KEGG   Bos taurus (cow): 510413
Entry
510413            CDS       T01008                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X3
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
bta  Bos taurus (cow)
Pathway
bta03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    510413 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bta03021]
    510413 (TAF5L)
   03036 Chromosome and associated proteins [BR:bta03036]
    510413 (TAF5L)
Transcription machinery [BR:bta03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     510413 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     510413 (TAF5L)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     510413 (TAF5L)
    STAGA complex
     510413 (TAF5L)
    TFTC complex
     510413 (TAF5L)
    SAGA complex
     510413 (TAF5L)
    SLIK complex
     510413 (TAF5L)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd TFIID_NTD2 WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_EIPR1 PEP5_VPS11_N PROPPIN eIF2A Ge1_WD40 WD_LRWD1 Nbas_N Beta-prop_IP5PC_F Mala_s_1-like vATP-synt_AC39 DUF6625
Other DBs
NCBI-GeneID: 510413
NCBI-ProteinID: XP_024842702
BGD-bta: BT26575
Ensembl: ENSBTAG00000034225
LinkDB
Position
28:complement(1545839..1577454)
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYGDADGPVKQGLRLSQSTEEMAASLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLTLIQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRYLQ
SDNNTALCRILAWHIHLDVQPAKRTDYQLYTSGGSFRGEGGGLEPADMPAPILQNEAALE
LLQESIKRVKDGPPSLTTIYFYAFYNTEQLLNTAEVSPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDFLEEEDDEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIR
SSHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgggtccgcacggagcagatccagatggccgtgtcctgctacctcaaacgccgg
cagtacggggatgcggacggtccggtgaagcaaggcctgcggctatcgcagagcactgag
gagatggccgccagcctcacagtccaatcagaatctggttgtgccaacatagtgtccgca
gccccttgccaggcagagccccagcaatatgaagtacagttcggacggctgcggaatttt
ctcaccgattctgactcccagcacagccatgaagtgatgcctctcctctaccctctcttt
gtctacctccatctcaccctgatccagaacagtccgaagagcacagtggaaagcttttac
agccgcttccatggaatgtttctgcagaatgccagccagaaggatgttatcgagcagctc
cagaccactcagaccatccaggacatcctgtctaacttccggctgcgagccttcctggac
aacaaatacgtggttcgtctgcaggaagacagctacaactaccttctccgctacctccag
agtgacaacaacaccgcgctgtgcaggatcctcgcctggcacatccatctggacgtgcag
cccgccaagaggacagactaccagctctacaccagtggtggttccttccgaggcgagggt
ggcggcctggagcccgccgacatgccagcgcccatcctgcagaatgaggccgcgctggag
ctcctgcaggagagcatcaagcgcgtcaaggacggccccccctccctgaccaccatctac
ttctatgccttctacaacacagagcagctgctgaacactgcagaggtctccccggacagc
aagctgcttgcagcaggctttgacaactcctgtataaaactgtggagtctgcgttccaag
aagttaaagtccgaaccccatcaagtagatgtgtcccgcatccacttggcttgtgatttc
ctagaggaggaggatgacgaggacgacaacttaggcacagagatgaaggtcctgcgggga
cactgtgggccagtgtacagcaccaggttcctcgcggacagctcggggctgctctcctgc
tctgaagacatgtccatcaggtactgggacctgggcagcttcaccaacaccgtgctgtac
cagggccacgcctaccccgtgtgggacctggacatcagcccgcacagcctgtacttcgcc
agcgcgtcccacgaccgcacggcccggctgtggtcatttgatcggacgtacccgctgcga
atctacgccgggcacctggcagacgtggactgcgtcaagttccaccccaattcaaactac
ttagccacgggctcaaccgacaagacggtgcggctgtggagcactcagcaggggaactcc
gtgaggctcttcacgggccaccgcggccctgtgctctccctggctttttcccccaacggt
aagtacctggcatcagcaggcgaggaccagcggctgaagctgtgggacttggcatccggg
accctctacaaagagctgcggggccacacggacaacatcaccagcctcaccttcagccca
gacagcagcctggtcgcgtctgcgtccatggacaactccgtgcgtgtctgggacatcaga
agctcacactgtagcacacctgccgatggctcatccagcgagctcgtgggcgtctacacc
ggccagatgagcaatgtgctgagcgtgcagttcatggcctgcaacctcctgctggtgact
ggaatcacacaagaaaatcaggaacattga

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