
KFQQKQKVQQQQPPPGEQKKPKPEKREKRDPGVITYDLPTPPGEKKDVSGTMPDSYSPQY
VEAAWYPWWEQQGFFRPEYGRSSVSAPNPRGIFMMCIPPPNVTGSLHLGHALTNAIQDSL
TRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLQEVWKWKEEKG
DRIYHQLKKLGSSLDWNRACFTMDPKLSAAVTEAFVRLHEEGIIYRSTRLVNWSCTLNSA
ISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSNDEVVVATTRIETMLGD
VAVAVHPKDPRYQHLKGKSVIHPFVSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVG
QRHGLEAVSIMDARGALVNVPPPFLGLPRFEARKAVLAALKEQGLFRGIEDNPMVVPLCN
RSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDWCISRQ
LWWGHRIPAYFITVNDPAVPPGEDPDGRYWVSGRTEAEAREKAAKEFCVSPDKISLQQDE
DVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKL
PFKEVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVTLQGLHDQLLNSNLDPSEVEKAKE
GQKADFPTGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFALRGL
GKGFVPSPTSEPGGRESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLYELCD
VYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTPQAPP
SLCVTAYPEPSECSWKDPEAEAAFELALSITRAVRSLRADYNLTRIRPDCFLEVADEATG
ALASAVSGYVQTLASAGIVAVLALGASAPQGCAVALASDRCSVHLQLQGLVDPARELGKL
QTKRDEAQRQAQRLRERRAASGYTVKVPLKVQEADEAKLQQTEAELRKVDEAIALFQKML
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggaccccggtaccgggcgccgtctgcatcgggtagcgctctcccagccgcttccccgg
ctgtccgctcggcgccgccctccctcccggccgaggacccgcgcggggtgtccgcggcgg
cgcctgacggggtcgcggttcccgggggcgtcctcctcccgccacccccgtgcccacgcc
ccgcgccattcctcaggagcgcgatctgcagcgggcggcgtgaccgcccccaggccaggg
tgcagcaggaccgcgcccgcacacgcaggcggggcacggtcgcccgcgccaggacccgcg
ggcccggaaacgctcgcagtcacaaagggggggacacgtgggcgccgacggcccgggcgg
ctgtcgcagggagctagggtcgcccagagaaccgcccgccgtccctggtcgccggattcc
tcggctgcagccgccaggccagtccagcttcggccggcgcccggctatgaggtggatgtc
cggctcagtgtgaccacctccctccaggtttttctaccgcgttcggacatcccgcgtaac
catgtccattctgctgcactggcggccctgggcagagccctgagtcccttggaagaatgg
cttcgactgcatacctacctggccggggaggccccaactctggctgacctggcagctgtc
acagccttgctgctgcctttccgttatgtcctggacccctctgcccgccggatctggggt
aatgtgactcgctggtttatcacatgtgttcagcagccagaattccgggccgtactggga
gaagtggttctgtattcaggggccaggtctctctcccaacagccaggctctgaggtccct
gcaccccccaaaacggctgctcaactcaagaaagaggcaaagaaacgggaaaaactagag
aaattccagcagaagcagaaagtccaacagcagcagccaccccctggggagcagaagaaa
ccaaaaccagagaagagggagaaacgggatcctggggtcattacctacgatctcccgacc
ccacctggggaaaagaaagatgtcagtggcaccatgcctgactcctacagccctcagtac
gtggaggctgcctggtacccttggtgggagcagcagggcttcttcaggcctgagtatggg
cgttccagcgtgtcagcaccaaacccccggggcatcttcatgatgtgcatcccacccccc
aacgtgacaggctccctgcacctgggccatgcgctcaccaacgccatccaggactccctg
acccgctggcaccgcatgcgcggagagaccaccctgtggaaccctggctgtgaccacgcg
ggcattgccacccaggtggtggtggagaagaaactctggcgcgagcaggggctgagtcgg
caccagctggggcgagaggctttcctgcaggaggtctggaagtggaaggaggagaaaggt
