Bos taurus (cow): 511422
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Entry
511422 CDS
T01008
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain precursor
KO
K06238
collagen type VI alpha
Organism
bta
Bos taurus (cow)
Pathway
bta04151
PI3K-Akt signaling pathway
bta04510
Focal adhesion
bta04512
ECM-receptor interaction
bta04518
Integrin signaling
bta04820
Cytoskeleton in muscle cells
bta04974
Protein digestion and absorption
bta05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
511422 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
511422 (COL6A1)
04518 Integrin signaling
511422 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
511422 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
511422 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
511422 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
511422 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bta04147
]
511422 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
bta00536
]
511422 (COL6A1)
Exosome [BR:
bta04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
511422 (COL6A1)
Glycosaminoglycan binding proteins [BR:
bta00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
511422 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
511422 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
511422
NCBI-ProteinID:
NP_001137337
BGD-bta:
BT10745
Ensembl:
ENSBTAG00000011802
VGNC:
27570
UniProt:
E1BI98
LinkDB
All DBs
Position
1:145668730..145687976
Genome browser
AA seq
1027 aa
AA seq
DB search
MRLPRALLPLLLQACWASAQDDPVASRAIAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKSFTKRFIDNLNDRYYRCDRNLVWNAGALHYSDEVEIIRGLTRMPSGRDELKSSVDAV
KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLVVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEVISQTIDTITDMIK
NNVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM
KGEKGSRGEKGSRGPKGYKGEKGKRGMDGVDGMKGETGFPGLPGCKGSPGFDGIQGPPGP
KGDPGAFGLKGQKGEPGADGEPGRPGSTGPPGDEGEPGEPGPPGEKGEAGDEGNAGPDGA
PGERGGPGERGPRGTPGARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGD
EGPPGTEGPKGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK
GYPGLKGDEGEAGDPGEDNNDIAARGAKGAKGYRGPEGPQGPPGHVGPPGPDECEILDII
MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFIVKVIDRLSKDELVKFEPGQSHA
GVVQYSHNQMQEHVDLRDPNIRNAQDLKEAIKKLQWMGGGTFTGEALQYTRSRLLPPTPN
NRIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDVFGLAAGSDQLNVISCQGLAPQ
GRPGISLVKENYAELLDDGFLKNITAQICIDKKCPDYSCPITFSSPADITILLDGSASVG
SHNFDITKRFAKRLAERFLTASRTDPGQDVRVAVVQYSGTGQQRPERAALQFLQNYTVLA
NTVDSMDFFNDATDVMDALGYVTRFYREASSNAAKKRLLLFSDGNSQGATPAAIEKAVQE
AQRAGVEIFAVVVGRQVNEPHVRVLVTGKAAEYDVVFGERHLFRVPSYQALLRGVFYQTV
SRKVALD
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgccccgcgctctgctccccctgctgctgcaggcctgctgggcctccgcgcag
gacgaccccgtggcctcaagggccatcgctttccaagactgccctgtggacctgttcttt
gtgctggacacctccgagagcgtggccttgaggctgaagccctatggggccctggtggac
aaggtcaagtccttcaccaagcgcttcattgacaacctgaacgacaggtactaccgctgt
