Bos taurus (cow): 507133
Help
Entry
507133 CDS
T01008
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain isoform X1
KO
K16628
collagen type VII alpha
Organism
bta
Bos taurus (cow)
Pathway
bta04382
Cornified envelope formation
bta04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
507133 (COL7A1)
09158 Development and regeneration
04382 Cornified envelope formation
507133 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
Pur_ac_phosph_N
VWA_2
Kunitz_BPTI
Ig_DSCAM-DSCAML_C
DUF4992
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
507133
NCBI-ProteinID:
XP_002697097
VGNC:
27573
UniProt:
A0AAA9TK71
LinkDB
All DBs
Position
22:51287420..51317719
Genome browser
AA seq
2930 aa
AA seq
DB search
MRLRLLVAALCAGILAGAPRVWAQPRERVSCTRLYAADIVFLLDGSSSIGRSNFREVRGF
LEGLVLPFSGAAGAQGVRFAAVQYSDDPRTEFDLDALGSGGDVIRAIRELSYKGGNTRTG
AAILHVADRVFLPQLARPGVPKVCILITDGKSQDMVDTAAQRLKGQGVKLFAVGIKNADP
EELKRIASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTLPPDDSTSGPRDLLL
EPGSQSLRVQWTAASGPVTGYKVQYAPLTGLGQPLPSELREVSVPAGETSVQLQGLRPLT
EYQVTVVALYANSIGEAVSGTARTTALEGPEVTIQNTTAHSLLVAWQSVPGATGYRVTWR
VVRGGATQQQELGSGQGSVLLRDLQPGTDYEVTVSALLGRSVGPATSLTARTDTSVEQTL
RPIILGPTSILLSWNLVPEARGYRLEWRRESGLEVPQKVVLPSDVTRYQLDGLQPGTEYR
LTLYTLLEGREVATPATVVPTELPVGPVTALQATELPGQRVRVSWSPVPGATEYRITVRS
AQGVERSLVLPGSQTAFDLDDVRAGLSYTVRVSARVGGREGAASILTVRREPEPPLAIPG
LRVMASDATRVRVAWGPVPGASGFRISWRTDNGLESSQTVPSDSTATDIVGLRPGTSYQV
AVSALRGREEGPPAVIVARTDPLGPVRSVHVTRVSSSSVTITWNRVPGATGYRVSWRSGR
GPEKSQLVSGEATVAELDGLEPDTEYTVRVWARVAGVDGTPASAVVRTDPRPVGSVSKLQ
IHNASSDVLRVTWVGVPGATAYRLAWGRSEGGPTRQQILPGNTDSAEIRGLEGGVSYSVR
VTALIGDREGAPVSIVVTTPPEAPPALETLRVEQRGEHSLRLHWQPVPGARGFRLRWRPE
GGQEQSRVLGPEVSSYDLDGLEPATHYRIWLSVLGTAGEGPPSEVTAYTESPRVPSTQLR
VVDTSVDSVTLAWTPVSGVSSYILSWRPLRGPGQELPGASQTLPGTSSSQRVTGLELGIS
YLFSLTPVRDGVRGPEASITQSPACPRGLMDVVFLVHATRDNAHRSEAVKRALEHLVSAL
GPLGPQAVQVGLLSYSHRPSPLLSLNSSHDLGVILQKIRNIPYTDPSGNNLGTAVVTAHR
YLLAPDAPGRRRHVPGVMVLLVDEPLRGDIFNSIREAQAAGLRVMMLGLAGADPEQLRRL
VPGMDPSQTFFAVDDGLSLERAVSSLAAALCQTALTTQPQPEPCSVHCPKGQKGEPGQMG
LKGQAGPPGPPGLPGRIGAPGPQGPPGSASAKGERGFPGADGPPGSPGRPGTPGAPGPKG
SPGWAGPRGEPGERGPRGPKGEPGEPGQVIGGEGPGLPGQKGDPGPPGPPGSRGPLGDPG
PRGPPGFPGTAVKGEKGDRGEQGPPGPGDGTAALGEPGLPGLPGSPGPQGSVGPPGEKGE
KGDCEDGAPGLPGQPGIPGERGLRGLPGDAGPKGDRGLTGAAGEKGERGSPGPVGPQGLP
GVAGRPGPEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGAKGEKGDMGPPGPKGATGF
KGEQGSPGLALPGDPGPKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPGPVGPR
GRDGEVGEKGDDGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEEGRNGSPGPS
GPKGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGERGVSGL
RGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGASGPPGPNGAMGKAGDPGRDGL
PGLRGEQGPPGPAGPPGAPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGR
DGPKGERGAPGSPGLQGPPGLPGQVGPPGQGFPGVPGSSGPKGDRGETGPRGEQGLPGER
GLRGEPGSLVNAERLLENIGIKTSALREIVETWEESSGGFLPTPERRRGPKGDPGERGPP
GKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGPTGLAGEPGKPGIPGLPGPAGS
VGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVDEPGSGLSREQGPPGFK
GAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGPNGSPGLPGERGVAGPEGKPGLQGPR
GTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLPGPPG
PSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPVGPKGEPG
PMGTPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDP
GEDGQKGAPGPKGHKGDPGVGVQGPPGPVGPPGLKGDSGPPGSPGPPGIVGFPGQTGPRG
ELGQPGPSGERGLAGAPGREGAPGPLGPPGPPGSAGVPGVPGLKGDKGDTGAGLPGARGE
RGEPGVRGEDGRPGLEGPRGLAGPPGIRGERGEKGDAGASGLKGDKGDSAVILGPPGPRG
AKGDSGERGPRGIDGDKGPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLMGPKGEPGAAG
IPGEPGSPGKDGVPGVRGDKGDVGFMGPRGLKGERGIKGACGLDGEKGDKGEAGPPGRPG
LAGRRGELGEPGVPGQAGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGVGGFPG
PRGSDGSSGPPGPPGSIGPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGP
AGPRGEKGEAALTEDDIRGLVRQEMSQHCACQGQYIASGSRPLPSYAADTAGPQLHPVPV
LRVSHAEEDGQVPPEDDEYEYSEYSMEEYQDPAAPWDDVDPCSLPLDEGSCSAYTLRWYH
RAGAGGTKACHPFVYGGCGGNANRFGTREACEHRCLPQAAHSQGTGAARS
NT seq
8793 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcggctcctggtggctgcgctctgcgccgggatcctggcaggggctccccga
gtgtgggcccagcccagggagagagtgagctgcacgcgcctctacgccgctgacatcgtg
ttcctccttgacggctcctcgtccatcggccgaagcaacttccgcgaagtgcggggtttc
cttgaggggctggtgctgcccttctccggggcagctggggcacagggtgtgcgcttcgcg
gccgtgcagtacagcgacgacccacggacagaatttgacctggatgcacttggctcaggc
ggagatgtgatccgtgccatccgagagctcagctacaaggggggcaacacgcgcacaggg
gccgcgattctccacgtggctgaccgcgtcttcctgccccagctggcccgacctggtgtc
cccaaggtctgtatcctcatcacagacgggaagtcccaggacatggtggacacagctgcc
cagaggttgaaggggcagggagtcaagctgtttgctgtgggcatcaagaatgccgacccc
gaggagctgaagcgaattgcctcacagccgactagcgatttcttcttcttcgtcaatgac
ttcagcatcttgaggacgctcctgcctctggtttcccggagggtgtgcacaactgcgggt
ggtgtgcccgtgaccctgccccccgacgactcgacctctggtccacgagacctgctgctt
gagccaggcagtcagtccttgagagtccagtggacagcggccagtggccccgtgactggc
tacaaggtccagtacgcacccctgacagggctgggacagccattgccaagcgagctgcgg
gaggtgagcgtcccagctggtgagaccagcgtgcagctgcagggtctccggccactgact
gagtaccaagtgacggtggtcgccctctacgccaacagcatcggggaggccgtgagcggg
accgctaggaccactgctctggaggggccagaagtgaccatccagaacaccacagcccac
agcctcctggtggcctggcagagtgtgccaggtgccactggctaccgggtgacgtggcgg
gtcgtcaggggtggggccacacagcagcaggagctgggctctgggcaggggtcagtgttg
ctgagggacctgcagcctggcaccgactacgaggtgaccgtgagtgccctgcttggccgg
