Bos taurus (cow): 508018
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Entry
508018 CDS
T01008
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 precursor
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
bta
Bos taurus (cow)
Pathway
bta04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
508018 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
bta04091
]
508018 (FREM1)
Lectins [BR:
bta04091
]
C-Type lectins
Lecticans
508018 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
508018
NCBI-ProteinID:
NP_001179924
BGD-bta:
BT14766
Ensembl:
ENSBTAG00000020141
VGNC:
29110
UniProt:
E1BN52
LinkDB
All DBs
Position
8:29274945..29455599
Genome browser
AA seq
2180 aa
AA seq
DB search
MSSPSWGGLGALLLLLLLPGWASPTFVRVNQGVRVMKGSSAFLSQDDLKFTIPKEKDACK
VEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVKLRLYRFTETDTFTE
TFILRVYLLEPDCNIIRMSDNALEVSEFYGLSRVIDKNLLRFDYERMASLECTVRLDPVG
THLPAHGQLVLVEPQLEEPRGDQPHSFFPESQLGTELKCPGGRCTLGLKKVGSLKVSCEE
FLLMGLRYQHLGSPSPNIDYFSIQLDLTDSRSKISYKSESAWLPVYIRPGIPNQIPRAAF
MAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLWDHTRPVSSFT
WKDLRDMQIAYQPPNSSHSERRLYEVELEVYDFFFEKSAPITVHISIRTTDTNAPRVSWN
TGLNLLEGQSRAITWEQFQIVDNDDIHAVQVVTVDGLQHGRLTVRGGKGFLFTVADLQAG
VVRYHHDDSDSTKDFVVFRIFDSQHSIQHKFPINILPKDDSPPFLITNVVIELEEGQTIL
IQGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPAPGLIGYPVPGFIQRDLFNGIIYYR
HFGGEIFEDSFEFVLWDSHEPPNLSVPQVVTIHVTPVNDQLPKEAPGVSRHLVVKETEVA
YITKKHLHFIDTESQDRELLYTITTPPFFSSSRRHLDAGKLFMVDSIPRLTKTPAAPGLK
YFTQHAVNHMKVAYMPPMQDVGPHPRHVQFAFSVSNQHGGTLYGICFNITILPVDNQAPK
VFTKPLRVAEGGQCVISTQHVLVSDEDTKLDNIYLSLQSPPQHGMVELNGFPLNKGTTFP
WGVLQALKLRYQHDGSEELQDDIVLQVTDGTNTAEYVLHVEVFPVNDEPPVLKADLIPMM
HCSEGEEVVITSEYIFATDVDSDDLKLIFMIVGEPQHGTVRRAGVTVHQFSQEDVVAGAV
TYKHTGGEIGLMPCFDTITLVVSDREAGPFVNGCCYNGPHPSVPLHESFPMYDLNITVYP
VDNQPPSVAIGTTFVVDEGFSAALTVNHLSATDPDTAADDLEFVLVSPPQFGYLENTLPS
AGFEKSNMGISIASFQWKDMKALHINYVQSRHLGMEPTADKFVLYVTDGKRRSMEIPFYI
IINATNDEAPDFIVQNITVCEGQMRELDSSIISATDRDIPKNPLLFSITHKPRHGLLINR
AFSRNFFQYKQLANPGQKHELVYNFSMELLKNGMRLVYVHDDSESLADDFTIQVSDGKHK
ILKTIFVEVTPVNDEKPMLSKKAEITINMGETRIISSAVLSAIDEDSPREKIYYIFERIP
QNGQLQLKIGRDWVPLYPGMKCTQEEVDLNLLRYTHTGAMDSKNQDSFTFRLWDGDNRSP
AFDCHITIKNMGKGDIVILAKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPQF
GQVEYVRYPGVPITSFSQMDIAGQTVCYVDKSTTAVHRDTFRFIVSNGLQTKPGVFEITL
ETVDTALPVVTRNKGLRLVEGATGLLSPDLLQLTDPDTPAEKLTFLLAQLPRHGQLYLRG
MALIPHNFTQLDVDSGHVAYRHLGGDSWTDHFTFVATDGTNHGFLVDGRVWQEPVSFTIQ
