Bos taurus (cow): 512136
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Entry
512136 CDS
T01008
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
bta
Bos taurus (cow)
Pathway
bta03008
Ribosome biogenesis in eukaryotes
bta03013
Nucleocytoplasmic transport
bta03015
mRNA surveillance pathway
bta05014
Amyotrophic lateral sclerosis
bta05164
Influenza A
bta05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
512136 (NXF1)
03015 mRNA surveillance pathway
512136 (NXF1)
03008 Ribosome biogenesis in eukaryotes
512136 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
512136 (NXF1)
05168 Herpes simplex virus 1 infection
512136 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
512136 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
512136 (NXF1)
03009 Ribosome biogenesis [BR:
bta03009
]
512136 (NXF1)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
512136 (NXF1)
mRNA cycle factors
Stress granule specific factors
512136 (NXF1)
Ribosome biogenesis [BR:
bta03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
512136 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
UBA_8
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
512136
NCBI-ProteinID:
NP_001069023
BGD-bta:
BT14729
Ensembl:
ENSBTAG00000009488
VGNC:
32375
UniProt:
Q1RMS5
LinkDB
All DBs
Position
29:complement(41099477..41110792)
Genome browser
AA seq
620 aa
AA seq
DB search
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKSGEGNRRSGRGGSSVRSSRLEDDDRDVAM
SDVQDAPRVRYTPYAARPNRRGDNWNERTRIHVTLPLRRDRSAAERGGAGTSQDGTSKNW
FKITIPYGRKYDKSWLLNVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKI
LDRENRRISIIINSSSPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLV
AQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNKLYRLDDLSSIVQKAPNLKILNLS
GNELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAVRERFPKLLRLDGHELPPP
IAFDVEAPTTLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLS
IPFTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSF
VVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNA
SADEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRS
AQAFTHLKAKGEIPEVAFMK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaagtcatacaacgagcacgatgatcgagttagtttccctcaaaga
agaaagaaaggccgaggccctttccggtggaagtccggcgaggggaaccggaggtctgga
agagggggctccagcgttcggtcctcccgcctggaggacgacgacagagacgtagcgatg
agtgatgtccaggatgctccccgagtacgatacaccccctacgctgcacgacccaaccgt
cggggtgataactggaacgagcggactcgaattcatgttactctgcccctgcggagagat
cggtctgctgcagagaggggaggggctggcaccagccaggacgggacgtccaagaactgg
tttaagattacaatcccttacggcaggaaatacgacaagtcatggctcctgaatgtgatt
cagagcaagtgcagtgtcccttttactcccattgagtttcactatgaaaacacacgggcc
cagttttttgtggaggacgccagtacggcctctgctctgaaggctgttaactataagatt
ttggatcgggagaaccgcaggatatctatcatcatcaactcctcttctccaccccattct
gtgcagaatgaactaaagccagaacaagtagagcagctaaagctgatcatgagcaaacga
tatgatggctcccagcaagcacttgacctcaagggcctccgttcagacccagatttagtg
gctcagaacattgacgttgtcctgaaccgtagaagctgcatggcagccaccctgcgaatc
atcgaagagaacatccctgagctattgtccttgaacttgagcaacaacaagctctaccgg
ctggatgacttgtccagcattgtgcagaaagcacccaatctaaagatcctaaatctctct
ggaaatgagctgaagtctgagcgggagttggacaagatcaaagggctgaagctggaagag
ctctggcttgacggaaacaccctgtgcgacaccttccgagaccagtccacttacatcagc
gccgttcgagagcgatttccaaaactattgcgactggatggccatgagttacccccacca
attgcctttgatgttgaagcccccacaacgttaccaccttgcaagggaagctactttgga
acagagaccctgaagaatctggtcctgcacttcttgcagcagtactatgcggtttatgac
tcgggagaccggcagcggctcctggatgcctaccatgatggagcctgctgctcgctgagc
attcctttcaccccccagaaccctgcccgaagcaacttggccgagtacttcaaggatagc
aggaatgtgaagaagcttaaagaccctaccctgcggttccgactgctgaagcacacacgt
ctcaacgtggtggccttcctcaatgagttgcccaaaactcagcatgacatcaattccttt
gtggtagacataagtgcacagacaagcacattgctgtgtttctctgtcaacggagtcttc
aaagaagtggatggaaagtctcgggactccttgcgagcctttacccggacgttcgtcgct
gttcctgccagcaattcagggttgtgcatcgtcaacgatgagctgtttgtgcggaatgcc
agtgctgatgagatccagagagcctttgccatgcctgcacccacaccctcctccagccca
gtgcccaccctctccccagagcagcaggaaatgctgcaggctttctctacccagtctggc
atgaaccttgagtggtcccagaagtgcctccaggacaacaactgggactacaccaggtct
gcccaggcctttactcacctcaaggccaagggtgagatcccagaagtggcattcatgaag
tga
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integrated database retrieval system
