KEGG   Bos taurus (cow): 511168
Entry
511168            CDS       T01008                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bta03400]
    511168 (MDC1)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    511168 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 511168
NCBI-ProteinID: XP_024839889
BGD-bta: BT12294
Ensembl: ENSBTAG00000025526
VGNC: 31328
UniProt: E1BI26
LinkDB
Position
23
AA seq 1925 aa
MEDTQILNWEVEEEEEVEERPSESLRCSLEPLGQLRIFSSSYGPEKDFPLYLGKNMIGRM
PDCSVALPFSSISKQHAVIEISAWDKAPVLRDCGSLNGTQILRPPKVLGPGMSHRLRDRE
LILFADLPCQYHRLDVPRPFVSRGPLTVEETPRVQGGTQPPRLLLAEDSEEEVDSLLDKC
VVKGPRTSSLATVVPESDEEGPSPAPDGPGPPSAFNLNSDTDEEESQESGAGEASSAPRR
GTAAETEQPKPVTAEIQIEKDQCSVKERNRDTEIERDVKNGVVPTGVILERSQPSGEDSD
TDVSDESGPPRRLAGVRPKRAWSCNFIDSDTDGEDKGIPAAPAVVPMKERQIFHEAGTQS
PQAPGVACRQESPADGDTDIEEGEAPLDRSQASMVIDSNTDDEEEVSAALTLARLRESQA
GKWNRDPDAEEDRAQPVALLERSQASARGDSDTDVEEEGLPVGRRGMVPKGHMDREYSKK
SQHPPRDSDTEGKKDESSPGVHLERSQASAQVEDEVPLGPAVALPEKHQVQGIVWTHHTD
AEAEGGPAQLPVLRLEEARPPLAGDCELDAENTSSAAAGVRKSQLPAEKDAGTTWAAAIP
EQDRTLATRTQGGSSTAPGEQDLLPVSRENLANPVVDTGTPREPQPQREGAQTTTGREKE
PHGNRATDSGESLHDSEDLDLPATQCFADRENQSLEAAPSMEDEPTQAFLFTLPQEPGPS
CCSSQATGSLNEAWEVLATQPFCPREYEASETQTAVTLLDTRASCPPPSRTAQQEQHSES
PVHAEALGMEGRGMQTVEKDMGTQRETAERVIPEGGPPQNETKKLPSEGEREDVTGEEEL
IGGIQGREQNQVLARDTQSQESDKTVKSASTGRGMEIVKLETETPKETQEKEREKQTLAG
EIFESEAGKLVAERESEVGGLEVKGPQELLDRGPQMRETEAGGQDQKGQASGPPSEPGAG
AGDLQGFTSDPVASGSQAGGGRGAPGSPRRQQRGDLNFEMPPAEKASRGDQESPDACLPP
AAPEASAALPNSLISQMQKHPAPQSLLFPSPAPLELPIPRTRRNESQEAPETPFSSELNS
VHPEPKVRPQGSSPVSSLPLEPHPATPTGQPIALEPTSGVSGSGTHSSFDVTASSVVPTA
LALQPSTSTDQPVTPKPTLGAPRGRAQRSSVKTPEPSVRIDQPIAPELTAKATRGRAQRS
SVKTPKPDNSTTPKPQPSTSTDQPVTPKPTSQAPRGRTPKSSAKTPEPAVPTASELQPAA
PKDQPVAPELTSRATRGRTQRSSIKTSKPDTSTAPKPQPSTSTDQPVTPKPTSRASRGRT
PRSSTKTPEPVVSTASELQPSALTDQPITPELTSRATRGRAQRSSVKTPDPVTTTTPELQ
PSTSTDQLVTPKRPSRAPRGRTRRSSAKTPEPVVPTASELQPSAPADQPVGPWATQCRRH
RSSVKTPEPVVPTVPEPQPSTSKDQSVAPEPTSQATQSQTHRSSVKTSQPTEPTAPDLKP
SSPTDQPVTPKVIAQGGPSRTRRASTASAVLVPTTPEFQSPVRSEQPLSPDPIPEVNCSL
RPRATRRHGSPTAHVHEPCTTPPEPNSRSSRNQTHGAMKAAKPLSTISEPAFAQLPEAPP
HTPQMPKEEAADGSGFTPEPQPRASQNRKRPSATAHSPPLQKRLQRGRVPQKAASLKEEE
NPAVRPRKEEGVVIPGPGKRRREQTEEESQGRPSRSLRRTKPVQESTAPKVLFTGVVDAR
GERTVLALGGSLASSVAEASHLVTDRIRRTVKFLCALGRGIPILSLAWLHESRKAGCFLP
PDEYLVTDPEQEKNFGFSLREALSRARERRLLEGYEIHVTPGVQPPPPQMGEIINCCGGA
ILPSMPRSYKPQRVVITCSQDFPRCAVPYRVGLPVLSPEFLLTGVLKQEVKPEAFAFSTV
EMSST
NT seq 5778 nt   +upstreamnt  +downstreamnt
atggaagacacccagattttaaactgggaagttgaagaagaggaggaggttgaagagaga
cccagtgaatctctgaggtgtagcttggagcccctagggcagctgcgtatcttcagtagt
tcctacggaccagaaaaagacttcccactctacctggggaagaacatgataggccgaatg
cctgattgctctgtggccctgcccttttcatcaatctccaaacaacatgcagtgattgaa
atctctgcctgggacaaggcgcctgtcctccgggattgcgggagcctcaatggcactcaa
atcctgcggcctcctaaggtcctgggccctgggatgagtcatcgtttgcgggaccgggag
