Bos taurus (cow): 513602
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Entry
513602 CDS
T01008
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bta
Bos taurus (cow)
Pathway
bta04613
Neutrophil extracellular trap formation
bta05014
Amyotrophic lateral sclerosis
bta05034
Alcoholism
bta05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
513602 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
513602 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
513602 (HDAC6)
09165 Substance dependence
05034 Alcoholism
513602 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bta01009
]
513602 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
513602 (HDAC6)
04131 Membrane trafficking [BR:
bta04131
]
513602 (HDAC6)
03036 Chromosome and associated proteins [BR:
bta03036
]
513602 (HDAC6)
Enzymes [BR:
bta01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
513602 (HDAC6)
Protein phosphatases and associated proteins [BR:
bta01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
513602 (HDAC6)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
513602 (HDAC6)
Membrane trafficking [BR:
bta04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
513602 (HDAC6)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
513602 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
513602
NCBI-ProteinID:
NP_001092430
BGD-bta:
BT23879
Ensembl:
ENSBTAG00000013244
VGNC:
50613
UniProt:
A5PJZ7
LinkDB
All DBs
Position
X:86915161..86934092
Genome browser
AA seq
1129 aa
AA seq
DB search
MTSTGQDSTTPKERRSRHNPHSPTHDSSITSKRGVKKSAILRSSPSLAEVKKKGRMKKLS
QTAEQDLIMGLQGLNLNLESRTLSGTGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEEELHVLADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQG
QGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAEGKLILSLEGGYNLHSLAEGVSATLHTLLGDPCPVLESPGAPCPSA
QASLSCTLEALEPFWESLVRSVESLEEKDTVEKDDVEEKEEERLPQSPELSVPIWPVLQA
RTGLVYDQQMMDHHNLWDNYHPEMPQRIHFIMHHLDELGLAKRCHSLPARPATDAELLTC
HSAEHLERLRATEKMKTRELRREGANYDSIYICSSTFACAQLAAGAACRLVEAVLAGEVL
NGVAVVRPPGHHAEPDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQHI
FEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGPRMGDADYLAAW
HRLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMGLANGHIILILE
GGYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQASITKTIQVHRRYWRSLRVMKR
KNKEELSSSKLITKKPSQPASPGLANVTTTVEGNILETGMGQAASEASVKESTPDQTESA
TAPVELTQGQSSDTATQGAALDQTISEGATGGAELIQNPPASCINNRIPPALPVQGATAQ
TSPSKLMANLRILDLDSTTQEPSEEEGLLGEAAGGQDTNESVPVQVFGDHADTDEVMFYA
VRPLLWCPHLAAVCPIPETGLNVTQPCQYCGTLQENWVCLSCYQVYCGRYINAHMLQHHE
GSGHPLVLSYADLSAWCYHCQAYVHHKDLLAVKNIAHQNKFGEDIPHSD
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggtcaggattccaccacacccaaggagcgaaggagtaggcacaatccc
cactctcccacccacgactccagcatcacctcgaagcgaggtgttaaaaagagtgccata
ctccgctccagccccagtctagcggaggtaaagaagaaaggcagaatgaagaagcttagc
caaacagccgagcaagacctaatcatggggctacaagggctgaatctgaacctggagtcc
aggacactgtctggcactggcttggtgttcgatgaacagctaaatgaattccactgcctc
tgggatgacagcttcccggaacgcccagagcggctccatgccatcaaggagcaactgatc
caggagggcctcctggaccgctgcgtgtcctttcaggcccgattcgctgaaaaggaggag
