Bos taurus (cow): 519526
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Entry
519526 CDS
T01008
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bta03009
]
519526 (LTN1)
04121 Ubiquitin system [BR:
bta04121
]
519526 (LTN1)
Enzymes [BR:
bta01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
519526 (LTN1)
Ribosome biogenesis [BR:
bta03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
519526 (LTN1)
Ubiquitin system [BR:
bta04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
519526 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LTN1_E3_ligase_6th
UBC_like
Ltn1_1st
LTN1_E3_ligase_5th
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
HipN
zf-RING-like
DUF7809
Motif
Other DBs
NCBI-GeneID:
519526
NCBI-ProteinID:
NP_001179438
BGD-bta:
BT13680
Ensembl:
ENSBTAG00000000201
VGNC:
31078
LinkDB
All DBs
Position
1:7183913..7242830
Genome browser
AA seq
1766 aa
AA seq
DB search
MGGKNKQRTKGNLRPSNSGRAAELLAKEQGTVPGFIGFGTFHSDLGYVPAIQGAEEIDSL
VDSDFRMVLRKLSKKDVTTKLKAMQEFGTMCTERDTEIVKGVLPYWPRIFCKISLDHDRR
VREATQQAFEKLILKVKKHLAPYLKSLMGYWLMAQCDTYTPAASAAKDAFEAAFPPSKQP
EAIAFCKDEITSVLQDHLIKETPDTLSDPQTVPEEERDAKFYRVVTCSLLALKKLLCLLP
DNELDSLEEKFKSLLSQNKFWKYGKHSIPQIRSAYFELVSALCQRIPQLMKDEASKVSPS
VLLSIDDSDPIVCPALWEAVLYTLTTVEDCWLHVNAKKSVFPKLSAVVREGGRGLATVIY
PYLLPFISKLPQSITDPKLDFFKNFLTSLVAGLSTEKTKTSFSECSAVISAFFECLRFIM
QQNLGEEEIEEMLVNDQLIPFIDAVLKDPKLQDGQLFNHLAETLSSWEARADLEKDDKTA
RNLEKVLLNFWEKLSEICVEKINEPEADVKSVLGVSNLLQVLQKPKSSLKLNKKKVGKVR
FADEMPENNKENEKCVSSEGENSEGSELMAEPSVSPSCSDLISPLRKKPLEDLVCKLAEM
SINYVNEQKSEQHLRFLSTLLNSFSSTQVFKVLLGDEKQSTVKGKPLEIAKLVQKNPAVQ
FLYQKITGWLNEDQRKDAGFLVDILYSALCCCDSNVERKAILDDLIEVELKWNSILQIIE
KACSSSDNHALVTPWLKGDILGEKLVTLAEHLCNKDLESTVSSEPYFSERWTLLSMVLSQ
HVKNDYLIGEVYVERIIVKLHETLSKAKKLSEAENNDSSVSFICDVAYNYFSSAKGCLLM
PSSEDLLLTLFQLCAESKEKTHLPDFIISKLKNTWLSGVNLLVHRTGDTFKQSTFLRLSA
LWLKNQVQSSTLDVTSLQVLLSAVDDLLNALLESKDANLLGTYIGSVMPDNSEWEKMRQS
LPVQWLHRPLLEGRLSLNYEGFKTDFKEQDTKKLPSHLCTSALLSKMIVVALKKETVLEN
NELDKIIAELLYSLQWYEELDNPPIFLTGFCEMLQKMNITYDNLRGLGNTSGLLQLLFDR
SRKNGTLWSLIIAKLILSRSVSSDEVKQHYRRKEGFFPLTEGNMHTIQSLCPFLSKEDKK
EFIAQCIPALLAWTKEDVCHINGGFGHLAIFNSCLQTKSIDDGELLHGLLKILITWKKDH
EDIFLFSCNLSEVSPEILAVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTNE
NQALYSVPLVQLFAYVSCDLACELSAFFDSTTLVTTGSLPVNLISEWKEFFSPGIHSLLL
PLLVTATGENRDTSETSFQNAMLKPMCETLTYIPKDQLLSQKLPARLIAGQKTNLPEYLQ
TLLNTLAPLLLYRARPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMS
LLSTQEDLLENVLGCIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYS
MYLRKTKSLNKLLYHLFRLMPENPAFAETAVELSNKDPRTFFTEELHLGIRDTSALPYHI
PHLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSSQEISSVQTSTQL
FNGMTVKARATTREVMATYSIEDIVIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWM
LQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKK
FHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggaagaacaagcagaggaccaaggggaatctgaggccttcaaacagtggccga
gctgcagaactccttgccaaggaacagggaacagtgcctggatttattggttttggaaca
tttcacagtgacctaggctatgttcctgctattcaaggagctgaagaaatagacagtctt
gtggattctgatttccgaatggtgctgcggaaactttctaagaaagatgtcacaacaaaa
ctaaaagctatgcaggaatttggaaccatgtgtacagaaagagacacagaaattgtaaaa
ggagttcttccatactggccaagaattttctgcaaaatttcacttgatcatgaccgccgg
gttcgagaagccacacagcaagcttttgaaaaacttatccttaaagtaaagaaacacttg
gctccttatttaaaaagtttaatgggttattggctgatggctcagtgtgatacttacaca
ccggctgcctctgcagcaaaagatgcctttgaagcagctttccctccgagcaagcaacct
gaagccatagcattttgtaaggatgaaatcacaagtgtgctacaggatcatcttatcaaa
gaaacacctgataccctcagtgacccacaaactgttccagaggaagagagagacgctaaa
ttctatcgagtcgtaacttgttccttattggcattaaagaaattgctttgcctgttacct
gataatgagcttgactctctggaggagaaatttaagtctcttttatcacagaataagttt
tggaagtatggaaaacatagtatacctcagatccgctcagcctattttgagttggtttct
gctttgtgccagcgtattccacagttgatgaaagatgaagcatccaaagtgagcccatct
gttcttcttagcatcgatgacagtgaccccattgtatgcccagctctctgggaagctgta
ctttatacacttacaactgtggaggactgttggcttcatgtaaatgcaaaaaaaagtgtg
tttcccaagctgtcagctgtggttcgtgaaggaggtcggggtctggctactgtcatatat
ccttatcttctgcccttcatcagcaaactccctcagtccattacagatccaaagttggat
ttcttcaagaattttctcacctccctagttgcagggctatcaacagaaaaaaccaaaacc
agcttttcagagtgctcagcagtgatatctgctttttttgaatgcttacgttttataatg
caacaaaacttaggggaggaagagatagaagagatgctcgtcaatgatcagttgattcct
tttattgatgcagttctcaaagacccaaagttgcaagatgggcagctatttaaccatttg
gcagaaactttaagttcctgggaagccagagccgatttggaaaaagatgataaaacagct
cgcaacttggagaaagtgctgctgaatttctgggaaaaactatcagagatctgtgttgag
aaaatcaatgagccagaagccgatgttaagtcagttttgggtgtttctaacctattgcag
gtccttcaaaagccgaagagctccttgaaattgaataaaaaaaaagttggtaaggttaga
tttgctgatgagatgcctgaaaataataaggagaatgagaaatgtgtctcctcagaggga
gagaacagtgaaggctctgagttaatggctgaaccttctgtctctccgagttgctccgac
cttatatccccgctgaggaaaaaacctttggaagacttagtctgtaaactggcagagatg
agcattaattatgtcaatgaacaaaagtcggagcaacatctcaggtttctttccaccctg
ctcaactcgttctcgtcaacccaagtgtttaaagtgctgctaggtgatgaaaaacagagc
actgtcaaaggcaagcctcttgaaatagccaaacttgtacaaaaaaatcccgcggtacaa
tttctataccagaaaataacaggttggctaaatgaagatcaaaggaaggatgccggtttc
ttggtggacattctgtacagtgccctctgttgctgtgatagtaatgtggaaagaaaagct
attctggatgatcttattgaggtagagctgaaatggaattctattcttcagatcattgaa
aaggcatgctctagttcagataatcatgctttagtaacaccttggctcaaaggagatatc
cttggagagaaattggtaaccttggcagagcatctttgtaacaaagacttggaatccaca
gtatcttctgaaccttacttctcagaaagatggactcttttaagcatggtgttatcccaa
catgttaaaaacgattacttgattggagaagtttatgttgaaagaattattgttaaactt
catgaaactttatccaaagcaaagaaattgtcagaagctgaaaataatgactcatcagtg
tcttttatctgtgatgtggcctataactatttcagctcagcgaaaggatgcttgctaatg
ccatcatctgaagatttattattaactctctttcagttatgtgctgagagcaaagaaaaa
