Bos taurus (cow): 514177
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Entry
514177 CDS
T01008
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bta03037
]
514177 (IFT88)
Cilium and associated proteins [BR:
bta03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
514177 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_19
TPR_6
TPR_14
TPR_16
ANAPC3
TPR_10
TPR_11
TPR_CcmH_CycH
ARM_TT21_4th
ARM_TT21_5th
TPR_21
TPR-S
RPN7
TPR_15
HEAT_Nup120
ARM_TT21_C
HAT_PRP39_C
ARM_TT21_2nd
DUF6584
Motif
Other DBs
NCBI-GeneID:
514177
NCBI-ProteinID:
NP_001104256
BGD-bta:
BT22776
Ensembl:
ENSBTAG00000014286
VGNC:
30074
UniProt:
E1BLX1
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All DBs
Position
12:complement(35853118..35914399)
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AA seq
825 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTYDTEELENDTAFQQAVRTSHGRRPPITAKIPSTA
VSRPVATGYGSKTSLASSMGRPMTGAIQDGVTRPMTAVRAAGFTKGALRGSAFDPLGQSW
GPAPPLEARNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTRPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAISSFEHIMS
MAPNLKAGFNLILSYFAIGDREKMKKSFQKLIAVPLEIDEDDKYISPSDDPHTNLVIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEALD
CFLKLHAILRNSAQVLYQIANVYELMEDPSQAMEWLMQLISVVPTDSRALSKLGGLYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEIREQRIKSGRDSSGCPRGRRDGSAGSDSGQNCSAGSKGERLSAQLRALPGTDEPYESS
SNKEPDAFYVDPLGPQIERPKTAAKKRMEEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtacacctggccccagaaacagatgaagatgatctttattctggctat
aatgactacaatccaacctatgataccgaggaattggagaatgacacagcctttcagcaa
gctgtgagaactagtcatggcagaagacctccaataactgctaaaataccaagcacagca
gtttctagacctgtagctactggatatgggtccaagacctccctggcgtcgtcaatggga
agaccgatgacaggggctattcaggatggagttactagacccatgacagcagtgagagcc
gctggctttaccaagggagctttgagaggctctgcgtttgaccctcttggacagtcgtgg
ggcccggcaccacccctggaggccaggaatgaagacagtccagaagaaaagatcagacaa
ttagagaagaaagtaaatgagttggtagaagaaagctgtattgctaacagttgtggagac
ttaaaattggccttggaaaaggcaaaagatgcaggcagaaaggagagagtcctggtgagg
caacgagaacaagttacaaggccagagaacatcaacttggatttaacttactcagttctt
ttcaacttggccagtcagtattcagctaatgagatgtatgctgaagcactaaacacatat
caagttatagtgaaaaataagatgtttagcaatgcaggacggttgaaagtgaatatggga
aatatttatttaaagcaaagaaattattccaaagccattaaattctaccgaatggcctta
gatcaaattccaagtgtccataaagaaatgaggattaaaattatgcagaacattggagtc
acatttattaaaactgggcagtattcagacgccatctcttcttttgagcacatcatgagt
atggctccgaatctgaaggcaggcttcaatctgattcttagttactttgccattggagat
cgagaaaaaatgaagaagtcattccaaaaactgattgctgttccactagaaattgatgaa
gatgataaatacatttcgccaagtgatgacccacatactaatttagtgattgaagctata
aaaaatgatcatctgagacaaatggaacgtgaaagaaaagccatggcagaaaaatatatc
atgacagctgcaaaactcattgctcctgttattgaaacatcctttgctgtaggttatgac
tggtgtgttgaagttgtgaaagcctctcagtatgtagagctggcaaatgatctggaaata
aacaaagcaattacatacctgagacaaaaggactttaatcaggctgtggagaccttaaaa
atgtttgaaaaaaaggacagtagagtgaagagtgcagctgcgaccaacctctctttcctg
tattacttggaaaatgaatttgcacaagccagtagctatgcagatttagctgtgaactct
gacagatataatccgtcggctcttactaataaagggaatacagtctttgcaaatggagac
tatgagaaggcagccgagttctataaagaggctctaagaaatgactgttcttgcactgaa
gcgctttataacattggccttacctataagaagctaaaccggcttgatgaagctttggac
tgtttcctgaaacttcatgcaatcctaagaaatagcgcccaagtcctttaccagatagca
aatgtatacgagttaatggaagatcccagtcaagctatggaatggttgatgcagctgatc
agcgttgttcccactgactccagggccctgtctaaactgggagggctgtatgacagcgag
ggggataagtcgcaagcattccagtactactacgagtcgtataggtatttcccgtccaac
attgaggtcatcgagtggctcggggcctattacattgacacccagttttgtgaaaaagcc
attcagtactttgaaagagcttctcttatacagcctacacaagtgaaatggcagctgatg
gtagctagttgttttagaagaagtggtaactaccagaaagcattagacacttataaagat
attcacagaaaatttccagaaaatgtagaatgtctacgtttcttggtccgtctctgcaca
gacattggattgaaagaagttcaagaatatgcaacaaaactaaagagattggaaaaaatg
aaagaaatcagagaacagcgcatcaaatctggccgggacagcagcgggtgtccccgcggc
cggagagacgggagtgcgggcagtgacagtggccagaactgtagtgctggcagcaaaggc
gagcgactgagtgcccagcttcgagcactgcctggcacagacgagccttatgagagcagc
agcaacaaggagccagacgccttctatgtggatccgcttggccctcaaatagaaagaccc
aaaactgcagccaaaaagagaatggaagaggatgattttgctgatgaagagttaggagat
gatttgcttccagaatag
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