Bos taurus (cow): 519439
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Entry
519439 CDS
T01008
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
519439 (SOX18)
Transcription factors [BR:
bta03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
519439 (SOX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
MlaC
Motif
Other DBs
NCBI-GeneID:
519439
NCBI-ProteinID:
NP_001069257
Ensembl:
ENSBTAG00000011662
VGNC:
35145
UniProt:
Q0VC26
A0ACM8QAG0
LinkDB
All DBs
Position
13:53823431..53825287
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AA seq
389 aa
AA seq
DB search
MQRSPLGYGAQDDPPARRDCAWAPGPGAAAEPRGLPAVPVVPTAPAAPASPPSPPRSPPR
SPEPGRYGLSPAGRGERQGTDESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLG
KAWKELSPAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKARRLEPGLLLPGLAPP
PPPPPPEPFPAATGPARVFRELPPLGAEFDGLGLPTPERSPLDGLEPGEAAFFPPPAAPE
DCSLRAFRAPYGPAELPRNPGGCFGAPPAEALRTAPGPAAPLCGLYYSAPGAPGPGPYPG
PLSPPPEAPPLESAEPLGPAADLWADVDLTEFDQYLNCSRTRPDAAGLPYHVALAKLAPR
TMSCPEESSLIAALSDASSAVYYSACISG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcgccgctcggctacggcgcacaggacgatccgcccgcccgccgcgactgt
gcatgggccccgggccccggggccgccgctgagccgcgcggcctccccgccgtccccgtc
gtccccaccgcgcccgccgcgcctgcctcgccgcctagtccgccgcgcagcccgcctcgc
agccccgagccggggcgctatggtcttagcccggccggccgtggggagcgccaggggacc
gacgagtcgcgcatccggcggcccatgaatgccttcatggtgtgggcgaaggacgagcgc
aagcggctggcgcagcagaacccagacctgcacaacgcggtgctaagcaagatgctgggc
aaggcgtggaaggagctgagcccggcggagaagcggcccttcgtggaggaggcggagcgg
ctgcgcgtgcagcacctgcgcgaccaccccaactacaagtaccggccgcgccgcaaaaag
caggcgcgcaaggcccggcggctggagcccggcctcctcctcccaggcttggcgccaccg
ccgccgccgccgcctcccgagccctttcccgcggctacgggcccggcccgggtcttccgc
gagctgccaccgttgggcgccgagttcgacggtctggggctgcccacaccggagcgctcg
ccgctggacggcctggaacccggcgaggccgccttcttccctccgcccgcggcgcccgag
gactgctctctgcgggccttccgtgcgccctacggcccagccgagctgcccaggaaccca
ggtggctgtttcggggcgccgccagccgaggcgcttaggacagcgcccggccccgccgca
ccgctttgcggcctctactacagcgccccgggcgcgccgggcccgggcccctaccccggc
cctctgtcgccgccacccgaagcccctcccctggagagcgccgagccgctgggacctgcc
gccgacctgtgggccgacgtggacctgaccgagttcgaccagtacctcaactgcagccgg
actcgccccgacgccgccgggctcccgtaccacgtggcgctggccaagctggccccacgc
accatgtcctgccccgaggagagcagcttgatcgccgcgctgtccgatgccagctctgct
gtctactacagcgcctgcatctcgggatag
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