agcgtggggccagccacctccctgactgcccgcactgacacgtccgtcgagcagaccctg
cgtcctatcatcctgggccccacgtccatcctcctctcctggaacctggtgcctgaggcc
cgtggctaccggctggaatggcggcgtgagagcggcttagaggtgccacagaaggtggtg
ctgccctctgacgtgacccgctaccagttggatgggctgcagccaggcaccgagtaccgc
ctcactctctacacgctgctagagggccgtgaggtggccaccccagcgaccgtggtcccc
actgagctgcccgtgggccccgtcacagccctccaggccaccgagctgcctgggcagcgt
gtgcgagtgtcctggagcccagttcccggcgccaccgagtatcgcatcactgtgcgcagc
gcccagggggttgagcggagcctggtgcttcctgggagtcagacggcctttgacttggat
gacgtccgggctgggctcagctacacagtgcgggtgtcagcgcgagtaggcggccgggag
ggcgctgccagcatcctcactgtccgccgggagccagaacccccactggccatcccaggg
ctgcgggtcatggcatcggacgcaacgcgagtgagggtggcctggggaccagttcccgga
gccagcggatttcggattagctggaggacagacaatggtctggagtccagccagacagtt
ccttcagactctactgccaccgacattgtggggctgagacctgggacctcctaccaggtg
gccgtgtcggcgctgcgaggaagagaggagggccctcctgcggtcatcgtggctcgaacc
gatcccttgggcccagtgagatcggtccatgtgactcgagtcagcagctcatctgtcacc
atcacctggaaccgggttcctggtgccacagggtacagggtctcctggcgctcaggccga
ggcccagagaaatcccagttggtttctggggaggccacggtggccgagctggatggactg
gagccagatactgagtacaccgtgcgtgtgtgggcccgtgtggctggtgtggacgggacg
cctgcctctgcggttgtgagaactgaccctcggcccgtgggcagtgtgtcgaagctgcag
atccataatgcttccagtgacgttctgcgggtcacctgggtgggggtccctggagccaca
gcctacagactggcctggggccggagtgagggtggccccacaagacagcagattctccca
ggaaacacggactccgcagaaatacggggcctcgaaggcggagtcagttattcagtgaga
gtgaccgcactcataggggaccgcgagggcgcgcctgtctccattgtcgtcaccacccct
ccggaggctcctccagccctggagacacttcgcgtggagcagcgaggggagcactcactg
aggctgcactggcagccggtgcctggtgcacgcggcttccgtctgcgttggcgacctgag
ggtggccaggaacagtcccgagtcctggggccggaagtcagcagctatgacctggatggg
ctggagccagcgacccactaccgcatatggctgagcgtcttggggacggctggagaaggg
cccccctcggaagtgactgcatacactgagtcacctcgtgtcccaagcactcaactgcgt
gtggtggacacgtcagtcgactcagtgactctggcctggaccccagtgtctggggtatcc
agctacatcctatcctggcggcctctcagaggccctggccaagaactgcctggggcctca
cagacacttccggggacctcaagttcccagcgggtgacaggcctagagctgggcatctcc
tacctcttctccctaactcctgtccgggacggtgtacgcggtcctgaagcctctatcaca
cagagcccagcgtgtccccgcggcctgatggatgtggtgttcctggtgcacgccactcga
gacaatgctcatcgctcggaggctgtgaagcgagccctggagcacctggtgtctgcactc
gggcctctcgggccacaggccgtccaggtcggcctcctgtcctacagtcaccggccctcc
ccactgttgtcgctgaacagctcccatgaccttggcgtcatcctgcagaagatccgcaac
atcccctacacggacccaagtgggaacaacctgggcacagccgtggttacagcccacaga
tacctgctggcaccagatgcgcctggacgccgccggcatgtgccgggggtgatggttctc
ctggtggatgagcccttgagaggtgacatcttcaactctatccgtgaggcccaggctgct
gggctcagagtgatgatgctggggctggcgggagctgacccagagcagctgcgtcgcttg
gtgcctggcatggacccttcccagaccttcttcgctgtggatgatggtctgagcttggag
cgggccgtcagtagtctggcagcagccctgtgtcagacagccttgaccacgcagccacag
