KEGG   Bos taurus (cow): 516318
Entry
516318            CDS       T01008                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1
  KO
K21944  period circadian protein 1
Organism
bta  Bos taurus (cow)
Pathway
bta04710  Circadian rhythm
bta04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:bta00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    516318 (PER1)
   04713 Circadian entrainment
    516318 (PER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bta03400]
    516318 (PER1)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    516318 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS LisH_PAC1
Other DBs
NCBI-GeneID: 516318
NCBI-ProteinID: NP_001276701
BGD-bta: BT30211
Ensembl: ENSBTAG00000003889
VGNC: 32748
LinkDB
Position
19:complement(27778459..27793616)
AA seq 1284 aa
MSRSGPLEGAEGGGDPRPGEPFCPGGGPSPGPPEHRPCPGPSLADDTDANSNGSSGNESN
GPESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEPDN
PSTSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQAN
QEFYQQWSLEEGEPCAMDMSTYTLEELEHVTSEYTLRNQDTFSVAVSFLTGRIVYISEQA
GVLLRCKRDVFRGARFSELLAPQDVGVFYGSTTPSRLPTWGPGTSAGSGLKDFTQEKSVF
CRIRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKR
IFTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQ
PFDHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPVPSP
ALSLDSDIQELSEQIHRLLLQPVHSPSPTGLCGVGPVPSSGPLLSPGSSSDSNGGDAEGP
GPPAPVTFQQICKDVHLVKHQGQQLFIESRARPLPRPRVPATGTFKAKTLPCQSPDLEAA
PAPIQAPVALAAEDAERKEASSCSYQQINCLDSILRYLESCNLPSTAKRKCASSSSCTAS
SASDDDKQRAGPVSVGAKKDPSAVLPGEGATPLKEPVVGGGALSPLALANKAESVVSITS
QCSFSSTIVHVGDKKPPESDIIMMEDLPSLPPGPAPSPAPSPTVAPDPAPDAYRPVGLTK
AVLSLHTQKEEQAFLSRFRDFSRLRGLDSSSTAPSAPGERGCHHSLAIPGRRHHCRSKAK
RSRHHQTTRAEAPGYISQPSPVPPSAPWPPPPATPPFPAVVQPYPLPVFPPRGGSQPLPP
APTSVPPAAFPAPLVTPMVALVLPNYLFPTPSTYPYGAPQMPAEGPPTPASRSPSPSLPP
SPPHRSDSPLFNSRCSSPLQLNLLQLEEAPRGEGGAAAAGSGSSAGHPPPSEETAEPEAR
LAEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLASGLGSGSGSHEGGSTSASI
TRSSQSSHTSKYFGSIDSSEAEAGAAQARAEPGDQVIKYVLQDPIWLLMANADQRVMMTY
QVPSRDMASVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVMACVDC
GSSTQEPGHPDDPLFSEVDGLGLEPMEEGGGEGGGGGGEGEGSDEAQAQAGARVSSSQDL
AMEEEEQGGSSPSPALPATENGTS
NT seq 3855 nt   +upstreamnt  +downstreamnt
atgagcaggagcggccccctagaaggggctgaagggggaggggaccccaggccaggggaa
cccttttgtcctggagggggtccatcccctgggcctccagagcaccgaccttgtcctggc
cccagcttggctgatgacacggatgccaacagcaatggctctagcggcaatgagtccaat
ggacccgagtccaggggtgcatctcagcggagttcgcacagctcctcctccggcaatggc
aaggactcagctctgctggagaccactgagagcagcaagagcacgaactctcagagccca
tccccacccagcagttctattgcctatagcctcctgagtgccagctctgagccagacaac
ccttctaccagtggctgcagcagtgaacagtcagctcgggcaaggactcagaaagaactc
atgacggcactgcgagagctcaagcttcggctgcccccggagcgcaggggcaagggccgc
tccgggactctggccacactgcagtacgcgctggcctgtgtcaagcaggtgcaagccaac
caggagttctaccagcaatggagcctggaggagggcgaaccgtgtgccatggacatgtcc
acctatactctggaggagctggagcacgtcacatctgagtacacactccgcaaccaggac
accttctccgtggctgtctccttcctgacaggccgcatcgtctacatttccgagcaggcg
ggtgtcctgctgcgctgcaagcgggacgtgttccggggtgcccgcttctctgagcttttg
gctccccaggacgtgggcgtcttctacggttccaccaccccatcccgcctgcccacctgg
ggcccagggacctctgcaggttcaggcctcaaggacttcacccaggagaagtctgtcttc
