Bos taurus (cow): 510816
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Entry
510816 CDS
T01008
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bta03041
]
510816 (DDX1)
03016 Transfer RNA biogenesis [BR:
bta03016
]
510816 (DDX1)
Enzymes [BR:
bta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
510816 (DDX1)
Spliceosome [BR:
bta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
510816 (DDX1)
Transfer RNA biogenesis [BR:
bta03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
510816 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
510816
NCBI-ProteinID:
NP_001068936
BGD-bta:
BT15817
Ensembl:
ENSBTAG00000009906
VGNC:
27955
UniProt:
Q0IIK5
LinkDB
All DBs
Position
11:complement(82677432..82717536)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKATIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPESFVVKSQHTGSAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRTLGGGNYKGHVDVLAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttctccgagatgggtgttatgcctgagattgcacaagccgtggaagagatg
gattggcttctcccaactgatatccaggctgaatcgatccccctcatcctaggaggaggt
gatgtccttatggctgcagaaacaggaagtggaaaaactggggctttcagtattccggtt
attcagatagtgtatgaaactctgaaagaccaacaagaaggcaaaaaaggaaaagcgaca
attaaaactggtgcttcagtgctgaacaaatggcaaatgaacccgtatgacagaggatct
gctttcgcaattgggtcagatggtctttgttgtcagagcagagaagtaaaggaatggcat
ggatgcagagccaccaaaggcctaacgaaagggaagcactactatgaggtatcctgtcat
gaccaagggttgtgcagagttgggtggtcttccatgcaagcatccctagatcttggtact
gacaagtttggatttggctttggtggaacagggaagaaatcccacaacaagcagtttgac
aattatggagaggaattcactatgcatgataccattggatgttacctagatatagataaa
gggcatgtcaaattctccaaaaacggcaaagatcttggtctggcatttgaaataccacca
catatgaagaaccaagccctgttccctgcctgtgttttgaagaacgcggaactcaaattt
aactttggggaagaagaattcaagtttccaccgaaagatggtttcgttgccctttccaag
gcgccggagagtttcgttgtcaagtcgcagcacacgggtagcgcacaggtggcgcaaaca
aagtttctccccaatgctccaaaagccctcatcgtcgagccttcccgggagttggctgaa
caaactctgaataacgtcaagcagtttaagaaatacatcgataatcctaagttaagggag
cttctgataattggaggtgtcgcagcacgggatcagctctctgttttggataatggggtg
gatattgtcgttggcactccaggaagactggatgatctggtgtctaccggaaagctgaac
ttatcccaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggttac
tctgactttatcaataggattcacaatcagattcctcagattacctctgatggaaaaaga
cttcaggtgattgtgtgctcagccactttgcattcttttgatgtgaagaaactgtctgag
aagatcatgcactttcccacgtgggtcgatttgaaaggagaggattccgtcccagatact
gtccaccatgttgttgtcccagtgaaccccaaaacggacaggctctgggaaaggcttggg
aaaagccacattaggactgatgaagttcatgcaaaagataacacaagacctggtgctaac
agtccagagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgagcc
atcaaggaacacaagatggatcaagcaattattttctgtagaaccaagatcgactgtgac
aacttggagcagtattttatgcagcaaggaggaggacctgataaaaagggacatcagttc
tcgtgtgtttgtcttcatggtgacagaaagcctcatgagaggaagcaaaacttggaaaga
ttcaagaaaggagatgtcagattcttgatttgcacagatgtagctgccagaggaattgat
atccacggtgttccttatgtcataaatgtcaccttgcctgatgaaaaacaaaactatgtc
catcgcattggcagagtaggaagagctgaaaggatgggtctggccatttccctggtggca
acagaaaaagagaaggtttggtatcatgtatgtagcagccgtggaaaagggtgttataac
acaagactcaaggaagatggtggctgtaccatatggtacaatgagatgcagttgctgtcc
gagatagaggaacacctgaactgtaccatttctcaggttgagccagatataaaagtacca
gtagatgaatttgatgggaaagttacttacggccagaaaagaactcttggtggtggaaac
tataaaggccacgtggatgttttggctcctacggttcaagagttggctgcccttgaaaag
gaggcccagacgtctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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