KEGG   Bos taurus (cow): 517354
Entry
517354            CDS       T01008                                 
Symbol
CX3CL1
Name
(RefSeq) fractalkine isoform X1
  KO
K05508  C-X3-C motif chemokine 1
Organism
bta  Bos taurus (cow)
Pathway
bta04060  Cytokine-cytokine receptor interaction
bta04061  Viral protein interaction with cytokine and cytokine receptor
bta04062  Chemokine signaling pathway
bta04148  Efferocytosis
bta04668  TNF signaling pathway
bta05163  Human cytomegalovirus infection
Brite
KEGG Orthology (KO) [BR:bta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    517354 (CX3CL1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    517354 (CX3CL1)
   04061 Viral protein interaction with cytokine and cytokine receptor
    517354 (CX3CL1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    517354 (CX3CL1)
 09150 Organismal Systems
  09151 Immune system
   04062 Chemokine signaling pathway
    517354 (CX3CL1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    517354 (CX3CL1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:bta04052]
    517354 (CX3CL1)
Cytokines and neuropeptides [BR:bta04052]
 Cytokines
  Chemokines
   517354 (CX3CL1)
SSDB
Motif
Pfam: IL8 CXCL16
Other DBs
NCBI-GeneID: 517354
NCBI-ProteinID: XP_002694931
BGD-bta: BT10766
Ensembl: ENSBTAG00000024869
VGNC: 52190
UniProt: A0ABI0P2N0
LinkDB
Position
18:25383170..25395289
AA seq 458 aa
MGLPPLSRPLCLAVLCHLVALLAGQQHGVNKCNLFCNKMTQKIPESRLVGYQRNRESCND
GAVILKTVKGKSFCADPKEEWVQKAMKHLDHKASVSQKSGTFERQTSEGKPRTTLGAREM
YRSAASEVNFTGESSSLGAESALGTSPGVAGSMGTRSSSTSKAPDGGTQKIELFNEAAFT
TATSWQSSAADQPEAGLWTEGKASEATSTLVPSTQTLPTPVPSTQAPSTQTLPTPVPSTQ
TLPTPVPSTQAPSTQASSTQTLPTKTLSTQTLPSLVPSTPDPSTQAPTLSYAVLEDSSGP
GSLTVGIKVQDSSKNSLGSKEMSPSSAHTDAFLGSATVSSIFEVTVASEGTPSMDALASG
SWGPETEELPKAKEPILTTAGPRSLGILMTSVPDSQVATRRQAVGLLAFLGLLFCLGVAM
FAYQRLQSCPHKMVGDVVEGICYVPRSCGSNSYVLVPV
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgggtcttccgcctctctcgcggccgctctgcttggctgtcctctgccatttggttgcg
ctgctagccgggcagcaacacggtgtgaacaagtgtaacctcttctgcaacaaaatgacc
cagaagattcccgagtctcgtctagtcggctaccaacgaaatcgggagtcctgcaatgat
ggagctgtcatcctgaagactgtgaagggtaaatcattctgtgctgacccaaaggaggaa
tgggtccagaaagccatgaagcacctagaccacaaggcttctgtgtctcaaaagagtggc
acatttgagaggcaaaccagtgagggcaagcccaggaccaccctgggcgccagggagatg
taccggtctgctgcctcagaggtgaacttcacgggcgaaagcagtagtctgggggcagag
agtgccttggggacttcgccaggagtggctggttccatggggaccaggtcctcctccact
tcaaaagctccagatggagggactcagaaaattgagcttttcaacgaggctgccttcacc
accgccacgtcttggcagagttctgctgccgaccaacctgaggcaggcctctggactgag
gggaaagcctctgaggccacctccaccctggtcccctccacccagaccctccccacccca
gtcccctccacccaggccccctccacccagaccctccccaccccagtcccctccacccag
actctccccaccccagtcccctccacccaggccccctccacccaggcctcctccacccag
accctccccaccaagaccctctccacccagaccctcccctccctggtcccctccaccccg
gacccctccacccaggccccgactctttcctacgctgtcttagaggacagcagtgggcct
ggaagcctaactgtgggaatcaaggtacaggactcttcaaagaactctctagggtccaaa
gaaatgagtccctcttcagctcacacggatgccttcctggggtcggccacggtgtccagc
atcttcgaggtcactgtagcctctgaagggacccccagcatggatgcactggcctcgggc
agctggggccctgagactgaggagctccccaaggccaaggaacccattctcaccaccgca
ggcccccggagtctgggcatccttatgacgtctgtccccgactcccaggtggccacgcga
aggcaggccgtagggctgttggccttcctcggtctcctcttctgcctgggggtggccatg
tttgcctaccagagactgcagagctgccctcacaagatggtgggggatgtggtggaaggg
atctgctatgtcccccggagctgtggcagtaactcgtacgtcctggtgccagtgtga

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