VDQLDKAAPRVTHLHSPSQVGLLKNGCYGIYITSRVLKASDPDTDDNQIIFKILRGPQHG
HLENSTTGEFIHEKFSQKDLNSKTVLYIINPSLEVNSDTMEFQVMDPTGNSATPQSLELN
WSYIEWSRTEYEVCENMGMLPLEITRRGYSMDSAFVTVQVNQVSATVGKDFTMTPSKLVQ
FDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKTAVKILDSKGGQCHPSN
AFNSNMPSAWEKGIWHLLSPGASSPTTSDSFHLERRPLPTSKQLAVTRGDALRDFGSEDL
SPVKLRTRGDGKTVPPSSVYKNRTDIIYNYHGVISLKLEDDGSPARRRKANVSFISEPQK
TTKVAEPPQADKEESTTGSHFPRQDPLPSFPKNCTPELKGLFHFEESLQKLYKCDGIAWR
SWSPHTKEVEDKSCPAGWHHHSGYCHSLITEQKGTWTTAAQACREHYQGSLVTVISRQHM
RWLWDISGRKPFWIGLNDQVRAGHWEWIGGEPVTFTNWRRGPPQRSRHGKDCVLVQRPGK
WHTKDCRKGKSHSYVCSRKL
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccaagctggggtgggcttggtgccctgctcctgctgctgctgctcccaggc
tgggccagccccacctttgtccgtgttaaccaaggggtcagggtgatgaagggcagttcc
gccttcctgtctcaagatgacctgaagttcaccatccccaaagagaaagatgcctgcaaa
gtggaagtcgtgatgaatgagccaataacccagagggttgggaaactcactccacaggtc
tttgactgccatttccttcccaatgaagtaaaatatactcataacggttgcccaattctt
gatgaagacacagtgaaacttagactttacaggtttactgagacagacaccttcacggaa
acctttatcctgcgggtctacctcctggaaccagactgtaacatcatccgcatgagtgat
aatgcactggaggtgtctgagttctatggcctgtcccgagtcattgataagaacctgctt
agatttgattatgagaggatggccagcctggaatgcacagtcagactggaccctgtggga
actcacctgccagcccacggccagttggttctggtggagccccagctggaagaacctcgc
ggagatcagccacatagtttcttccctgagtctcaattgggaacagagctgaagtgtcca
ggcggcaggtgtaccctgggactgaagaaagtcggaagtctcaaagtgagctgtgaggag
ttcctgctgatggggcttcgataccagcacctgggttccccttctcccaacattgattac
ttctccatccaactggacctcacagatagcaggagtaaaatctcatacaagtcagagagt
gcgtggttgcctgtctatatcagacctggaattcccaatcagattccaagagctgcattt
atggccatgtttattctggaagtggatcagttcatcctgacctcattgaccacatcggtt
ctggactgtgaagaggatgagacccccaaacccttgctggtgttcaacattactaaagcc
ccactccagggctatgtgactcacctgtgggatcacaccagaccagtgtcctccttcacc
tggaaggatctaagggatatgcagattgcctatcagccaccaaacagcagccattctgag
aggagactttatgaggtggagttggaggtctatgacttcttctttgagaagagtgcacct
attacagtccacatttccatcagaacaacagatacaaatgccccgcgagtgtcctggaac
acaggtctgaatctcctggagggacagtctagggccatcacatgggaacagtttcagatt
gtggacaatgatgacattcatgctgtccaggtagtcactgtggatggcctgcagcatgga
cggcttactgtgagaggggggaaggggtttctcttcaccgtggctgaccttcaggctgga
gtcgttcgatatcatcatgatgacagtgactccaccaaagactttgtggtcttcaggata
tttgacagccagcacagcatccaacataagtttcccatcaacatcttgcccaaagatgac
agtccgccatttctcataacaaatgttgtgattgaactggaggaggggcagaccatacta
atccagggttccatgctgagagcttcagacatggactccagtgatgactacatcttcttt
aatatcacgaaacccccacaagctggagagatcatgaagaaaccagcaccaggactgata
ggctatccagtccctggcttcattcagagggatctattcaatggtattatttactatcgt
