KEGG   Bos taurus (cow): 506199
Entry
506199            CDS       T01008                                 
Name
(RefSeq) uncharacterized protein KIAA1797 homolog
  KO
K27498  focadhesin
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    506199
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     506199
SSDB
Motif
Pfam: Focadhesin DUF3730 HEAT
Other DBs
NCBI-GeneID: 506199
NCBI-ProteinID: NP_001193444
BGD-bta: BT14430
Ensembl: ENSBTAG00000038181
VGNC: 29071
UniProt: A7YWF5
LinkDB
Position
8:complement(23422452..23725192)
AA seq 1805 aa
MLDDIRKRFEFPNSLIQSQAVGHLIAAVLKENSFSEKIHQCTNQTPALNLLWEKCCSDNV
VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKALMKLLQMQAVKEGHSG
EKNIQDIYNIRNHPQPLITVLEHRPDCWPVILQQLTAFFQQCLERSEVSCIQIMAPFLWY
LYCEPPQLQEYAKLRLTLLKVLLKPRVPCDKEQPSILEQQILQLCCDMVPCLQIKDLIQT
TEVMLFIEEVYLNLLRYPVFWKIQLTQLTLQLLCVCEVSLNITGECSSLIHLLEHSVELL
KEDFPVEPVIIGIALLLLQTPASQQKPILSLALKLLSSAESQKIPKSSLLLVMPLLQILS
STALEDCISVDEEGPSRQQLAVNLLEMVQEERYRDEHRKLSYKLAFPITSMYGSIFTAWR
ILEVMREESAASDWLASVESLLPITTVIPAHVFLLLAYLLVEDKGRNLHQILKVTTELAQ
ADSSQVPNLIPVLMFKLGRPLAPVLYNDILYTLPTLGVHKVCIGQILRVIQLLGTTPQLK
AVTLRLLTSLWEKQDRVYPELQRFMAMSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTAEYENFKVQVLSFLWNHTQNKDPIVANAAYKSLSHFGAG
DHTILHLPEEVRPEIQTPDDLDEDEDEEGDEKEVDLSIPGSCYLKLLSLTAPSVLPALEE
FFTSLVKQEMVNMPRGVYHSALKGGARLDQGKTVAGIPNFMLKMYETNKQPGLKPGLAGG
MLFCYDISMYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQPSEWHRAIFLPQAWLAY
MTRAYHAILQGRIGELDLQLKHGKEGPEEVQYKKNTAWLWVRDMLTDEITKAAAKDSPVV
KGNALLALSSLAVVVSKHEVSLCSDSDRVLEVQPHFLSVKDWVSMIFDTLLVIVDSHYQP
RGHFFSSFYHKSYSGENTASAIARSAAATALSLLVPIFIISCKEKVEEILNMLTARLPGK
PRADESQAVQIHMGLALGMFLSRLCEEKLSDISSQQMNLLLMKSLDALENCCFDPSLEYN
TGCILGVGLVLSLMSHSGQTESRVHVAASLRKLSAYLDDSRSQSRTFQEVLAYTLSCVCT
SAFSAGIIEAVEAEDIMNKLRLLVDNSQQTSGFALALGNIIHGLSVCGHGKAEDLGNRLL
PAWIKTVLTEGAPTMLCLAALHGMVALVGSEGDVMQLKSEAIQSSQSQGRLNEVIRTLTQ
VISVSGVIGLQSNAIWLLGHLHLSTLSSNQSRTSVPTDYSYLPENSFIRAAIGFFVTGGK
KGPESVPPSLLKVVMKPIATVGENHQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQA
QSSQNVTTLLGMWVMPPLIHGLSLNIKKYLLLSVPSWIKHVSDEQIVGFVESLMVAVFKA
ASPLSSPELRPSALQGLSQAMKLPSPSHHLWSLLSEATRKIFDLLPNKIRRNDLELYISV
AKCLSEMTDDEADRVAQITESSLEKAAFVRLYLVSQGRFPLMGLTDVLSVAVQHREKDTL
AWMTLHSLYQARIVSHANTGVLKRMEWLLELMGYIRNVAYQSTSVQNVALDEALDFLLLI
FAAAVVAWADHAAPLLLGLSASWLPWHQENGPAGPASSLLGRSPLHRVTLQEAVTLLPSS
MPLLLQKEPWKEQTQKFIDWLFSIMESPKEGLSAKSKDLLKATLLSLRVLPEFKKKAVWT
RAYGW
NT seq 5418 nt   +upstreamnt  +downstreamnt
atgttggatgacataaggaaaaggtttgaatttccaaattctcttatccagtcacaggct
gtgggtcatcttattgctgcagttctaaaggaaaacagcttttcagaaaagatccaccag
tgcacaaaccagactcctgccttgaacttgctgtgggagaagtgctgcagcgataatgtc
gtagttcgaacagcttgctgtgagggtctggtggcccttgtcgctcaggatcacgcggag