ctgatgttggttcacagcctagaatatattgatctgatggaaacgacccagtacatgaac
gaggaggagctccacgtcctagcagatacctatgactcagtttatctgcatccgaactca
tacacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcagtcctggag
gctgagatccggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt
ctcatggatggatattgcatgttcaaccacgtggccgtggctgcccgttacgctcaacag
aagcatgatattcagagggtccttattgtggattgggatgtgcaccatggtcagggaata
cagttcgcctttgaccaagatcctagtgtcctctatttctccatccaccgctatgagcag
ggtcggttctggccccatcttaaggcctctaattggtccaccacaggtttaggccaaggc
cagggatacaccatcaatgtgccttggaaccaggtggggatgcaagatgctgactacatc
gccgctttccttcacgtcctcctgccagtcgcatttgagttccagccccagctggtcctg
gtagctgctggatttgatgccctccaaggggaccccaagggtgagatggccgccactcca
gcagggttcgcccagctcacccatctgctcatgggtctggcagaaggcaagctgatcctc
tcactggagggtggctataatctccactctctggctgaaggtgtcagcgccaccctccac
acccttctgggtgacccttgtcctgtgttagagtctcctggtgccccctgcccaagtgcc
caggcatcactctcctgtactctggaagccctggaacccttctgggagagccttgtgaga
tcagttgagagcctggaagaaaaggacactgtggagaaggatgatgtggaagagaaggag
gaagagagactgccacagtcccctgagctctccgttccgatatggccagtgctgcaggct
cgcacggggttggtctatgaccagcagatgatggaccaccacaacttgtgggataactac
caccctgagatgccccagcggatccactttatcatgcatcacctggatgaactgggcctt
gccaagcgctgccactccctacccgcaaggcccgctacagatgctgagctgctcacctgc
cacagtgctgagcacttggaacgtctacgggccacggagaagatgaagacccgggagctg
cgccgcgagggtgccaactatgactccatctacatctgctccagcacttttgcctgcgca
cagctggctgcaggcgccgcctgtcgcctggtggaggcagtactggcaggagaggtttta
aatggtgttgctgtagtgcgacctcctggccaccatgcagagccggatgcagcttgtggt
ttctgtttttttaattctgtggctgtggctgctcgccatgcccaggccatcagtgggcat
gctctgcggatcctgatcgtggactgggacatccatcatggtaatggaactcagcacata
tttgaggaggaccccagtgtgctgtacatttccctgcaccgctatgatcatggtaccttc
tttcccatggggaacgagggtgcctgtacccggataggtaaagctacaggcacaggattc
actgtcaatgtggcctggaatggaccccgcatgggtgatgctgactacctggctgcctgg
caccgtctggtgcttcctgttgcttacgagtttaacccagaactcgtgctggtctcagct
ggcttcgacgctgctcggggggatcctctgggcggctgccaggtgtcgcctgagggctat
gcccacctcacccaccagctgatgggcttggccaatggccatatcatcctaatcctagag
ggtggttataacctgacgtccatctcagagtccatggctgcctgcactcgctcccttctt
ggggatccactgcccctgctcacccggctgcggcccccactatctggagcccaggcttct
atcactaaaaccatccaagtccatcgaagatactggcgcagtttgcgggtcatgaagcgc
aaaaacaaagaggaactctccagttctaagttgatcaccaagaagccatcccaaccagcc
agtcctgggttagccaatgtgacgaccacagtggaagggaacatcctggagacaggcatg
ggacaggccgcctcagaagcatctgtgaaagagtccactccagatcagactgagtcagcg
acagctccagtagaacttactcagggccagtcctcagacacagccacacaaggagctgca
ctggaccagaccatctcagagggggccacagggggagctgaactgatccaaaaccctcca
gcctcatgcatcaacaacaggattcctcctgccttacccgtgcaaggagccacagcccag
acatcccctagtaagctgatggcaaacctcagaatactggacctagatagcacgactcag
gagccctcagaagaggaaggactactaggagaggcagctggaggtcaggacacaaatgag
tcagtgccagtgcaggtctttggagatcatgctgacactgacgaggtcatgttttatgcc
gtgagaccactgctttggtgtcctcatttggcggcagtatgccccatacctgagacaggg
ctgaatgtgacccaaccttgtcagtactgtggaacactccaggagaactgggtgtgtctg
tcttgctatcaggtctactgcggtcgttacatcaacgctcatatgctccagcaccatgaa
ggttcaggacacccactagtactcagctatgccgacctgtctgcctggtgttaccactgt
caggcctatgtccaccacaaggatctcctagcagtgaagaacatcgcccaccagaacaag
tttggggaagacataccccattcagactaa
DBGET
integrated database retrieval system