cactttggtggagaaatctttgaagattcatttgaatttgtcctgtgggacagccacgaa
cctccaaatctctcagtgccacaggtggtgacaatccatgtcactccagtaaatgaccag
cttccaaaagaggctcctggagtttctcggcatttagttgtcaaggaaacggaggtggcc
tacatcactaagaaacatctacattttatagatacagaatcacaagacagggagctgctc
tatacaataaccactcctccatttttctcctccagccgcagacacttagatgctgggaaa
ttgttcatggtggacagcataccaaggctaaccaagactcctgcagctccagggttaaag
tatttcacgcagcacgctgtgaaccatatgaaagtggcctacatgccacccatgcaagat
gtaggtccgcatccaagacacgtccagtttgccttttccgtcagtaaccagcacggtggg
acgctgtatgggatctgctttaacatcacgattcttccggtggacaatcaggccccaaag
gtgtttaccaaacctctgagagtggctgagggaggtcaatgtgtcatcagcacacagcat
gtcctggtttctgatgaggacaccaaactggacaacatctacctctccttgcagagtcca
cctcagcatggaatggtggagctaaatggattccctctaaacaaagggaccacgtttcct
tggggagtcctccaggccttaaaacttagatatcagcatgatggatccgaggaacttcag
gatgacatagtactgcaggtcacagatggcacaaacacagctgaatatgtcctacacgtt
gaggtgttccctgtaaatgacgagccaccagtgctaaaggcggacctcattcccatgatg
cattgctccgagggggaagaggttgtcatcacttctgaatacatttttgctactgatgtg
gacagtgatgatttaaagctgatattcatgattgttggagaacctcagcatgggaccgta
aggagagctggggtcacagtacatcagttctctcaggaagatgttgtcgcaggggctgtg
acgtacaagcacacaggtggtgagattggcctgatgccttgtttcgacaccattacattg
gtggtttcggacagagaagctggtccttttgtgaatggctgctgttacaatggacctcat
ccatctgttcctcttcatgagtcttttccaatgtatgatctcaacatcacagtgtatcca
gtggataaccaaccaccttcagttgccataggtaccacattcgttgtagatgagggcttc
tcagcagcccttactgttaaccatctgtctgccactgatcctgacactgcagcagatgac
ttggaatttgttttggtttctcctccccagtttggctaccttgaaaacacactcccttct
gcaggttttgaaaagagcaatatgggcatcagcatagcttcgtttcagtggaaagacatg
aaggctttacatattaactatgtgcagtccaggcatctggggatggaaccaacggctgac
aagtttgtgttgtatgtcactgatgggaagcgacgctccatggagataccattttacatt
ataatcaacgctacaaatgatgaagctcctgattttatagtgcagaatattactgtgtgt
gagggtcagatgagagagctggattcttccatcatcagtgctactgaccgggacattccc
aagaaccccttgctgttcagtatcacccacaaaccgcgtcatggcctcctcatcaacagg
gcatttagcagaaacttttttcaatataagcaactagccaaccctggccagaagcatgaa
cttgtctacaacttttccatggaacttctcaagaatggaatgaggttggtgtatgtgcat
gatgattcagagagtcttgctgatgactttacaatccaggtgtcagatgggaaacataag
atacttaaaaccatttttgtagaggtcaccccagttaatgatgagaaaccaatgctgagc
aagaaggctgaaattacaataaatatgggcgaaactcgtattatttctagtgctgttctc
tcagccatagatgaagactcacccagggagaagatttactatatatttgaaagaattccc
caaaatgggcaacttcaacttaagatagggagggactgggtccctctgtaccctggcatg
aaatgcactcaggaagaagtggatttgaacttgctgagatatacacacaccggggccatg
gactccaagaaccaagacagcttcaccttccgcctctgggacggtgacaacaggtcaccg
gcatttgactgtcacatcaccatcaagaacatggggaaaggtgatattgtcatcctggca