ttgattctctttgctgacttgccctgccagtaccatcgcttggatgtcccccggcctttt
gtctctcggggccctctaactgtagaggagacacccagggtacagggaggaactcaaccc
cccaggcttctgttggctgaggactcagaggaagaagtagattcccttttggacaagtgt
gtggtgaaaggaccaaggacctcctctttggcaacagtcgttccagagagtgatgaagaa
gggccttcccctgccccagatgggcccgggccaccttctgccttcaacttgaacagcgac
acagatgaggaagaaagtcaggaatcaggagcaggggaggcctcttcagctcccagaaga
ggtaccgctgcagagacagaacagcctaaacctgtcacagccgaaatccagattgagaag
gatcagtgttccgtgaaggagaggaacagggacacagaaatcgagagggatgtgaagaat
ggggtggttccgactggagtgattctggagaggagccagccttctggggaggacagtgac
acagatgtgagtgatgagagtgggcctccaagaaggcttgctggggtccgtccgaaaagg
gcctggtcttgtaacttcatagacagtgatactgatggggaggacaaggggatccctgct
gccccagcagtggttcccatgaaggagaggcagatcttccacgaagctggtacacagagc
ccccaggcacctggtgtggcatgtcggcaggagagcccagctgatggtgatacagatata
gaggagggagaggcccccctggacagaagccaagcctccatggtgatcgacagcaataca
gacgatgaggaagaagtctcggcagcactgacactggcacgtctaagagagagccaggct
ggtaagtggaaccgagatccagatgcagaagaggacagggcccaaccagtggcccttctg
gagcgaagccaggcctctgctaggggagacagtgacacagatgtggaggaagaggggctc
ccagtgggaaggaggggaatggttcccaagggtcacatggacagggaatattcaaaaaag
agccagcatcctcccagggacagtgatacagaggggaagaaagatgagagctctccgggg
gtccacctggagagaagccaggcctctgcacaagtggaggacgaggtcccactggggcca
gctgttgcacttccggagaaacatcaggtacaaggcatagtgtggacacatcacaccgat
gcggaggcagaagggggcccggcacagctccccgtgctgcgtctagaggaagcccggcct
cctctagctggggactgtgagctggatgcggagaacacatcctcagcagcagctggtgtc
agaaagagccagcttccggcggaaaaagatgctgggaccacgtgggccgcagccattcct
gaacaggacagaacacttgccaccaggacccagggtgggtcatccacggcaccaggggag
caggaccttctcccggtctcaagggaaaacctagcaaatccggtggtggatacaggcact
ccacgggagccccagccacagagagagggggcccagaccaccacaggaagggagaaagaa
ccacatgggaatagggccacagactctggagagagcctccatgattctgaagatctggac
ctaccagctacccagtgctttgcagacagagagaatcagagcctggaagcagcccccagc
atggaggatgagcccacccaggccttcctgtttactctgccccaagagcctggcccttcc
tgttgcagctcccaggccacaggttccctgaatgaggcatgggaggtcttggcgacacag
ccattctgtccgagagagtatgaggcctccgagacccaaaccgctgtcaccctccttgac
acccgtgcatcttgcccccctccatctaggacagcacagcaagagcaacattcagagagc
ccagtccatgcagaagcactggggatggaaggcagagggatgcagaccgtggagaaagac
atgggtacccaaagagaaacagcagagagggtgatccctgagggagggccaccgcagaat
gaaaccaagaaactgccctcggaaggagagagggaagatgtgacgggagaggaagaatta
atcggggggatacagggtagagaacaaaatcaggtgttagctagagatactcagagccaa
gaatctgacaaaacagtgaaaagtgcaagtactggaaggggaatggagattgtaaagtta
gaaactgagacacccaaggaaacacaggagaaagagagagaaaagcagactctcgcaggg
gaaatatttgagagtgaagcagggaaactggtagcagagagagagagtgaggtaggtggg
ttagaagtcaagggaccccaagagctactggacagaggcccacagatgagggagacagag
gcggggggccaggaccagaaaggccaagcctctggtccgccatcagagcctggagcaggg
gcaggagaccttcagggatttacttcagatccagtagcttctgggagccaggcaggtgga
ggaaggggagccccagggagccccaggaggcagcagagaggtgacttgaatttcgagatg
ccacctgctgagaaggcttccaggggtgatcaggaatccccagatgcttgtctgcctcct
gcagcgcctgaagcctcagccgcactcccaaactccctcatctctcagatgcaaaaacat
