Bos taurus (cow): 505814
Help
Entry
505814 CDS
T01008
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
505814 (HFM1)
Enzymes [BR:
bta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
505814 (HFM1)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Meiosis-specific proteins
Others
505814 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
ResIII
AAA_22
Hfq
Motif
Other DBs
NCBI-GeneID:
505814
NCBI-ProteinID:
NP_001192505
BGD-bta:
BT13242
Ensembl:
ENSBTAG00000020856
VGNC:
29832
UniProt:
F1MFR1
LinkDB
All DBs
Position
3:51980882..52089744
Genome browser
AA seq
1437 aa
AA seq
DB search
MLESNDSVFSLDNLFFEKTDEAENHLDSEISMDWFLPPAPLISEIPDTQALEEEIENHQL
LGQNKKSKMLPSNLKITNEDINYVLQTQKFQFDFPSNEYEEDDLNLGGAGNNDLHVAGKL
TCGSSQKWKNHIGTEIELEKNVPDDTKLVNSAQDKGVSMSAFRKRLFKISDNIHEDGYSN
DSANLDSNTGSVKIVQTEVNKGKSWKDSNSKQKPQYSDCNILTATDTLFASEIREGIIKA
PLFPVASQPHTVQGVTEKSLDSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRN
FVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFDDWKKKFGPIG
LNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVHLVRLFLIDEVHVVKD
ENRGPTLEVVVSRMKTVQILSPAVENTNSIIPMRFVAVSATIPNAEDIAEWLSDGERSAV
CLKMDERHRPVKLRKVVLGFPSSDNQTEFKFDLTLNYKIASIIQTYSDQKPTLVFCATRK
GVQQAASVLVKDAKFIMTVEQKQRLQKCAYSIKDSKLRDILIHGVAYHHAGMELSDRKVV
EGAFTVGDIPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGRP
QFDTTATAVIMTRLSTKEKYIQMLACSDTIESSLHRHLIEHLNAEIVLHTITNVNIALEW
IRSTLLYIRALKNPSHYGFASGLNKDGIESKLQELCLKNLNDLSSLNLIKMDEDINFKPT
EAGRLMAWYYITFETVKKFCTMSGKETLSDLVTMIASCKEFLDVQLRINEKKALNTLNKD
PNRTTIRFPMEGRIKTREMKVNCLIQAQLGCIPVQDFALTQDTAKIFRNGSRITRWLSDF
VATQEKFAVLLNSLILAKCFRCKLWENSPHVSKQLEKIGITLSNAMVNAGLTSFKKIEET
DARELELILNRHPPFGTQIKETVMYLPKYELEVEQITRYSDTMAEILVTVILRNFEQLQT
KRTASNSHYVTLIIGDADNQLVFKHKIMDSVLLKAGNWAKKFDVRRALKSENLSINLISS
EYVGLDIQRKFTVFYSGPKRFGNQIIIQKKSETEISHSEHSDRSTVAGPKKGMTACKKPG
NRECNHHCKNKHTCGHDCCKTGVAQKSEGKESTISSYLSDLRNRNAVSSLPPVKRLKMQM
NKSPSVDLKDFGFAPKPSLPSIARSEYLNTPELPIMEQRDQHEIYTKSQQQPSAYQDKEV
LKVNFELGNEIWDDFDDENLVEITSFSAETEKTKTSGFGNTLSSSTGESKLPFQESKGQF
QRESSKSFVSSHEKPDIYLSNSAVSKFGASSMTQLPQQSGNASIVHLQERKQQSLSPEIE
KLCFTRSEKISNSSNFNEKVDCFIRNECKKEIDFSRYHPDDEADEIKSFLGIFDGIF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgttggaatcaaatgactccgtgttttccttggataatttgttttttgaaaaaacagat
gaagctgaaaaccacctagacagtgaaatatctatggattggtttcttccacctgctcca
ctgatttcagaaattccagatactcaagcattagaggaagaaatagaaaatcatcaactg
ttaggtcagaataaaaaatcaaaaatgttaccatcaaatttaaagataactaatgaagac
ataaattatgttttacaaactcaaaaattccagtttgacttcccttctaatgaatatgaa
gaagatgatctaaatttaggaggggcaggtaacaatgacttacatgttgctggcaagctg
acatgtggttcttctcagaaatggaaaaatcacattggcactgagatagaacttgagaaa
aatgttccagatgatacaaagttagttaattctgcacaagataaaggagtgagcatgtca
gccttccgcaaaaggttatttaaaatatctgataatatacatgaagatggttattccaat
gacagtgcaaacttggactctaatactggctcagtgaaaattgtccaaacagaagtgaac
aaagggaaatcatggaaagatagcaatagtaagcagaaacctcaatattcagactgtaac
attttgacagccactgatacactttttgcttctgaaatcagagaaggcataatcaaagca
ccactttttccagttgcatcccagcctcatacagttcaaggggtaacagaaaaaagttta
gattccttgaaggctgtcacagaaattcctgctaaatttagaagtattttcaaagaattc
ccatatttcaattatatacagtccaaagcctttgatgatcttctttatacagataggaat
tttgtgatttgtgctccaactggttctgggaaaactgtagtgtttgaactagctataaca
agactgttaatggaagtaccattgccatggtcaaacattaaaattgtttacatggcacca
ataaaagccctgtgtagtcagcgttttgatgattggaaaaaaaaatttggaccaatagga
ttaaattgtaaagaactcactggagatacagtaatggatgacctatttgagattcagcat