aaaccacttgtggtgtctaaaggtgacagaggtttcctgacgaccaccactctccttgct
gtggatggaacagacaagcccgaggaacttctctacgtcatcacctccccgccgcaattt
ggccaggttgagtacgtccgctatcctggggtccccattacaagcttcagccaaatggat
atagcaggacagacagtctgctatgtagataagagcacgacagctgtccacagagacacg
ttcagattcatcgtcagcaatggacttcagaccaagcctggggtttttgagatcacactg
gagactgtggacacagccttacccgtggtgaccaggaacaaggggttgagactggttgaa
ggggccacgggcctgctctcccctgacctcctgcagttgactgaccctgacactccagcc
gagaagctcacctttcttctggcccagctcccacggcatggccagctctacctgcggggg
atggcgctgatcccacacaatttcactcagctggacgtggacagtgggcatgtggcctat
cggcacttgggaggggattcttggactgaccacttcacttttgtggccacggatgggacg
aaccatggctttcttgtggatgggagagtgtggcaagaacctgtatcattcaccatccag
gtggaccagttggacaaagcggccccccgtgtcacacacttgcattccccttctcaagta
gggctcttgaaaaatggttgttatgggatttacatcacctcccgtgtgttgaaggcatca
gaccccgacactgatgataatcagatcatctttaagattttacgaggcccccaacatggg
catctggagaactcaacgacaggtgaatttatccatgagaaatttagccagaaggattta
aacagtaagaccgttctttacatcataaacccatctttggaagtaaattcagataccatg
gaatttcaagtcatggatcccacagggaactctgccactcctcaaagtttggaactgaat
tggtcttatattgagtggtcgcggactgaatatgaggtctgtgagaatatgggcatgcta
cccttggagattaccagaaggggatattccatggattcagcctttgtgactgtacaggtc
aaccaagtgtcagctacagttggaaaggatttcaccatgactccatctaagctggtgcag
tttgacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggattagag
gaagatgatgaggtctttgaagtaattctgaactcccccgtgaatgcggttcttggcaca
aagacaaaaactgcagtgaaaattttggactcaaaaggagggcagtgccatccttcaaat
gccttcaattcaaacatgcccagtgcatgggagaagggcatttggcacctgctctcccca
ggggcttcctcacccaccacttctgattcctttcatctggaaagaagaccccttccaact
tccaagcagctagcggtcaccaggggtgacgccctgcgggactttggttctgaagatctt
tctccagtgaagcttaggacccgaggggatggcaaaacagttcctccatcctctgtttat
aaaaatagaacagacatcatctataactatcatggggtgatttccctgaaactggaagat
gacggctccccagctcgcagaaggaaggccaatgtatcctttattagtgagccccaaaag
acaaccaaagtggcagaaccgcctcaagccgataaggaggaatccacaaccggctcacac
ttccccagacaggacccgttgccctcattcccaaagaactgcacaccggaattaaaggga
ctcttccactttgaagaaagcctccaaaaactgtacaagtgcgatggaattgcctggaga
tcctggagcccccacaccaaggaggtggaagataaatcctgcccagctgggtggcaccat
cattcaggctactgccactccttgatcacagagcagaaaggcacgtggactacagctgcc
caagcttgcagggaacattaccaaggcagccttgtaactgtcatctccaggcagcacatg
agatggctttgggacatcagtggaagaaagccgttttggataggtttgaatgaccaagtg
cgtgctggccactgggagtggattggcggtgaacctgtgaccttcaccaactggaggaga
gggcccccgcaacgttcaaggcatggcaaggactgtgttttggttcaaaggccaggaaaa
tggcacacaaaggactgtaggaagggaaaatctcacagttatgtgtgctccaggaaactc
taa
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