ccagagccttgctcagtgcattgtccaaagggccagaagggggaacccggacagatgggc
ctgaaaggacaagccgggcctcctggcccccccggcctcccgggcaggattggtgctcct
ggcccccagggacctcctggaagtgcttctgcgaagggcgagaggggcttccctggggca
gatgggcctccaggcagccctggccgccctgggactcctggagcccctggtccgaagggc
tccccagggtgggccggccctcgtggagaaccaggagagcgaggacctcgaggcccaaag
ggggagccgggagagcctggacaagtcattggaggcgagggcccagggcttcctgggcag
aaaggggaccctggacctccaggtccccctggatctcgtgggccgttgggggacccggga
ccccggggtcccccgggatttcctggaacagctgtgaagggtgagaaaggcgatcgtggg
gagcagggcccccctggaccaggtgacggcactgctgctctgggcgagcctgggctgccg
ggtcttcctggaagccccggaccccaaggctcagttggcccccctggagagaaaggagaa
aagggtgactgtgaagatggagccccgggcctcccaggacaacccggaattccgggtgag
cggggccttcggggacttcctggagatgctggccccaaaggcgaccgaggactaacaggg
gccgctggagagaagggtgaacgtggatcgcctggcccagtgggaccacaggggctgcca
ggagttgctggacgacctgggcccgagggtcctgaagggccaccaggaccgaccggccgc
cgaggagagaagggggagcctggtcggcctggagaccctgcagtgggacctgggggtgct
ggagctaaaggagagaagggagatatgggcccccccgggcccaaaggagctaccggattc
aaaggggaacagggctcacctggcttggctcttcctggagaccctggccccaagggagac
cctggaggccgaggtcccattggcctcactggcagagcaggacccccgggcgactcagga
ccccctggagagaagggagaccctgggcggcccggttccccaggacccgtcggcccccga
ggacgagacggtgaagttggagagaagggcgatgacggtcccccgggtgacccaggtttg
cctggaaaagctggcgagcgtggccttcggggagcgcctggagctcgggggcctgtgggt
gagaagggagaccagggagatcctggagaggaaggacgaaatgggagccctggaccgtct
ggacccaagggtgaccgtggggagccaggtcccccaggagcccctggacggctggtggac
gtgggacttggagccggagagaagggagagcctggggaccgaggacaggagggtccacga
ggacccaagggcgaccctggcccccctggagcttctggggagaggggcgtcagtggactt
cgggggcctccaggcccacagggggacccaggtgttcgaggcccagcaggagaaaagggc
gaccggggccctcctggcctggatggccgcagtgggctggatgggaaaccgggagcctct
ggtccccctgggccgaatggtgccatgggcaaggccggagacccagggagagacggactt
ccgggccttcgaggagaacagggcccccctggccctgctggtccccctggagcaccggga
aagccgggcgaggatggcaagcctggcctgaatgggaaaaacggagaacccggggaccct
ggagaagacgggaggaagggagagaagggagattcaggcgcccctgggagagaaggtcgt
gacggccccaagggtgagcgtggagctcctggtagccctggactccagggccccccgggc
ctcccagggcaggtcggccctcccgggcagggcttccctggcgtcccggggagttcaggc
cccaagggtgaccgtggggagactggacccagaggggagcagggcctcccaggagagcgt
ggcctgagaggagagcctgggagcctggtgaatgcagagcggttgctggaaaatattggc
atcaagacatctgccctgagggagatcgtggagacctgggaagaaagctctggtggcttc
ctgcccacgcctgaacggcgtcgcggccccaagggggacccaggcgagcggggcccccca
ggcaaggagggccccatcggcttttctggagaacgtggaccaaagggagatcgtggagac
cccggccctcaggggccacctggcctggccctgggggagaggggccttcctggacctacc
ggccttgccggggagcctgggaagcctggtatccctgggctccctggcccagctgggagt
gtgggggaggccggaagacccggagagaggggagaacggggagagaaaggagaacgtgga
gaacagggcagagacggccttcctggcctccctggaccccccggacccccaggccccaag
gtggccgtggacgagccaggttctgggctctctagagaacaaggaccccctggattcaag
