KEGG   Bos taurus (cow): 508813
Entry
508813            CDS       T01008                                 
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:bta04812]
    508813 (KATNB1)
Cytoskeleton proteins [BR:bta04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     508813 (KATNB1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Aladin NBCH_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_WDR19_1st RMC1_N WDR54 eIF2A Beta-prop_IP5PC_F PROPPIN Beta-prop_LRRK2 Beta-prop_NWD2_C Tricorn_2nd VPS8_N Beta-prop_WDR35_TULP_N Beta-prop_pof12 Beta-prop_ACSF4 Ge1_WD40 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 508813
NCBI-ProteinID: NP_001095379
BGD-bta: BT12414
Ensembl: ENSBTAG00000001848
VGNC: 30408
UniProt: A6QQU1
LinkDB
Position
18:25703245..25721212
AA seq 663 aa
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVHWGKVADLAICNNQLIGVAFSQSNVSSYVV
DLTRVTRTGTVARDPVQDSRPPTQQPPHPSAPLRRIYERPSTACSKPQRVKQNSESERRS
PSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDMATAKEAAKP
SPATDAQFPVPNICPGGAGTLEVLSRPPVVTSTPAPKAEPAIFPATRNEPIGLKASDFLP
AVKIPQQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRGVWTTGDIKTSVDSAVAIN
DLSVVVDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPL
ITDILAAPPSVGVDISREERLHKCRLCYKQLKSISNLVKSKSGLSGRHGSAFRELHLLMA
SLD
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggccacccctgtggtcaccaagacagcctggaagttgcaggagatcgtggcccacgcc
agcaatgtgtcctcgctggtgctgggcaaagcctcgggccggctgctggccacgggcggg
gatgactgccgcgtcaacctgtggtccatcaacaagcccaactgcatcatgagcctgacg
ggtcacacgtcccccgtggagagcgtccgcctcaacacccccgaggagctcattgtggcc
ggctcccagtcgggctccatccgtgtctgggacctggaagctgccaaaatccttcgtaca
cttatgggacacaaagccaacatctgcagcctggatttccacccatatggcgagtttgta
gcctcgggttcccaggacacaaacatcaagctctgggacatcaggaggaaaggctgtgtc
ttccgatacagggggcacagccaggctgtgcggtgtctccggttcagccccgacgggaag
tggttggcatcagccgcagatgaccacacggtgaagctctgggatctgactgctggcaag
atgatgtccgagttccctggccacacggggcctgtcaacgtggtggagttccaccccaac
gagtacctcctggcttctggcagctctgacagaaccatccgtttctgggacctggagaaa
ttccaggtggtgagctgtatcgaaggggagcccgggcctgtcaggagcatcctcttcaac
cccgatggctgctgcctgtacagtggctgccaggactcgctgcgcgtctatggctgggag
cccgagcgctgctttgatgtggtcctcgtccattggggcaaggtggccgacctggccatc
tgcaacaaccagctgataggcgtggccttctcccagagcaacgtctcctcttacgtcgtg
gacctgacgcgggtcactaggacaggcacggtggcccgggaccccgtgcaagacagccgg
cctccgacgcagcagccgccccaccccagtgccccgcttcgccgcatctacgagcggccc
agcaccgcctgcagcaagcctcagagggtgaaacagaactcggagagtgagcgccgcagc
cccagcagcgaggacgaccgggacgagcgggagtctcgggcggagatccagaacgcagag
gactacaatgagatcttccagcccaagaacagcatcagtcggacgccaccccgaagaagt
gagcccttccctgcacccccagaagatgacatggccacagccaaggaggcagcaaagccc
agcccagccacagacgcacagttcccagtgccaaacatatgtccaggcggagcgggcacg
cttgaggtcctatcccggcccccagttgtcacttccacccctgcacccaaggccgagcct
gccatctttcctgccacccgcaatgagcccatcggactgaaggcctccgacttcctgcct
gccgtgaagatcccccagcaggcagagctggtcgacgaggatgccatgtcccagatccgc
aaaggccatgacaccatgtgcgtcgtgctcaccagccgccacaagaacctggacactgtg
cggggtgtgtggaccacaggcgatatcaagacatcggtggactcagccgtggccatcaat
gacctgtctgtggtcgtagacctccttaacattgtcaaccagaaggcctccctgtggaaa
ctggatctgtgcaccacggttctgccgcagatcgagaaacttctgcagagcaagtatgag
agctacgtccagacgggctgcacctccctgaagctgatcctgcagcggtttctgcccctc
atcacagacatcctggcggccccgccctctgtgggtgtggacatcagccgggaggagagg
ctgcacaagtgccggctctgctacaagcagctcaagagcatcagcaacctcgtcaagagc
aagtcgggtttgagcggccgccacggcagtgcctttcgcgagctgcacctgctcatggcc
agcttggactga

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