ttcagctatgttctcaatgggattctcaacctgattccatcaaccagaaatacacatggc
ttgataaaagcccttatgaaactattacaaatgcaagctgttaaggaaggacacagcggg
gagaagaatattcaggatatatataatattagaaaccatcctcagcctttgatcactgtt
cttgagcacagacctgattgctggccagtcattttgcagcagctgacagcttttttccaa
caatgccttgaaaggtctgaagtttcgtgtatccaaattatggcgccatttctatggtat
ctatattgtgaaccaccccagttacaagaatatgctaaactcagattaactctgctcaaa
gtcttacttaaaccccgggtcccttgtgacaaggaacaaccatcaatattggaacaacag
atactacaactgtgttgtgacatggttccatgtttgcagatcaaagatttgatacagaca
acagaagtgatgctgtttattgaagaagtatacttaaaccttttgcgttatcctgttttc
tggaaaattcagcttacccagctgacccttcagctgctatgtgtctgtgaagtcagctta
aacataactggggaatgctcatctttaattcaccttttagagcacagtgttgaacttcta
aaggaggattttcctgttgaaccggtcataattggaatagctttactacttctacagact
ccagcaagtcaacagaagccaatcttaagtctagctctgaagctcctttcttctgctgag
agtcagaagatcccaaagtcctcgttgctgctagtgatgccacttctgcagatactgtct
tctactgccttggaagactgtatatccgtggatgaagaaggcccctctaggcagcagttg
gctgtaaaccttttagaaatggtgcaggaggagcgctacagagacgagcaccgaaagctc
tcctacaagcttgcgttccccataaccagcatgtatggttcaatatttacagcctggagg
atccttgaagtaatgagagaagagtctgcggcaagtgactggttggcttccgtggagtca
ttgctccctataaccacagtgatccctgctcatgtttttcttctgctggcttacctcctt
gttgaagataagggacgaaatcttcaccagatactgaaggtcactacagaattagcccaa
gccgattcctctcaggtaccgaatctgattccagttttgatgttcaaattaggaagacca
ctggcacctgtgttatacaatgatatcttgtatactttacctacacttggagttcacaag
gtgtgcataggacagattctacgagtaattcaacttcttggaaccactccacaactaaaa
gctgtcactttgcgcttgttgacatctttgtgggaaaaacaggatcgtgtctatcctgaa
ctgcagcgtttcatggccatgtccgatgtgccctctctgtctgtgggcaaggaagtccaa
tgggagaaactaattgctaaagcagcatcaatcagagatatatgtaagcaaaggccatat
cagcatggtgcagatatgttggcagctatttcccaggtgttgaatgagtgcactaagcct
gaccaagctactccagcagccttggtgttacaaggtcttcatgcactctgccaagctgag
gtggtttgtattcgctccacttggaatgctctctccccaaagctgagttgtgacacaaga
cctctcattttgaagaccctcagtgaactgttttctctggttccttccttaacagtcaat
acagctgagtatgagaattttaaagttcaagtcctcagcttcctctggaaccatactcaa
aacaaggacccaattgtcgcaaacgctgcctataaatctctgtcacactttggtgccggg
gaccacacgattcttcatctgcctgaagaggtaagaccagaaatccaaactcctgatgac
ctagatgaagatgaagatgaggagggtgatgaaaaagaggtggatctttccattcccggc
tcttgctatctcaaacttttgtcactcacagctccttcagttttaccagctttggaggaa
ttttttacatcacttgtgaagcaagaaatggtgaatatgccccgtggggtgtatcactct
gcattgaaaggaggtgcccgcttagatcaagggaagactgtagcaggaatccccaatttt
atgttgaaaatgtacgaaacaaacaagcagccaggtttgaaacctggccttgcgggtggt
atgttattttgttatgatatttcaatgtatcagagtaaagatggcaaaccattgaatcga
ctgatggccagtagagggcgaagcttcaagcagacctcacttgctctagtgcatgaggtt
catatccagccttccgagtggcaccgggcaattttcctcccccaggcctggctcgcatat
atgactcgtgcttatcatgccattttacagggaaggataggagaactggatttgcagtta
aaacatggaaaagaaggacctgaagaggtgcagtacaaaaaaaacacagcctggctctgg
gttcgagacatgttgactgatgaaatcaccaaagcagctgcaaaagacagcccggtggtc