gaccgcaacctggtgtggaatgcgggcgcgctgcactatagcgacgaagtggagatcatc
cgcgggctcacgcgcatgcccagcggccgcgacgagcttaagagcagcgtggacgccgtc
aagtacttcggaaagggcacctataccgactgcgccatcaagaagggtctggaggagctg
ctcgtggggggctcccacctaaaggagaacaagtacttggttgtggtgactgacgggcac
cccctggagggctacaaggagccctgcgggggcctggaggatgctgtgaacgaggccaag
catctgggcatcaaagtcttctccgtggccatcacgcccgaccacctggagccacgtctg
agcatcatcgccacggaccacacgtaccggcgcaacttcacggcggctgactgggggcag
agccgcgacgccgaggaagtcatcagccagaccatcgacaccatcaccgacatgatcaaa
aataatgtggagcaagtgtgctgctccttcgagtgccagcctgccagaggaccccccggg
cctcgaggcgaccccgggtacgagggagaaagagggaagccggggctcccgggagagaaa
ggagaagctggagaccctggaagacctggggaccttggacccgtcggctaccagggcatg
aagggagaaaaagggagccgaggggagaagggctccaggggacccaaaggctacaagggc
gagaagggaaagcgtggcatggacggcgtggatggcatgaagggggagacagggttccct
ggcctgccaggctgcaagggctcgcccggattcgatggtatccaaggaccccccgggccc
aagggtgacccaggtgccttcggactgaaaggacagaagggtgagcccggagcagacggg
gagcctgggaggcccgggagcacggggccgcctggagatgagggtgagcctggagagccc
ggtcccccgggagagaagggagaagccggcgatgagggaaatgcaggaccagacggagcc
cccggagagaggggcggccctggggaaagaggacctcgagggaccccaggtgcacggggc
cctagaggagacccgggtgaagctggaccccaaggtgaccagggacgagaaggccccgtc
ggtgtccccggtgacccgggcgaggctggccccattgggccgaaaggataccgaggtgat
gagggaccccctgggaccgagggccccaaaggagctccggggcctgcaggcccccccgga
gaccccgggctgatgggtgagaggggtgaagacggcccccccgggaatggcactgaaggc
ttccccggctttcccggctatccaggcagcagaggtcctcctgggataaacggcaccaaa
ggctaccctggcctcaagggggacgagggagaagccggggaccccggagaggacaataat
gacattgctgcacgaggcgccaaaggagcaaagggctaccgaggtcctgaaggcccccag
ggacccccaggacacgtgggaccaccggggccagacgaatgcgagattttggacatcatc
atgaaaatgtgctcttgctgtgagtgcaagtgcgggcccatcgacatcctcttcgtgctg
gacagctctgagagcatcggcctacagaacttcgagatcgccaaggacttcatcgtcaag
gtcattgaccggctgagcaaggatgagctggtcaagtttgagcctgggcagtcgcatgca
ggcgtggtgcagtacagccacaaccagatgcaggagcacgtggacctgagggaccccaac
atcaggaatgcccaggacctcaaggaggccatcaagaagctgcagtggatgggcggcggc
accttcacgggcgaggccctgcagtacacccggagccggctgctgccacccactccgaac
aaccgcattgccctggtcatcaccgatggccgctcagacacccagagggacaccacccca
ctcagcgtgctctgcggccctgacatccaggtggtctctgtgggcatcaaggatgtcttt
ggcttggctgcgggctccgaccagctcaacgtcatctcctgccaaggcctggcaccccag
ggacggccgggcatctcattggtcaaggaaaactacgccgagcttctggacgatggcttc
ctgaagaacatcactgcccagatctgcatagacaagaaatgtccagattacagctgccca
atcaccttctcctccccggccgacatcaccatcctcctggacggctccgccagcgtgggc
agccacaactttgacatcaccaaacgctttgccaagcggctggcagagcgcttcctgaca
gcgagccggacagacccgggccaggacgtgcgtgtggcagtggtgcagtacagcggtacg
gggcagcagcggccggagcgcgcggccctgcagttcctgcagaactacaccgtgctggcc
aacaccgtggactccatggacttcttcaatgacgccaccgacgtcatggacgccctgggc
tacgtgacccgcttctaccgcgaggcctcgtccaacgccgccaagaagaggctgctgctc
ttctcggatggcaactcgcaaggtgccacgccggccgccatcgagaaggcggtgcaggag
gcccagcgggcgggcgtggagatcttcgcggtggtggtgggccgccaggtgaacgagccc
cacgtgcgtgtcctggtcactggcaaggcggctgagtatgacgtggtcttcggcgagcgc
cacctgttccgcgtgcccagttaccaggcgttgctgcggggcgtcttctaccagacggtg
tccaggaaggtggcgctggactag
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