Bos taurus (cow): 514842
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Entry
514842 CDS
T01008
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
bta
Bos taurus (cow)
Pathway
bta03030
DNA replication
bta03410
Base excision repair
bta03420
Nucleotide excision repair
bta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
514842 (RFC1)
03410 Base excision repair
514842 (RFC1)
03420 Nucleotide excision repair
514842 (RFC1)
03430 Mismatch repair
514842 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bta03032
]
514842 (RFC1)
03400 DNA repair and recombination proteins [BR:
bta03400
]
514842 (RFC1)
DNA replication proteins [BR:
bta03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
514842 (RFC1)
DNA repair and recombination proteins [BR:
bta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
514842 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
RuvB_N
AAA_14
AAA_5
AAA_17
Rad17
AAA_7
AAA_30
AAA_18
AAA_16
nSTAND3
AAA_33
RNA_helicase
AAA_19
NTPase_1
NPHP3_N
Nexin_C
Motif
Other DBs
NCBI-GeneID:
514842
NCBI-ProteinID:
XP_024849308
Ensembl:
ENSBTAG00000014515
VGNC:
106894
LinkDB
All DBs
Position
6:complement(58430057..58507255)
Genome browser
AA seq
1144 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETVKKNEKTKSAEESLKAKKGIKEIKVNSSCKEDEFKPKQSN
KKKRIIYDSDSESEETVQVKNAKKRPEKLPRSSKLAKIQQQDPVTYISETDEDDDFVCKK
TASKLKENGGSTNSYLGASNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSIQRSDKK
MVASRRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKAKK
AEKDAEERETFSSVQVNLCKAEKPKYPHKEQFSDERKNFSPKKQTKCEGSRQSQQRSRSS
AHKTGETSPKASSKLALLKKKEESSNKETESMASKRKENVIELKETRTPKKMKSSPAKKE
SVSPDEAEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIERDE
AKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRTMPGK
KSKYEIAAEAEMKKEKSKLERTPQKNDQGKRKSSPTKKESESKKCKLTPKRESSIKSLKK
EASVSQRGLDFKEQAAEETNGDSRARNLADDSRESKVESLLWVDKYKPTSLKTIIGQQGD
QSCANKLLRWLQNWHKSPSEDKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTASLV
CQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKGFYSSGTVHSVGTRHALIMDEVDG
MAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAM
MSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLNMWCARNKALTYDQAKADSHRAKKDI
KLGPFDVARKVFVSGEETAHMSLMDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDMKKH
LMLLSRAADSICDGDLVDRQIRNKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSWLG
KYSSMGKHDRTVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLASQGIEGVQDVVAL
MDAYYLMKDDFENIMEISSWGGRPSPFSKLDPKVKAAFTRAYNKEVHLTPYSLQAVKTHR
HSTGPSLDSEYNEELNEDDSQSDEKDQDTLETDAMIKKKTKSSKPSKSEKDKESRKGKGK
SSKK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgaaaattctttggggttataccaagtggaaagaaacttgtaagtgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaagtttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgaattcaagccgaagcagtcaaac
aagaaaaagaggatcatctatgattcggattcagaatcagaggaaacagtacaggtaaaa
aatgccaaaaagcgaccggaaaaattgccacggtcttctaaacttgctaaaatccaacag
caggatcctgttacctacatttcagaaacagatgaagatgatgactttgtgtgtaagaag
acagcctctaaattaaaagaaaatggaggatctacaaatagttatcttggagcatcaaac
atgaaaaagaatgaggaaaacactaagaccaagaataagcctttgtcaccaataaaactt
