KEGG   Bos taurus (cow): 513080
Entry
513080            CDS       T01008                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
bta  Bos taurus (cow)
Pathway
bta03013  Nucleocytoplasmic transport
bta05014  Amyotrophic lateral sclerosis
bta05164  Influenza A
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    513080 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    513080 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    513080 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    513080 (RAE1)
   03036 Chromosome and associated proteins [BR:bta03036]
    513080 (RAE1)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     513080 (RAE1)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    513080 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st NBCH_WD40 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 513080
NCBI-ProteinID: NP_001015585
BGD-bta: BT22625
Ensembl: ENSBTAG00000010934
VGNC: 33692
UniProt: Q5E9A4
LinkDB
Position
13:complement(58788134..58805841)
AA seq 368 aa
MSLFGTTSGFGSGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttggaacaacctcgggttttggatctggtgggaccagcatgtttggcagc
acaaccacagataatcacaaccctatgaaggatattgaagtaacatcctctcctgatgat
agcattggttgtctatcatttagccccccaaccttgccgggaaactttcttattgcagga
tcgtgggctaatgatgttcgatgctgggaagttcaagatagcggacagactattccaaaa
gcccagcagatgcacacgggacctgtcctagatgtctgctggagtgatgatgggagcaaa
gtatttacagcctcatgtgataaaactgctaaaatgtgggacctcaatagtaaccaggcg
atacagattgcacagcacgatgctcctgtcaaaacagtacattggatcaaagcaccaaac
tacagctgtgtgatgactgggagctgggataagaccttgaagttttgggatacacgatca
tcaaatcctatgatggtgttacagctccctgaaaggtgttactgtgctgacgtgatatat
cctatggctgtggtggcaactgcagagaggggcctgattgtgtatcagttagagaatcag
ccttctgaattcaggaggatagagtctccactgaagcatcagcatcgatgtgtggctatt
tttaaagacaaacagaacaagccgacaggttttgccctgggaagcatcgaggggagagtt
gctatccactacatcaaccccccaaatcctgccaaggataacttcacctttaaatgtcat
cgatctaacgggaccaacacttctgctcctcaggacatctatgcggttaatggaattgcg
ttccatcctgtccatggcacccttgccactgtgggatctgatggtagattcagcttttgg
gacaaggatgccagaacaaaactaaagacttcggaacagttagatcagccgatatcggcc
tgctgcttcaatcacaatggaaacatatttgcgtatgcttccagctacgactggtcaaag
ggacatgaattttataatccccaaaagaaaaattacattttcctgcgtaatgcagctgaa
gagctaaaaccaaggaataagaagtag

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