Bos taurus (cow): 508720
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Entry
508720 CDS
T01008
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
bta
Bos taurus (cow)
Pathway
bta04612
Antigen processing and presentation
bta05145
Toxoplasmosis
bta05152
Tuberculosis
bta05164
Influenza A
bta05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
508720 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
508720 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
508720 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
508720 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
508720 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bta01001
]
508720 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bta04054
]
508720 (CIITA)
Enzymes [BR:
bta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
508720 (CIITA)
Protein kinases [BR:
bta01001
]
Serine/threonine kinases: Other
TAF1 family
508720 (CIITA)
Pattern recognition receptors [BR:
bta04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
508720 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
CARD
AAA_22
Motif
Other DBs
NCBI-GeneID:
508720
NCBI-ProteinID:
XP_010817557
Ensembl:
ENSBTAG00000020649
VGNC:
27366
UniProt:
F1MG35
LinkDB
All DBs
Position
25:9542385..9601549
Genome browser
AA seq
1206 aa
AA seq
DB search
MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLT
LLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSAD
PLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQ
YVFQDTQLEGLSKDIFIEHIGLEEMISESVELLEEAGQKSQKRPFPEELPVDLKHRKLAE
PLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPA
GPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRP
GSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQS
LRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAA
SDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYR
LQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRS
LRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFES
EGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGL
LGPAARDSPPGALAELARLAWELGRVHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPET
ELAFSSFLLQCFLGAVWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQ
PRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQH
VLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTR
FRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSS
EAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGV
AQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESL
AHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLD
PRIILR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccagaccatcctgtctcaggtccggatgttgctctctagccatcggccg
agccaagtgcaggcgcttctggacaacctgctggcggaagagctcctctccagggagtac
caccatgccctgctccatgagtctgatggtgaggctctggccaggaagatctccttgacc
ctgctggagaaaggagacccagacttcgccctcttggggtggatctggagtgggctgcag
gcccccacagcagagaggggccccagctacaaggaccctggtggcagtggacagtgccca
accatggagctggggcctctagaaggcagttacttagaacttctcaacagcagtgctgac
cctttgcagctctaccacctctacgaccggatggatctgacaggagaagaagaaatagag
ctctgctcagagcctgacacagacaccatcaactgcgaacagttcagcaggctgttgtgt
gacatggaaggtgatgaagagaccagggaagcttatgccaatatcgcggaattggaccag
tacgtcttccaggacacccagctggagggcctgagcaaagacattttcatcgagcacata
ggattggaagaaatgatcagcgagagcgtggaattgctggaggaggcagggcagaaaagt
cagaagagacccttcccagaggagctgcctgtggatctgaagcaccggaagctagccgag
cccctcaccatgcccgtggtgactggcactttcctggtggggccagtgagcgactccttg
gttcagccttgcccgccacctcctgctctgttcaacacggagccagcatccagccagacc
cggctgaaggacgcagcgcctccgtccagttccttgttgagctgcctgagtcttcccgcg
ggacccattcagattatccccactctccccactctgccccaggggctgtggccgatctca
gggactgggacgggggtctccagtatactcatctaccaaagtgagatgcccccggccagc
caaacacccccatccagcgggcctgctgtccagagccttcccaagtccccagaccggcct
ggctctgccagcccctttgccccgtctgccgctgacctccccagcatgcccgaaccggcc
ctcacctcccgtgcaggcctgacagaggatgagatgtcccccaccaaatgcccagcagct
ggcggggcctccagcaaacttcccaagtggcctgagagcgtggagcagttctaccagtcg
ctacgggacaagtaccaggcccagcccaccggcccggaaggcaccctggtggacatggac
ctggtgagggtgaggctggagaagagcagcgggaagagccaggagagagagctggccacc
ctggactgggcagagcggcagccggcccgagggggtctggccgaggtgctgctggccgcc
agcgaccgccagcagccccgggagacgcgggtgatcgctgtgctgggcaaagcgggacat
gggaagagtcactgggcccgggccgtgagccgggcctgggcccacggccagctgccacag
tacgactttgtcttctgtgtcccctgccatcgtttggaccgtccggggacctcctaccgc
ctgcaggatctgctgtcctccctgggcccgcagccgttgccagtggacgacgaggtcctc
agttacattgcgaggagacccaaccgcatcctgctcatcctggatggcttcgaggacctg
gaagcccacgatggctccctgcacagcacaggaggccccgggtcggcagagccccgctcc
ctccgggggctgctggcgggcctcctccagcgcaagctgctgcggggctgcaccctgctg
ctcacggcctggccccggggccgcctggcccagagcctgagcaaggtggacgccctgttt
gaggtggccggcttctcggcccagcaggttgagacctatgtgaggcgttactttgagtcg
gaggggaccgctgagcaccaagagagagccctggcgctcctgcaggcccggccgttcctc
ctgagccacagccacagccccaccgtgtgccggaccgtgtgccagctcgcagaggccctc
ctgcagcggagtgatgaagcccagctgccctccacgctcacgggcctctacgtgggcctg
ctaggcccagcagctcgagatagccccccaggggccctggcggaactggccaggctggcc
tgggagctgggccgtgtgcaccagaggggcctgaaggcgggctgtttaccgtcggcggag
gcgagggcctgggctgtggcccaaggctggttgcggcccaccccgggggccccagagacg
gagctggccttctccagcttcctcctgcagtgcttcctgggggctgtgtggctggctctg
agcggcgaaatcaaggacaaggagctgccgcagtatctggccttgaccccgaggaagaag
cggccctatgacaactggctggagggcgtgccgcgcttcttggtcggactggtcttccag
cctcgcgccggctgcctgggggccctggcagggccggcggccaccacgtcagcggacagg
aagcagaaggtgctcacgaggtacctgaagcgtctgcagcccgggacgctgcaggcgggg
cggctgctggagctgctgcactgtgcccacgaggcgctggaccccgggctctggcagcac
gtgctgcaggggctccctgcccgcctctccttcctgggcacacggctcacgcctcctgac
acccatgtgctgggcagcgccctggaggccgcgggccgagacttttccctggacctccgc
agcactggcgtcgacgcctctggactggggagcctcgtgggactcagctgtgtcacccgt
ttcagggctgcattgagtgacactgtggagctatgggagtccctgcagcagcgtggggag
gccaagctactccgggcagtggaggagaagttcaccatcgagcctttcaaggccaagtcc
atgaaggatgtggaagaccttggcaatctcgtgcagatccagaggacaagaagctcctct
gaagcagcagctggggagctccctgctgtccgagacttaaagaagctggagtttgcgctg
ggccctgtcttgggcccacaggtttttcctaaactggtgaagatccttgaggcctttact
tcccttcagcatctagacctggactcgctgagcgagaacaagattggggacgagggtgtc
gcccagctctcagccaccttccctcagctgaaggccctggagacactcaacttgtcccag
aacaacatcaccgacgtgggtgcctgcaagctggccgaggctctgcccgcgctggccacg
tccctcctcaggttgagcttgtacaataactgtatctgcgacgcgggagccgagagcctg
gcgcacgcgcttccagacatggtgtccctccgggtgctggacgtccagtacaacaagttc
acagccgctggggctcagcagcttgccgctggcctgagaaagtgccctcaggtgaagaca
ctggcgatgtggacgcccaccatcccctttggcgtccaggaacacctgcagcagctggac
ccacgaatcattctgagatga
DBGET
integrated database retrieval system
