Bos taurus (cow): 511602
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Entry
511602 CDS
T01008
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
bta
Bos taurus (cow)
Pathway
bta04151
PI3K-Akt signaling pathway
bta04382
Cornified envelope formation
bta04510
Focal adhesion
bta04512
ECM-receptor interaction
bta04820
Cytoskeleton in muscle cells
bta04926
Relaxin signaling pathway
bta04933
AGE-RAGE signaling pathway in diabetic complications
bta04974
Protein digestion and absorption
bta05146
Amoebiasis
bta05165
Human papillomavirus infection
bta05200
Pathways in cancer
bta05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
511602 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
511602 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
511602 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
511602 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
511602 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
511602 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
511602 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
511602 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
511602 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
511602 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
511602 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
511602 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bta04147
]
511602 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
bta00536
]
511602 (COL4A5)
Exosome [BR:
bta04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
511602 (COL4A5)
Glycosaminoglycan binding proteins [BR:
bta00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
511602 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
511602
NCBI-ProteinID:
XP_002699908
BGD-bta:
BT12224
Ensembl:
ENSBTAG00000014575
VGNC:
50084
UniProt:
F1N474
LinkDB
All DBs
Position
X:57141392..57392487
Genome browser
AA seq
1685 aa
AA seq
DB search
MKLRGVSLAAGLSLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPPGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGLPGPPGLVIPRPGTGVTVGEKGN
IGLPGLPGDKGDRGFPGIQGPPGLPGPPGPAVIGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGPPGPPGPPGPHIPPSDKICEAGPPGPPGSPGDRGLQGEQGMKGDKGDT
CFNCIGTGVSGPPGQPGLPGLPGPPGSLGFPGQKGEKGHAGATGPKGLSGIPGAPGAPGF
PGPKGEPGDILTFPGMKGDKGDLGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGMAFKG
ERGPPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGVQGGAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGHPGRDGEVGLPGEPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGSPGRIGLEGPSGPPGFPGPKGEPGFGLPGPPGPPGLPGFKGILGPKGDRGFP
GPQGPPGQAGLDGLPGPKGDIGPNGQPGPIGPPGLPGTGFQGPPGPPGIPGPIGQPGLHG
LPGEKGDPGPPGFDVSGPPGERGSPGIPGAPGPMGPPGSPGLPGKAGASGFPGAKGEIGM
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPAGEKGSKGEPGLPGLPGPMDPDLL
GSKGEKGDPGLPGIPGVAGPKGYQGLPGDPGQPGLSGQPGLPGLAGPKGNPGLPGMPGLT
GPPGLKGNMGDMGFPGPQGPKGSFGPPGVPGQPGSPGLPGQKGEKGDPGISGIGLPGLPG
AKGEPGLPGYPGNPGTKGSMGETGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKGISGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPRGLPGL
SGQKGDEGLPGIPGNPGLPGPKGEPGFHGFPGLQGPPGPPGSPGPALEGPKGSPGPQGPP
GRPGPPGPEGPRGLPGSGAIKGERGNPGQPGQPGLPGLKGDQGPPGLQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGVPGSTGPEGDPGLIGPPGPPGLPGPSGQSIVIKGDAGPPGI
PGQPGLKGLQGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP
PGPDGLQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPQGTIQVYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGQSIQPF
ISRCAVCEAPAVVIAVHSQTIQIPRCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgtccttgctggccctgagtctttgg
gggcagcccgcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtgactgt
agtggtataaaaggagaaaagggggagagaggatttccaggtttggaaggccacccaggt
ttgcctggatttccaggtccagaagggcccccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggagaaccgggtagt
ataattatgtcatccctgccaggaccaaagggtaatccaggctatccaggtcctcctgga
attcaaggcccagctggtccccctggtataccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggcccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaagggtgagaagggtgagcaaggtcttcagggcccccctgggcca
cctgggcagatcagtgaacaaaaaagaccaatcgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacccccagggatacgtggtcctccaggtcct
ccaggtggtgtgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaacca
ggcaaagatggagagaatggccaaccaggaattccaggtttgcctggtgatcctggttac