gcccatattattatgacaactccagaaaaatgggatagcatgactagaaaatggagagac
aactctttggtccatctggttcgattgtttctcattgatgaggtacatgttgtaaaagat
gaaaatcgtggaccaactcttgaagttgtagtcagcagaatgaaaactgtgcagatttta
tctcctgctgtagaaaataccaacagtattattccaatgagatttgtggctgtatctgca
acgattccaaatgctgaggatattgcagaatggctttcagatggtgaaagatctgctgta
tgtctgaaaatggatgagagacatagaccagtgaaacttcggaaagtggttcttgggttt
cccagcagtgataaccaaactgaattcaagtttgatttaaccctcaactacaaaattgcc
agtattatacaaacgtactctgatcagaaacccacacttgtgttttgtgcaacaaggaaa
ggtgtgcaacaggctgcttcggttcttgtgaaagatgcaaaatttattatgactgtggaa
cagaaacagaggttacaaaagtgtgcatattccataaaagattcaaaactgagagatatc
ttaatacatggtgttgcttatcatcatgctggtatggaactgtcagatagaaaagtagtt
gaaggagcttttactgttggagatataccagttctttttactaccagtaccttagccatg
ggagtcaatttgcctgctcacctagtggttataaaatctacaatgcattatgctggagga
atgtttgaagaatacagtgaaacagatattctacagatgattggtagagctggtcgacct
caatttgacactacagccactgcagttattatgactcggttaagcacaaaagagaagtat
attcagatgcttgcttgcagtgacactatagaaagcagtttgcacagacatcttattgag
catttaaatgcagagatagtattgcataccatcacaaacgtgaatattgctttggaatgg
atacgatcaaccttgctttatatcagagccttgaaaaatccatctcattatggttttgca
tctggattgaacaaagatggaattgaatcaaaattacaagaattgtgtttgaagaatctg
aatgatttgtcatctctgaacctgataaaaatggatgaagatattaatttcaaaccaact
gaggcaggaagattgatggcttggtattatattacatttgagacagtgaagaaattttgt
acaatgagtggaaaagaaactttatcagatctggtcacaatgatagccagctgcaaggaa
tttctagatgtacaattaagaataaatgaaaagaaagcattgaatactttgaacaaagat
ccaaatcggacaactatcagatttccaatggaaggaaggattaaaacaagagaaatgaaa
gtaaattgtcttattcaggctcagctaggatgcattcccgtacaagactttgctttgacg
caagataccgcaaagattttcagaaatggctcacgaattacaagatggttatcagatttt
gtggctactcaagaaaagtttgcggtattattgaacagtttgattttagctaaatgtttt
agatgtaaactttgggaaaactctccacatgtatccaaacagctggaaaaaattggtata
acattatcaaatgctatggtaaatgcaggtttgacttcctttaaaaaaatagaagaaaca
gatgcaagggaacttgagctgattttaaatagacatcccccttttggaactcagataaaa
gaaacagtgatgtatctaccaaaatatgaacttgaagtggaacagattacaagatatagt
gataccatggcagaaatattagtgactgttatattaagaaactttgaacagctacaaact
aaaagaacagcatcaaattctcactatgtcaccttgatcataggtgatgcagataatcaa
ctggtttttaagcacaaaattatggattctgttttgctaaaagctggaaattgggctaaa
aagtttgatgtgaggagagctcttaaatctgaaaatcttagcataaatctaattagttca
gaatatgttggacttgatatacagcgcaaatttacagtcttttactcaggaccgaagaga
tttggaaatcaaataattatacaaaaaaaatcagaaacagagatttcccattctgaacat
tcagatagatctactgtagcaggccccaaaaaaggaatgactgcttgcaaaaaacctggg
aaccgagaatgtaatcatcactgtaaaaataaacatacatgtggacatgactgctgtaaa
actggagttgcacagaagtcagaagggaaagaatcaacaatttcttcatatttatctgat
ttaagaaatagaaatgctgtttcatctcttcctccagttaaacgtctgaagatgcagatg
aataaatctccaagtgtggaccttaaggactttggttttgctccaaaaccttctcttccc
agtatagcaaggtcagaatatttaaacacacctgaattgcctataatggagcagagggat
cagcatgagatctatacaaaaagtcaacaacaaccatctgcatatcaagacaaagaagtt
ttgaaagtgaactttgaattgggaaatgaaatttgggatgactttgatgatgaaaactta
gtagaaattactagcttttcagctgaaactgagaagacaaaaacatcaggatttggaaac
actttgagttcaagtactggggaaagtaagctaccattccaagaatcaaaaggccagttc
caaagagaatcatctaagagttttgtttcatcacatgagaagccagatatttatttatca
aattctgctgtgtccaagtttggtgcatcctccatgacacaattacctcaacaatctgga
aatgcaagtattgtccatttacaagaaagaaaacaacaaagtctgtcaccagagattgaa
aagctatgctttactcgctctgaaaaaatatcaaactcttcaaattttaatgagaaagtg
gattgctttattagaaatgaatgtaaaaaggagattgatttcagtaggtatcatcctgat
gatgaagctgacgaaataaagtcttttctgggaatatttgatggtatcttctaa
DBGET
integrated database retrieval system