gaccggatttaccaccagctgaagaagcttggcagctccttggactggaatcgagcctgt
ttcaccatggatcctaaactgtcagcagccgtgacggaggcctttgtacggctccacgag
gagggaatcatttaccgcagcacccgccttgtcaactggtcctgcaccctcaactctgcc
atctccgacatcgaggtggataagaaggagctgacaggtcgcacactgctctccgtgcct
ggctacaaagagaaggtggagtttggggtccttgtctcctttgcttacaaggtccaaggc
tcagacagcaacgacgaggtggtagtggcaaccactcggatcgagacgatgctgggagat
gtggccgtagctgtgcatcccaaagaccccagataccagcacctgaagggcaagagcgtg
atccacccatttgtgtctcggagcctccccatcgtctttgatgactttgtggacatggag
ttcggcacaggtgcggtgaagatcacccccgcccacgaccagaatgactatgaggttggg
cagcggcacgggctggaggctgtcagcattatggacgcccgcggggccctcgtcaacgtg
cccccacctttcctgggcctgcccaggtttgaggccagaaaggcggtgctggcagcgctc
aaggagcaggggctgttccgcggcattgaggacaaccccatggtggtgccactttgcaac
cgctccaaggacgtggtggagcctctgctgcggccgcagtggtacgtgcgctgtggggag
atggctcaggccgccagcgctgccgtgacacggggtgacctccgcatcctcccggaggcc
catcagcggacgtggcacgcctggatggacaacatccgggactggtgtatctcccggcag
ctgtggtggggtcatcgcatcccagcctacttcatcactgtcaatgaccccgccgtgccc
ccaggggaggaccctgacgggcggtactgggtgagcgggcgcactgaggccgaggcccgg
gagaaggcagccaaggagttctgcgtgtcccctgacaagatcagtctccagcaagatgaa
gatgtactggacacctggttctcctctggcctcttccccttctccatcctaggctggccc
aaccagtcagaagatctgagtgtgttctacccggggacgctgctggagacaggccatgac
atcctcttcttctgggtggccaggatggtcatgcttggcctcaagctcactggcaagctg
cccttcaaagaggtctacctccatgccatcgtgcgggacgcccacggccggaagatgagc
aagtctctaggcaatgtcattgaccccctggacgttatccatggggtcaccctgcagggt
ctccacgaccagttactgaatagcaacctggatcccagcgaggtggagaaggcaaaagag
gggcagaaggcagatttcccgacggggatccccgagtgtggcaccgatgcgctccggttt
ggactatgcgcctacacgtcccagggccgtgacatcaacctggatgtgaaccggatattg
gggtaccgccatttctgcaacaagctctggaacgccaccaagtttgccctccgtggcctt
gggaagggtttcgtgccctcacccacgtctgagcctggaggccgcgagagtctggtggac
cgctggatccgcagccggctgaccgaagctgtgaggctcagtaaccaaggtttccaggcc
tacgacttcccggctgtcaccaccgcccagtacagcttctggctctatgagctctgtgat
gtctacctggagtgccttaagcctgtgctgaatggggtggaccaggtagcagccgagtgc
gcccgccagaccctctacacctgcctggacgtgggcctgcggctactctcacctttcatg
cccttcgtgactgaggagctgttccagcggctgccccggcggacaccacaagctccccct
agcctctgcgtcactgcctacccagagccctcagagtgctcctggaaggaccctgaggca
gaagctgccttcgagctggccctgagcatcactcgagccgtgcgctccctgcgtgccgac
tacaaccttacccggatccggcctgactgtttcctggaagtggctgacgaggccacaggt
gccctggcatcagcggtgtcgggctacgtgcagacactggccagcgcggggattgtggcc
gtcctggcgctgggggcttctgcaccccagggctgcgctgtggccctggcctctgaccgc
tgctccgtccacctgcagctgcaggggctagtagacccagcccgggagctgggcaaactg
cagaccaagcgtgacgaggcgcagcggcaggcccagcgtctgcgggagcgccgtgccgcc
tcaggctacactgtcaaggtgcccctcaaagtccaggaggcagatgaagccaagctccag
cagacagaagcagagctcaggaaggttgatgaggccattgccctgtttcagaagatgctg
tga
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