cctggtgaaccaggaagagatggagaaaagggtcaaaaaggtgacactggcctacctggg
cctcctggacttgtaatacctaggcctgggactggtgtaactgtaggagaaaaaggaaac
attgggttacctggcttgcctggagataaaggagatcgaggatttcctggaatacaaggt
ccacccggccttcctggacctccaggacctgcagttataggtcctcctggaccccctggc
tttcctggggaaaggggccagaaaggtgatgaaggcccacctggaatttccattcctgga
tctcctggacttgatggacagcctggggctcctggtcctcctggcccccctggccctccc
ggccctcacatccctcctagtgataagatatgtgaagcaggccctcctggccctccagga
tctccaggtgatagaggactccaaggagaacaaggaatgaaaggtgacaaaggtgacacc
tgcttcaactgtattggaactggtgtttcagggcctccaggtcagcctggtttgccaggt
cttccaggtcccccaggatctcttggtttccctggacagaagggcgaaaaaggacatgct
ggtgcaactggtcccaaaggattatcaggcataccaggagctccaggtgctccaggcttt
cctggacctaaaggtgaacccggtgacatcctcacatttccaggaatgaagggtgacaaa
ggagatttgggttcccctggagctccagggcttcctggtttacctggcacccctggacag
gatggattgccaggacttcctggccccaaaggagaacctggtggaatggcttttaagggt
gaaagaggtccccctgggaacccaggtttgccaggtctcccaggaaatagggggcctatg
ggccctgttggttttggtcctcctggtccagtaggtgaaaaaggcgtacaaggtggggca
ggaaatccaggccaaccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
caaccagggaagcctggcctgcctggtcacccaggcagagacggtgaagtaggtcttcca
ggtgaacctggactcccaggccagccaggcttgccaggaatacctggtagcaaaggagaa
ccgggtatccctggaatcgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccaggacctccaggagcacctggatcacctggaagaatcggtctagaaggtccttctggg
ccaccaggctttccaggaccaaagggagaaccaggatttgggctacctgggccacctggg
cctccaggactcccaggtttcaaaggaatacttggtccaaaaggggatcgtggtttccca
ggacctcaaggtcctccaggacaagctggcttggatgggctacctggaccaaaaggtgac
attggaccaaatggacaacctgggccaattggacctcctgggctgccaggaacaggtttt
cagggaccaccagggccaccaggaattcctggaccaataggccaacctggcttgcatgga
ctaccaggagagaagggggatccagggcctcctggatttgatgtttcaggacctcctggt
gagagaggcagcccagggatccctggagcaccaggtcctatgggacccccaggatcacca
gggctcccaggaaaagcaggtgcctctggctttccaggtgccaaaggtgaaatcggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgatgatggtttgcagggtcagccaggacttcctggccctgcaggagagaaa
ggtagtaaaggagagcctggccttccaggccttcctgggccaatggatccagatctgctg
ggctcaaaaggagagaaaggggaccctggactaccaggtattcctggagttgcagggcca
aaaggttaccagggtttgcctggagacccagggcaacctggactgagtggacaacctgga
ttgccaggactagcaggtcccaagggtaaccctggtctccctggaatgccaggacttaca
ggacctcctggactgaaaggaaacatgggtgatatgggttttccaggcccacagggtcca
aaagggtctttcggacctcctggagttcctggacaacctggctccccaggactacctgga
cagaaaggagaaaaaggtgatcctggtatttcaggcattggtcttccaggtcttcctggc
gcaaagggtgaacctggtctgcctggatacccagggaaccctggtaccaaaggttctatg
ggagaaactggtttgcctggattaccggggacccctggagcaaaaggacaaccaggcctt
cctggattccctggaaccccaggccttcctggaccaaaaggtattagtggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggaggtcgtcctgggccacca
gggcctccaggtgaaaaaggcaagccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccgtggacttccaggactt
tctggtcaaaagggtgatgaaggattacctggcattccaggaaaccctggccttccaggt
ccaaagggtgaaccaggctttcatggtttccctggtctgcagggtcccccaggccctcct
ggttctccaggtccagctctggaaggccctaaaggcagccctggaccccaaggtcctcct
gggagaccaggtccaccaggtccagaaggtccccggggtctacctggaagtggggctatt
aaaggagaaagaggtaacccaggccaacctgggcaacctggtttgcctggtttgaaaggt
gatcaaggtcctccaggactccagggtaaccctggccggccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggatttccaggcatgaaaggacccagtggagta
cctggttcaactggccctgagggggatccaggacttattggcccaccaggtccccctgga
ttacctggtccttcaggacagagtattgtaatcaaaggagatgctggcccaccagggatt
ccaggccagcctggattaaaaggtttacaaggactcccaggacctcagggtttaccaggt
ccaattggccctccaggagatcctggacgcaatggactccctggctttgatggtgcagga
ggacgcaaaggagacccaggtttgccaggccagccaggtactcgtggcttggatggtccc
cccgggccagatggattgcagggtcctccaggtccccctggaacctcttctattgcccat
gggtttctcatcacacgtcacagccagacaacagatgctccacaatgcccacagggaacc
atccaggtgtatgaaggcttttctctcctgtatgtacaaggaaataaaagagctcatggt
caagacttgggaacagccggcagctgccttcgtcgtttcagtaccatgcctttcatgttc
tgcaacatcaataatgtttgcaactttgcttcaagaaatgattattcttactggctctcc
accccagagcccatgccaatgagcatggaacccctgaaggggcagagcatccagccattc
attagtcgatgtgcagtatgtgaagctccggccgtggtgattgcagtccacagtcagacc
atccagattccccgttgtcctcagggatgggattctctctggattggttattccttcatg
atgcacacaagtgcaggggcagagggctcaggccaagccctggcctcccctggttcctgc
ttagaagagtttcgttcagctcccttcattgagtgtcatgggcgggggacctgcaactat
tacgccaactcctacagcttttggctggcgactgtagatgtgtcagacatgttcagcaaa
cctcaatcagaaacgctgaaagcaggagacttgaggacacgtattagccgatgtcaagtg
tgcatgaagaggacataa
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integrated database retrieval system
