Bos taurus (cow): 511236
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Entry
511236 CDS
T01008
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bta03021
]
511236 (TAF1B)
Transcription machinery [BR:
bta03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
511236 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
zf-RRN7
Rrn7_cyclin_N
NOB1_Zn_bind
Motif
Other DBs
NCBI-GeneID:
511236
NCBI-ProteinID:
NP_001068971
BGD-bta:
BT18501
Ensembl:
ENSBTAG00000007543
VGNC:
35570
UniProt:
Q1JQD6
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All DBs
Position
11:complement(87654482..87710164)
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AA seq
590 aa
AA seq
DB search
MDLEEAREFRERCSQCAAVSWGLTDEGKYYCTSCHNVTERSREVIDTGAIPNTKIQAINR
GLKRKRKLEKGWDWYVCEGFQHILYQQAEALQSLGVGPELKNEVLHNFWKRYLQKSKQAY
CKNPVYTSRRKTTVLEDNLSHSDWESEPELLSDMSCLSFAESGAESQPDVRTPKPFPIIK
ASHSETTSVCSGSLDGVEYSLRKEKGVMKMSVPRTLAFCYLSLLWQRETITLSDLLRFVE
EEHIPYIHAFQHFPEEMKLYGRDKGIFAIESWPNYEVIFKKIIEVATFLDLPRFPDITEN
CYLHPNILCMKYLMEVNLPDEMHNVTCLVVKSTGIGEVDFLRFDPIAKKAKTVKYDVQAV
AVIVVALKLLFLLDDNLEWSLSNIAKKYNEKNKEDKPWFDFRKWYQVMKKAIDEKKQKWE
EARAKFLWKGEKPLYYSAIDRPVVYKRREMVVSLQKQFSTLVDSAPNVEKKKPSSFQFNW
TEEDSERPCFHGHSLQGVLQQKGQSLTTKNSLYWLSTQKFCKSHCKHVTTYEESNFSLSY
QFILNLFSFLLRIKTSFLHEEVSLIEKRLFKAKYNKTNKKSSRSRKTRKY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaggaggcgagagagttcagagagcgctgctctcagtgtgccgctgtttct
tggggtcttactgatgaaggcaaatattattgcacttcttgccacaatgttacagaaaga
tctagggaagttatagacactggggctattcctaatactaaaatacaagccatcaaccgg
ggacttaaaagaaaacgaaaacttgagaaaggctgggattggtatgtgtgtgaaggtttt
cagcacatactttatcaacaagcagaagccttacagagccttggagtaggcccagagtta
aagaatgaagttttgcataatttttggaagcgctaccttcagaagagcaagcaggcatac
tgtaaaaacccagtttataccagcagaaggaaaactacggtattagaagataatttgagc
cattcagattgggagagtgagcctgagctgctgagtgacatgagctgtctatcttttgct
gagagtggagcagagtctcagcctgatgtccgcactccaaagcctttccccatcatcaaa
gcatcacattcagaaacgacctctgtctgttctgggtctcttgatggagtggaatactcg
ttgcggaaggagaagggggtcatgaagatgagtgtaccacggacgctagccttctgctat
ctgtcattactttggcagagagagacaattactctttcagatcttttgagatttgttgaa
gaagaacatattccttacatacatgcttttcagcattttccagaagagatgaaattatat
ggacgtgacaaaggaatctttgccatagagtcttggcctaactatgaagttatctttaaa
aaaataattgaagttgccacatttttagatttgccacgttttccagacataactgaaaac
tgctatcttcatccaaacatcttgtgtatgaaatacttgatggaggtcaatctccctgat
gaaatgcataatgtaacctgcctagtggtaaaatcgactggaataggagaagtggatttt
ctaagatttgatcctatagctaaaaaggcaaaaactgttaaatatgatgtgcaagctgta
gctgtcattgtagtggcattgaaactgctctttttattggatgacaatttagaatggtct
ttgtctaatattgccaagaaatataatgaaaagaacaaagaagataaaccatggtttgat
ttcagaaaatggtaccaagttatgaagaaagctattgatgagaaaaaacaaaagtgggag
gaagccagggcaaagtttctgtggaaaggtgaaaagccactctactactcagccattgac
aggccggtagtgtataaaagaagagaaatggtggtgagtcttcagaaacagtttagcaca
ctggtggattcagcaccaaacgttgaaaaaaaaaagccttcaagttttcagttcaactgg
actgaagaggacagcgagaggccttgtttccatgggcatagcctccagggagtcctgcag
cagaaaggccagtccctgacaaccaagaattccctctactggctgagtacgcagaagttc
tgtaaaagccattgtaagcatgtgacaacctacgaagaatccaatttttctctgagttac
cagtttatactaaatctcttctccttcttgctgagaataaagacttcctttctccatgaa
gaagtgagcttaatagaaaagagactttttaaagcaaaatataataaaacaaacaagaaa
tcttcaagatccaggaaaacaagaaaatattga
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