Bos taurus (cow): 509935
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Entry
509935 CDS
T01008
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
bta
Bos taurus (cow)
Pathway
bta03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
509935 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bta01009
]
509935 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bta04515
]
509935 (PCDH9)
Protein phosphatases and associated proteins [BR:
bta01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
509935 (PCDH9)
Cell adhesion molecules [BR:
bta04515
]
Cadherins
Protocadherins
509935 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
RCR
V_ATPase_I
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
509935
NCBI-ProteinID:
XP_002691922
BGD-bta:
BT21574
UniProt:
F1MMW5
LinkDB
All DBs
Position
12:complement(39460262..40603455)
Genome browser
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNKPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHNKSD
NIPVTPQKCPSSAGFHIQENEEGHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWIKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYVS
TEGHFNNGSHMTDIPLANLKSYKQAGGAIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtacccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagt
agcactggggaaattttcacaacctccaatagaatagacagagaaaaactctgtgctgga
gcctcttatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gattttttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccatcccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccggaaggagaaaag
tggccgcaattgattgttcagcaaaacttggacagagaacagaaagatacctacgtgatg
aaaatcaaagtagaggatggaggcaccccacaaaagtccagcaccgccatcctgcaggtc
acagtaagtgatgtaaatgacaacaagccagtgtttaaagagggtcaggtggaggtgcac
attccagagaatgctcccgtgggcacctccgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggttgcgcctgcaaccaaa
agactctttgctttaaataatactactgggctcattacagttcagaggtccttagaccga
gaggagacagctattcacaaagtgacagtactggctagtgatggcagctctactcctgct
agagcaacggttaccatcaatgtcactgatgtaaatgataaccctccgaacatagacctc
aggtacattataagtcccatcaatggcaccgtgtatttgtctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccgtttcatttgaaggcagtatatgacaaccaatatttg
ttagagacctcctctttgttggactatgagggcaccaaagaattcagctttaaaatcgtt
gcctctgattctgggaagcccagtttaaatcagactgctctggtaagggttaagcttgag
gatgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagatattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctctagggtctttgacagagaagaacaagaaagattcattttt
acagtaactgccagggacaatgggacccctcccctccaaagtcaagcggccgtgatagtt
actgttctggatgagaatgacaatagccctaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaggctgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcatttgacagagagcagcagagttcc
tacacttttgatgtcaaagccactgatgggggacaaccaccccgttcctctactgcaaaa
gtaactataaatgtcatggatgtcaatgacaatagtcctgttgtcatttcacctccttct
aatacttcttttaagttggtgcctctctcagccattcctggctcggtggtagcagaagtt
tttgcagtggatattgacactggaatgaacgctgaacttaagtatacaattgtgagtggt
aacaacaaaggcttgtttcggattgatccagtaacaggtaacatcaccctggaagaaaaa
ccagcaccaactgatgtgggcttgcaccgattggtggtcaacataagtgacttgggatac
cctaagtctctacacacacttgtgcttgttttcctttatgttaatgacactgctggcaat
gcttcctatatctatgacttgattcgtaggactatggagaccccattggacagaaacata
ggggatagcagccaaccctatcaaaacgaggactatctcaccatcatgatcgccatcgtc
gcaggtgccatggtggtcatcgttgtgatttttgtcactgttctggtgcgctgtcgccac
gcatcaagattcaaagcagctcaaaggagcaagcaaggtgccgaatggatgtccccaaac
caggagaacaaacaaaacaagaaaaagaaaaggaagaaaagaaaatctcccaagagctct
cttttgaactttgttaccatcgaagagtccaaacctgatgatgcagttcacgaacctatc
aatgggacaataagcctgccggctgagttggaggagcaaagcataggaagatttgactgg
ggcccggcacctccaaccaccttcaagccgaacagccctgacctggccaagcactacaaa
tccgcttctccacagccggctttccatcttaaaccagacactccggtttcggtgaaaaag
catcacgtgattcaggagctcccgttggacaacacctttgtcgggggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacaacaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgcgggtttccatattcaggagaat
gaagaaggccattacgagtcgcagcgccgggttacctttcacctccccgacggctcccag
gaaagctgcagtgacagtggtctaggagaccacgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctatgaccaggcctctccggac
aagaggaccgaagcagacggcaactctgatcccaactctgatgggcctctgggcccccga
ggattagctgaagctacagagatgtgcactcaagagtgcttggttttgggtcactctgat
aattgctggatgcctcctggcttgggtccatatcaacaccctaaatctcctctctcaacc
tttgcaccccaaaaagaatggatcaagaaggacaagcttgtgaatgggcacaccctgacc
agagcctggaaagaagatagcaacaggaaccagttcaatgaccgtaagcagtatgtctcc
actgaaggccatttcaacaatggcagccacatgacagacattcctttggcaaatctgaag
tcttataagcaagcaggaggtgctattgagagtcctaaggagcaccaactctaa
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integrated database retrieval system