tgtcgtatcagagggggtcctgaccgggatccggggcctcggtaccagccattccgccta
accccatatgtgaccaagatccgggtctccgacggggcccctgcccagccatgctgcctg
ctcatcgcagagcgcattcactctggttatgaagctccccggatcccccctgacaagagg
atcttcaccacacgacacacgcccagctgcctcttccaggatgtggatgagagggctgcc
ccgctgctaggctacctcccccaggacctcctgggggccccagtgctcctcttcctgcat
ccggaggaccgacccctcatgctggccattcacaagaagatcctgcagctggccggccag
ccctttgaccactcccctattcgcttctgtgcccgtaatggggagtacgtcaccatggac
accagctgggctggtttcgtgcacccctggagccgcaaggtggcctttgtgttgggccgc
cacaaagtacgcacggcgcccctgaatgaagatgtattcactcccccggtccccagccct
gctctgtccctggactctgacatccaagagctctcagagcagatccaccggctgctgtta
cagcctgtgcacagccccagccccacgggcctctgtggagtaggccccgtgccttcctct
ggccctctcctcagccctggctcctccagtgacagcaatgggggtgatgccgagggacct
gggcctcctgccccggtgaccttccagcagatctgtaaggatgtgcacctggtgaagcat
caggggcagcagctttttattgagtcccgggcccggcctctgccccggccccgtgtccct
gctactggcacattcaaggccaagacccttccctgccaatccccagacctggaggcggcc
ccggctccaatccaggccccagtggccttggccgctgaggatgctgagcggaaagaagcc
tccagttgctcctaccagcagatcaactgcctggacagcatcctcaggtacctggagagc
tgcaacctccccagcaccgcaaagcgcaaatgtgcgtcctcctcttcctgcactgcctct
tcggcctccgacgacgacaagcagcgggcaggcccagtctctgtgggcgccaagaaagat
ccatcagcagtgctgcctggggagggggccacccctctgaaggagccggtggtgggagga
ggagccctgagcccactcgccctggccaataaggcggagagcgtggtgtccatcaccagt
cagtgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggagtcggac
atcatcatgatggaggacctgcccagcctgcctcctggtccagctcccagcccagcccct
agtcctacggtagcccctgacccagccccagacgcctaccgcccagtgggcctgaccaag
gccgtgctgtccctgcacacacagaaggaggagcaggccttcctcagccgcttccgtgac
ttcagcaggctgcgtggactggacagctcctccacagccccctcggcccctggcgagcga
ggctgccaccacagccttgccatccccggccgccgccaccactgccgatccaaagccaag
cgctcacgtcaccaccagacaactcgggccgaagcccccggctacatctcccagccctcg
cctgtgccaccctctgccccctggcccccgccaccagccactcctcccttcccagctgtg
gtccagccatacccactccccgtgttccccccgagaggtggctctcagcctctccctcct
gctcccacgtctgtgcctcctgcagctttccctgcccccctggtgacccccatggtggcc
ttggtgctccctaactatctgttccctaccccatccacctacccctacggggcaccccag
atgcctgctgaggggcctcctacccctgcctcccgctccccgtctccgtccctgcccccg
agccctccccaccgctccgactctccgctcttcaactcaagatgcagctccccactccag
ctaaacctgctgcagcttgaggaggcccctcgaggtgaggggggtgcagcggcagcgggc
tctgggagcagtgctgggcacccccctcccagcgaggagacggcagaaccagaggccaga
ctggcggaggtaactgagtcctccaaccaggatgctctctcgggctccagtgacctgctg
gagttgctgctacaagaggactctcgatcaggcacgggctctgctgcctcaggctccttg
gcctccggcttgggctctggttcaggctcccatgaggggggcagcacttccgccagcatc
acgcgcagcagtcagagcagccacacgagcaagtactttggcagcatcgattcttcagag
gctgaggctggggctgcccaggccagggctgagcctggggaccaggtcattaagtatgtg
ctccaggatcccatctggctgctcatggccaatgctgaccagcgtgtcatgatgacttat
caggtgccctccagggacatggcctctgtgctgaagcaggaccgggagcggctccgggcc
atgcagaagcagcagcctcggttctcggaggaccagcggagggaactgggtgctgtgcac
tcctgggtccggaaaggtcaactgcctcgggcccttgatgtgatggcctgtgtggactgc
ggtagcagcacccaagagcctggccatcctgatgaccctctcttctcggaagtggatgga
ctggggctggagcccatggaggagggcggaggcgagggtggtggcggtggtggtgagggt
gagggcagcgatgaggcccaggcccaagctggggccagggtctcgagctctcaggacctg
gccatggaagaggaggagcaaggtgggagctcacccagtccagccttacctgccacagaa
aatggcaccagctag

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