acccccacatcagtgcttgattattttggaactggaagcatccaaagatcagataagaag
atggtggcaagcagaagaaaagagccttcacaaaatgcagatgattccagattaaatgat
gaagccatcgccaagcaattacaacttgatgaagatgcagagctggagagacaactgcat
gaagatgaagagtttgccagaacgttggccatgttggatgaagaacccaaggccaaaaag
gctgaaaaggatgcagaagaaagagagacattttcatctgtacaagtcaatttatgtaaa
gcagagaaacctaaatatcctcataaagaacaattttcagatgaaagaaagaacttcagc
cctaagaagcaaactaagtgtgaaggttcaagacaatcccagcaacgttccaggtcatca
gctcataaaacaggagaaacttctccaaaagccagttctaagctggcacttttgaaaaaa
aaagaagagagttctaataaagaaacagagtctatggcctcaaaaagaaaagaaaatgtt
attgagttaaaagagacaagaactcctaagaaaatgaaaagttctccagctaaaaaagag
tctgtaagtcctgatgaggctgaaaagagacgcactaattatcaagcttaccgaagctac
ttaaatcgagaaggtcccaaagctctgggctccaaagaaataccaaagggagctgaaaat
tgcttggaaggccttacgtttgtaatcacaggagtgctggagtccattgaacgagatgag
gccaagtctctaattgagcgttatgggggaaaagtgacaggaaatgtcagcaagaaaacc
aactacctggtcatgggtcgtgacagtggccagtccaagagtgacaaggcagcagccttg
ggaacaaatattattgatgaagatggcctgttgaatctgattcgaactatgccaggcaag
aagtccaagtatgaaatagccgctgaagctgagatgaagaaagaaaaatccaaattggaa
agaacaccccaaaaaaatgatcaaggaaaaagaaaaagtagtccaactaagaaggaatca
gaatctaaaaagtgcaaactgactcccaaaagggaaagctctataaagtcactaaaaaag
gaagcaagtgtgtctcagagaggcctggacttcaaggagcaggcggctgaggagacaaat
ggtgacagccgggctaggaatttggctgatgacagcagagaaagcaaagtggaaagtttg
ctctgggtggataagtataagccaacctcgctcaagaccataattggacagcaaggtgac
cagagctgcgccaacaaactcctgcgctggctccaaaactggcacaagagtccatccgaa
gataagaaacacgcggcaaaatttggtaaatttgctggcaaagatgatggctccagtttt
aaagcggcattgctctcaggtcctcctggtgttggcaaaacaaccacagcttctctggtt
tgtcaggaattgggatatagctatgtggaactgaatgcaagtgacactcggagtaagaac
agtttgaaggagattgttgctgagtcgctgaataataccagcatcaaaggcttttattca
agtggaacagtccattcagtaggcacgaggcatgctctcatcatggatgaagtagatggc
atggctggcaatgaggacaggggaggaattcaggaattaattggcctgataaaacataca
aaaattcccattatttgtatgtgcaatgatagaaatcatcccaagattcgctctttggtt
cattattgttttgatcttcgttttcaaagacctcgggttgaacagattaagggtgctatg
atgtctattgcatttaaagagggtctaaagatcccccctccagctatgaatgaaataatt
ttgggagctaatcaagatatcagacaggttttacacaatctgaatatgtggtgtgcacgg
aataaggcactaacctatgaccaggccaaggctgattctcatagagccaaaaaggacatc
aaactgggcccgtttgatgttgcccggaaagtgtttgtaagtggagaggagactgctcat
atgtcacttatggacaaatcagacctcttcttccatgattattcaatagcacccctcttt
gtccaggagaactacatacacgtgaagcccgtggctgcagggggtgacatgaaaaagcac
ttgatgcttttaagcagagcagcagacagcatatgtgatggtgacctagtggaccgtcaa
atccggaataagcaaaactggagtcttctgcccacacaggccatttatgccagtgttctt
cctggagagttaatgagggggtacatgacccagtttcctaccttcccaagttggttgggg
aagtactcatctatgggcaaacacgatcgtactgttcaggacctggctttgcatatgagt
ctcagaacttactccagcaaaaggacagtaaacatggattatctgtcacatataagagat
gcacttgtacagcccttggcctcacaagggatagaaggagtacaggatgttgttgctctt
atggacgcatattatttgatgaaagatgacttcgagaatattatggaaattagcagctgg
ggaggcagacctagtccgttctctaaactggatcccaaggtgaaagcagccttcacaaga
gcttacaataaagaagtccacctcactccgtattcactccaggcagtaaagacacacaga
cacagcacaggcccatctctggattctgaatacaatgaagagttaaatgaagatgactct
cagtccgatgagaaagaccaggacactttggaaactgacgctatgatcaagaaaaagaca
aaatcttcaaagccttcaaaatcagaaaaagataaggagtccagaaaaggaaaaggaaaa
agttcaaagaaatga
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integrated database retrieval system
