Bos taurus (cow): 518857
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Entry
518857 CDS
T01008
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
bta
Bos taurus (cow)
Pathway
bta03420
Nucleotide excision repair
bta04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
518857 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
518857 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bta04121
]
518857 (ERCC8)
03400 DNA repair and recombination proteins [BR:
bta03400
]
518857 (ERCC8)
Ubiquitin system [BR:
bta04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
518857 (ERCC8)
DNA repair and recombination proteins [BR:
bta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
518857 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WDR55
WD_LRWD1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
518857
NCBI-ProteinID:
NP_001103651
Ensembl:
ENSBTAG00000021606
VGNC:
28574
UniProt:
Q5BIM8
LinkDB
All DBs
Position
20:18371119..18422105
Genome browser
AA seq
397 aa
AA seq
DB search
MLGFLSARQAGLEDPLRLRRAESTRRVLGLELNKDRDVERIHCSGVNTLDIEPVEGRYML
SGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQIADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRYEYILATASADSRAKLWDVRRASGCLITLDQHNGKKSQAAESA
NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVYNDSRKGLKFTVS
SGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQSNFQELYSGSRDCNILA
WVPSLCESVPDDDDETSTRSQLNPAFEDAWSSSDEEG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgctagggtttttgtcggctcgacaagcgggtttagaagaccctcttcgcctccggaga
gcagagtccacacggagggttttgggactggagttaaacaaagacagagatgttgaaagg
atccattgcagtggagttaacacccttgacattgaacctgttgaagggagatacatgtta
tcaggtggttcagatggtgtgattgtgctttatgatcttgagaactccagcagacaacct
tattacacgtgtaaagcagtgtgttccgttggcagaagccaccctgatgttcacaaatac
agtgtggagaccgtacagtggtatcctcatgacactggcatgttcacatcaagttcattt
gataagactctgaaagtatgggatacaaatacattacaaattgctgatgtatttaatttt
gaagaaacagtttatagtcatcatatgtctccggttgccaccaagcactgtttggtagca
gttggtactagaggacccaaagtacaactttgtgacttgaagtctggatcctgttcccac
attctacagggtcacagacaagaaatattggcagtttcctggtcaccacgttatgaatat
atcttggcaactgcaagtgctgacagtagagcaaaattatgggatgtgaggagagcatca
ggatgtttgataactcttgatcagcataatgggaaaaagtcgcaagcagctgaatcagca
aacactgctcataatggaaaggttaacggcttatgttttacaagtgatggtcttcatcta
ctcactgttggcacagataatcgaatgaggctctggaatagttccaatggagaaaataca
ctggtcaactatggaaaagtatataatgatagtagaaaaggattgaaattcactgtctcc
tctggctgcagttcagaatttgtttttgtaccatatggtagcaccattgctgtttataca
atttactctggagaacagataactatgcttaagggacactataaaagtgttgactgctgt
gtatttcagtctaatttccaggaactttacagtggtagcagagactgcaatattcttgct
tgggtaccatccttatgtgaatcagttcctgatgatgatgatgagacttcaaccagatca
cagttaaatccagcatttgaagatgcctggagcagcagtgatgaggaaggatga
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integrated database retrieval system