ggtgctaagggggatccaggcagtgatggcgaccgaggccccaaaggagacaggggtgag
ccgggcatcaagggcgaccggggagagcctggacagaggggtccgaatggcagcccgggt
ctgccaggagagcgcggcgtggctgggcccgaggggaagccgggtctgcaaggtccacgg
gggacccctggcccggcgggcggccatggagaccctggaccacccggggccccgggtctt
gctggccctgcgggaccccagggaccttctggcctaaagggggagcccggagagacagga
ccaccaggacggggcctgcctggacctactggagccgtgggacttcccgggccccctggc
ccttcaggcctggtgggtcctcaaggggcaccgggtttgcctggacaagtgggggagacg
ggaaagccgggagcgccaggtcgtgatggtgccactgggaaagatggagacagaggagcc
cccggtgtgccggggtcaccaggtctgccaggccctgtcggacctaaaggagagccggga
cccatggggacccctggacaggctgtggtcgggccccctggagcaaagggagagaagggt
gcccctggagcccttgctggagacctggtgggagagccgggagccaagggtgaccgagga
ctgccagggccgcggggcgagaagggtgaagctggccgtgcgggggagcctggagaccct
ggcgaagatggtcagaagggggctccgggacccaaaggtcacaagggtgacccaggagtt
ggggtccaggggccccctgggccagttggccctccaggtctaaagggagactcagggccc
cccggatcccccggacctcctggtattgtggggttccccggtcagacaggccctcgagga
gagctggggcagccgggccccagtggagagcggggtctggcaggtgccccagggagagag
ggagccccaggtcccttggggccgcctggaccacctgggtcagcgggagtacctggggtc
cctggactcaaaggagacaagggtgacactggagcagggctgcctggggcccgaggcgag
cgtggggagcccggtgtccggggtgaagatggccgccccggcctggagggaccccgagga
cttgcgggtcccccaggcatccggggagaacgtggggagaagggtgacgctggtgcctca
ggactgaagggtgacaagggcgactcagctgtgattttggggcctccggggccacggggt
gccaagggggactcgggtgaacgagggcctcggggaatagatggtgacaaaggacctcgg
ggagacagcggggaacctggagagaagggcaccaagggagagcctggtgacaagggctca
gccgggctgctgggagcgcgcggactcatgggacccaagggcgagcctggtgccgcaggg
atccccggcgaaccgggatccccaggaaaagacggagtccctggtgtccgaggagacaaa
ggagatgttggcttcatgggtccccggggcctcaagggtgaacggggaattaagggagcc
tgtggcctcgacggagagaagggagataagggagaagccggccccccgggccgcccaggg
ctggcaggacgcagaggagagctgggggagccgggtgttccaggccaggcaggggcccct
gggaaggagggcctgatcggtcccaagggtgaccgaggtttcgatgggcagccaggaccc
aagggtgaccagggcgagaaaggggagcggggacccccaggagtggggggcttcccaggt
cccaggggcagtgatggctctagtggtcctcccgggccacctggcagcattggtcccaaa
ggccctgaaggacttcagggtcagaagggtgagcgaggtccccctggagagagcgtggtg
ggtgcccctggggcccctggaactcctggagagagaggggagcaggggcgaccaggcccc
gcggggccccgtggtgaaaagggagaagctgcgctgacggaggatgacattcggggcctt
gtgcgtcaggagatgagtcaacattgcgcctgtcagggccagtatatcgcatctggatca
cggcctctcccgagttacgcagcagacaccgctggcccgcagctccaccccgtgcccgtg
ctccgcgtgtcccacgcagaggaggacggccaggtgccccccgaggacgatgagtatgaa
tactctgagtattccatggaggaataccaggaccccgcggctccttgggatgacgttgac
ccctgctcgcttccactggacgagggttcctgcagtgcctacaccctgcgctggtatcat
cgggctggggcggggggcacgaaggcctgtcaccccttcgtctacggtggctgcggaggg
aatgccaaccgttttgggacccgggaggcctgtgagcaccgctgcctgccccaggcggcc
cacagtcaagggacaggtgctgcccggagctga
DBGET
integrated database retrieval system
