Bos taurus (cow): 509083
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Entry
509083 CDS
T01008
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bta04121
]
509083 (PDZRN3)
Enzymes [BR:
bta01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
509083 (PDZRN3)
Ubiquitin system [BR:
bta04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
509083 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
CEP104_ZnF
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
509083
NCBI-ProteinID:
XP_002697002
BGD-bta:
BT15499
VGNC:
32731
UniProt:
A0AAA9TFP3
LinkDB
All DBs
Position
22:28118240..28387533
Genome browser
AA seq
1061 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGQVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTQGEQRAGGHCCARALRAHNAALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAPPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQMVDMGTQT
DITFEHIMALSKMSSPTPPVLDPYLLPEEHPSAHEYYDPNDYIAGIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWLDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDAPAASPPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCADADYLGIPVDECERFRELLELKCQVKSAG
PYGLYYPGSTLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQFREPWM
LHNSGFRNYNTSVDGRRRELADITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RAAEGEGAAEAYGPSPKNLLSITEDSEGGSPNYSPSPKELDPSPAPESKERKPSDEGGGG
SGSPTPGAKLGGSYLPPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSM
CKDLNSANQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAVS
ELKMGRYWSKEERKQHVVRAKEQRRRREFMMQSRLDCLKEQQGADDRKEMNILELSHKKM
MKKRNKKIFDNWMTIQELLTHGAKSPDGTRVYNSFLSVTTV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgctctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgtgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgtctc
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgcggctgcggccaggtggtcaagctacaacagctgcccgag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgagacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaggagggctgcgggctgcccctgacgcaaggcgagcagcgcgccggaggccac
tgttgtgcgcgggccctgcgggcgcacaacgccgcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgagggccggcaagcgcgagaagtccctggtggcg
cagctggccgccgcacagctggagctgcagatgaccgctctgcgctaccagaagaagttc
accgagtacagcgcgcgccttgactcgcttagccgctgcgtggctccgccgcccggcggc
aagggtgaagaaacaaaaagcctgactctagtcctgcatcgggactctggctccttggga
ttcaacatcattggtggccggccgtgtgtggacaaccaagatggatcgtccagtgaagga
atctttgtatccaaaatagttgacagcgggccggcagccaaggacggaggcctgcaaatt
cacgacaggattattgaggtcaatggcaaagacttatccagagcaactcatgaccaggct
gtggaagccttcaagacagccaaggaacccatcgtggtccaggtgttgaggagaacacca
cggaccaaaatgttcactcctccgtcagagtcacagatggtggacatgggaacacagaca
gacatcacctttgagcacatcatggccctgagcaagatgtcctcgcccaccccgcctgtg
ctggatccctatctcttgccagaggagcatccctcagcccatgaatactatgatccaaac
gactacatcgcaggcatccatcaggagatggacagggaggagctggagctagaggaagtg
gatctctacagaatgaacagccaggacaagctgggcctcacggtgtgctaccggacagat
gatgaagatgacattggcatctatataagcgagattgaccctaacagcattgcggccaag
gacgggcgcatccgagaaggagaccgcattatccagattaatggaatagaggtacagaac
cgtgaagaggctgtagctctgctaaccagtgaagaaaacaagaacttctcattgctaatt
gccaggcccgagctccagctggacgagggctggctggatgacgacaggaacgactttctg
gatgacctgcacatggacatgctggaggagcagcaccaccaggccatgcagttcacggcc
agcgtcctgcagcagaagaagcacgaggaagacgggggaactacagacacggccaccatc
ctgtccaaccagcacgagaaagacagcggcgtgggccggacggacgagagcacacgcaat
gacgagagctcggagcaggagaacaacggcgacgatgcccctgcggcctccccgccgctg
gccgggcagaggaagctcacttgcagccaggacaccctgggcagcggcgacctgcccttc
agcaacgagtccttcatctcggccgactgcgccgacgccgactacctgggcatccccgtg
gacgagtgcgagcgcttccgcgagctgctggagctcaagtgccaggtgaagagcgccggc
ccctacggcctctactaccccggcagcaccctggacgccagcaagagcgaccccgagagc
gtggacaaggagctagagctgctcaacgaggagctgcgcagcatcgagctggagtgcctc
agcatcgtgcgcgcgcacaagatgcagcagctcaaggagcagttccgcgagccctggatg
ctgcacaacagcggcttccgcaactacaacaccagcgtggacgggcgcaggcgcgagctc
gcggacatcaccgagctgcccgagaagtccgacaaagacagctcgagcgcctacaacacc
ggcgagagctgccgcagcaccccactcaccttggagatgtcccccgacaactccctgcgg
agggcggccgagggagaaggtgccgcggaagcttacgggccgtcccccaagaacctgctc
tccatcacggaagattccgaggggggctccccgaactacagcccttcccctaaggagctg
gatcccagcccggctccggagagcaaagagaggaagcccagcgacgaaggtggcggcggc
agcgggagccccacccccggcgcaaagctgggaggctcgtacctgccgcccttcccgcac
tcgccctacaagcacgcccacatccccgcgcacgcacagcactaccagagctacatgcag
ctgatccagcagaagtcggccgtcgagtacgcgcagagccagatgagcctggtgagcatg
tgcaaggacctgaactccgccaaccagtcggagccgaggatggagtggaaggtgaagatc
cgcagcgacggcacgcgctacatcaccaagcgcccggtgcgggatcgcctgttgcgggag
cgcgcgctgaagatccgagaagagcgcagcggcatgaccacggacgacgacgcggtgagc
gagctgaagatggggcgctactggagcaaggaggagaggaagcagcacgtggtgagggcc
aaggagcagaggcggcggcgcgagttcatgatgcagagccggctcgattgcctgaaggag
cagcagggggccgacgacaggaaggagatgaatatcctcgaactcagccacaaaaagatg
atgaagaagaggaataaaaagatatttgataactggatgacaatccaagaactcttaacc
cacggcgcaaaatcgccagacggcactagagtatacaattcattcctctcggtgactact
gtataa
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integrated database retrieval system