aaaggcaacgcgctgttagccttaagcagcctcgctgtcgtcgtttccaaacatgaagtc
agcctctgctcagactctgacagagtcctggaggttcagcctcacttcctgtcagtgaaa
gattgggtttccatgatatttgatacccttctggtcatcgttgatagccactaccaaccc
agaggacactttttctcctcattttatcataaatcctattccggtgaaaacacggccagt
gccattgcccgttccgcggccgccacggctttgtctctccttgtgccaattttcattatc
tcttgcaaagagaaggttgaggaaatcctgaacatgctgactgccaggttacctgggaaa
ccaagggctgacgagtctcaagccgtgcaaatccacatgggcctcgcactggggatgttt
ctctctcgcctgtgtgaggagaaactcagtgacatatctagccaacagatgaaccttctt
cttatgaagtctttggatgccctggaaaactgctgctttgaccctagtcttgaatacaac
acgggctgtatactgggagttggactcgtcctatccctcatgagtcacagcggccagaca
gagtcccgagttcatgtggcagcctcgcttcggaagctctccgcatacctggatgacagc
aggagccagagcagaaccttccaggaggtccttgcctataccctcagctgtgtatgtaca
tctgcattcagtgccggcatcattgaggcagtggaggctgaagatatcatgaacaagctt
cgactgttagtggacaacagccagcagacttcaggttttgccctggcattaggaaacata
attcacggcttgtctgtgtgtggacatggaaaagctgaagacttgggcaacagattgctt
ccggcctggatcaaaactgtcctaacagagggcgctcccacaatgctttgcttggcagct
cttcacggcatggtggcgttggtaggctccgaaggggatgtaatgcagctgaagtcagaa
gccatccagtcctctcagtctcaaggcagacttaatgaagtcattagaactttaactcag
gtcatcagtgtgtctggggtgattggtcttcagtcaaatgccatctggcttctaggacat
cttcatctgtctactctgtcctcaaatcaaagtagaacctcggtgcctactgactacagc
tatttgcctgaaaacagttttattagagcagccattggcttcttcgttacaggaggaaaa
aaaggccctgaatctgtgcccccttcccttctcaaagttgtgatgaaacccatagcaact
gttggagaaaaccaccagtatcctcctgtgaactgggctgctctcctctctccacttatg
aggctaaactttggtgaagagattcagcaactgtgtcttgaaatcatggtgacccaggca
caatcctcccagaatgtcactacactgttgggaatgtgggtgatgccacctctgatccat
ggtctgagtctgaatatcaagaaataccttctcttatctgtgccttcatggataaaacat
gtctctgatgaacagatcgtgggttttgtggaaagcttaatggtggcagtttttaaagca
gcttccccactctccagtcctgagttacgcccaagtgccttacagggcctgagtcaggcc
atgaaactgcccagcccttcccaccacctctggagtctgctcagcgaagctactaggaaa
atttttgacctcctgccaaataagattcggagaaatgatctagagctgtatatcagtgta
gcaaagtgcctctcggaaatgacagatgatgaagccgatcgggttgcccagattactgag
agtagcctagaaaaggctgcctttgtcaggctctacttggtctctcaaggacgattcccc
ttgatgggcttgactgatgtgctcagtgtcgctgtccagcaccgtgaaaaagacacactg
gcctggatgacgctgcacagcttataccaggcacggattgtgagccacgccaacactggc
gtgttgaagagaatggagtggctcttggaactgatgggttatatcagaaatgttgcttac
cagtcaacgtctgttcagaacgtggctcttgacgaggctttggacttcttgttgctgata
tttgcagccgcagtggttgcatgggcagatcacgctgcccctctcctccttggcctcagt
gccagttggttgccatggcaccaggaaaatggcccagctgggccagcatcaagcttgctt
ggcaggagtccattacacagggtcactctgcaggaggctgtcactctccttcccagtagc
atgcctcttctgctgcagaaagagccatggaaggaacagacccagaagttcattgactgg
ctgttcagcatcatggaaagccctaaggaaggactctcagcaaaatccaaggatctttta
aaagctaccctgctgtccttgagagttctcccagagtttaagaagaaagctgtatggacc
agagcctatggttggtga

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