cccgcacctcagtccctcctttttccctctccagctcctttagaactgcctattcccagg
accagacgaaatgagagtcaggaagctccagagactcccttctcctcagagctgaactct
gtccacccagaacccaaagtcaggccccaggggtcctctccagtttcttctctacccctt
gagccccaccctgccacccccacaggccagcctattgcccttgagcccacatctggggtc
tctgggagcgggacacatagttcctttgatgtaactgcctcatcagttgtccccacagcc
cttgcactgcagccatccacctccacagaccagcctgtcacccctaagcccacacttggg
gcccctcggggcagggcacagaggtcttctgtcaaaacccctgaacccagtgtccgcata
gaccagcctattgcccctgagctcacagctaaggccactcggggcagggcacagaggtct
tctgtcaagactcccaaaccagataactccacaacacccaagccccagccttccacttcc
acagaccagcctgtcacccccaagcccacatctcaggcccctcggggcaggacacctaag
tcttctgccaagactcctgaaccagctgtccccacagcctctgagctccagcctgctgcc
cctaaagaccagcctgttgctcctgagctcacatctagagccactcggggcaggacacag
aggtcttctatcaagacttccaaaccagatacgtccacagccccgaagccccagccttcc
acttccacagaccagcctgtcacccccaaacccacgtctcgggcctctcgaggcaggaca
cctaggtcttccaccaagactcctgaaccagttgtctccacagcctctgagctccagcct
tctgccctcacagaccagcctatcactcctgagctcacatctagggctactcggggcagg
gcacagagatcctctgtcaaaacccctgatccagttaccaccacaacacctgagctccag
ccttccacctccacagaccagcttgtcacccccaaacgcccatctcgggcccctcgaggc
aggacacgtaggtcgtctgccaagactcctgaaccagttgttcccacagcctctgagctc
cagccttctgcccctgcagaccagcctgttggtccttgggccactcagtgtagaagacat
aggtcttctgtcaagaccccggaaccagttgtccccacagtccctgaacctcagccttct
acttctaaagaccagtctgtcgctcctgaacccacatctcaggccactcagagccaaaca
cataggtcttctgtcaagacatcccagccaactgaacccacagcccctgacctcaaacct
tcctcccccacagaccagcctgtcactcccaaggtcatagctcagggtggtccaagcagg
acacgaagggcttctacagcaagtgctgtgctggttcctactacccctgaattccagtct
ccagtccgctcagaacagcctctttcccctgaccccatccccgaagtcaactgcagcctg
aggccgagggccactaggagacatgggtctcccacagctcatgttcatgagccctgcacc
acaccccctgaacctaactctcgctcctcaaggaaccaaacacatggggcaatgaaggca
gccaagccccttagcaccatttctgagcctgcctttgcccagctccctgaggcaccgcct
cacactccccagatgccaaaggaggaggcagctgatgggtcaggcttcaccccagagccc
cagcctagggcctctcaaaaccgcaagaggccttcagctactgcacattcacctccactt
caaaaacggctccagagagggagagtccctcagaaggcagcatcccttaaggaagaagaa
aatccagcagtaaggccgaggaaggaagagggtgtagtgattccaggtccaggcaagaga
aggagagagcagacagaggaagagtcccagggaagaccgagccgtagcctgcgacggacc
aaacctgtccaggagtccacggcccccaaagtgctcttcacgggcgtggtggatgctcgc
ggagagaggacggtgctggccctggggggcagtctggccagctcagtggctgaggcttct
cacctggtgactgatcggatccgccgtacggtcaagtttctgtgtgccctgggccggggc
atccccatcctctccctggcctggctgcatgagtcccgcaaggcaggctgcttcttgccc
ccggacgaatatttggtgactgatcctgagcaggagaagaacttcggcttcagccttcgg
gaggccctgagccgagctcgggagcgaaggctgctggagggctatgagattcacgtgacc
cccggagtccagccaccgccacctcagatgggagaaatcatcaactgctgtggaggcgcc
atcctgcccagcatgcctcggtcctacaagcctcagagggtcgtgatcacatgttcccag
gacttccctcgatgtgccgttccatatcgggttgggctgcctgtcctctcacccgagttc
ctgctgacgggagtactgaagcaggaagtcaagccagaggcctttgccttctccactgtg
gaaatgtcatccacctga

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