acacatttgccagactttatcatcagtaaactgaaaaatacttggctctctggtgtgaat
ttattggttcatcgaactggtgacacatttaaacagagcaccttcctacgtttatctgct
ctgtggctgaagaaccaagttcagtcttcaactttggatgtcacaagtcttcaggtgctt
ttgtctgctgttgatgatttgctaaatgcgcttctagagagtaaagatgctaatctccta
ggaacttatattggaagcgtaatgccagacaacagtgaatgggaaaaaatgagacagtct
cttcccgtacagtggttgcataggcctcttttagaaggaagattgagtttgaattatgag
ggtttcaaaacagattttaaagagcaagatacaaagaaacttcccagccatttgtgtact
tcagcattattgagtaaaatgatagtagttgcactgaaaaaggaaacagtcctagaaaat
aatgaacttgacaaaataattgcagaactgctctattcattgcagtggtatgaagaatta
gacaatccacctattttcctaactggattttgtgaaatgcttcagaaaatgaatatcacg
tatgataacttacgtggacttggtaatacttccggccttctgcagctgttatttgacaga
tccaggaaaaacggcaccctttggtctcttattattgctaagttgatcctttcccgaagt
gtttcatctgatgaagtaaaacagcattataggagaaaagaaggtttttttccactaaca
gaaggcaatatgcatactattcaaagtctctgtccatttttgtcaaaagaagacaagaaa
gaattcattgctcagtgtatacctgcccttttggcctggaccaaggaagatgtttgccat
attaatggaggttttggacatcttgccattttcaattcttgtctgcagaccaaaagcata
gatgatggagagctattacatggtctattaaaaattctgataacatggaaaaaagatcac
gaagatatttttcttttcagttgtaatctgtcagaagtaagtccagagatactggctgta
aatatagaaataatccgtttcctttccctgtttctgaaatactgctcatctcctttggca
gagagcgaatgggacttcatcatgtgttccatgttggcttggttggagacaacaaatgag
aatcaggcactgtattctgttccacttgtacaactgtttgcctatgtcagctgtgatttg
gcctgtgaactcagcgcgttttttgattctacaactctggtcaccactggcagccttcct
gtaaatctgatcagtgaatggaaagaatttttttctcctggcatccacagtttgctttta
cctcttttggtgactgctacaggagaaaacagagatacatctgaaacatcatttcagaat
gcaatgctgaagcccatgtgtgaaacattaacttatatcccaaaggatcagctattgagt
cagaaactccctgcaagattgattgctggtcagaaaacaaacttgccagaatacctccag
actttgttaaatacattagccccattactcctttatagagctcggcctgtgcaaattgct
gtctatcatatgctatacaaattgatgcctgaactcccacaatatgatcaagataatcta
aagtcatatggagatgaagaagaagaaccagccttgtcgccaccggctgcactgatgtct
cttcttagcactcaagaggacttactagaaaatgttttgggatgtattcctgttggacag
atagttactatcaagccactgagtgaagacttctgttatgttctggggtacctcctcact
tggaaattaatacttactttcttcaaagctgcttcatctcagcttcgagctctgtattca
atgtaccttcgaaaaacaaaaagtttgaataaattgctttatcacctgttcaggcttatg
ccagaaaatccagcctttgcagagacagctgttgagctctccaataaggaccctcgaact
ttctttacagaagagctccatttgggtattagagatacctcagctcttccctaccatatt
ccacacttggcttgttcagtctatcacatgacattaaaagacttgccagccatggtcagg
ctgtggtggaacagtagtgagaagcgtgtgttcaatatcgtagatagattcaccagcaag
tatgttagcagtgttctttcttctcaagaaatatcttctgtgcaaacaagtacacagctc
tttaatggcatgacggttaaagctcgagctactactcgagaagtcatggccacttacagt
attgaggatatagtgattgaacttataatacagctgccttcaaattatccattgggctca
ataacagtggaaagtgggaaaagagttggagtggccgtgcagcagtggcgaaactggatg
cttcagctgagcacttacctcacccatcaaaatggaagtattatggaaggcttagcatta
tggaaaaataatgtagacaaacgttttgagggtgttgaagattgcatgatttgtttctca
gtcattcacggtttcaactattctcttcccaaaaaagcctgtagaacatgcaaaaaaaag
ttccattcagcttgtttgtacaaatggtttacatccagcaacaaatccacttgtccactc
tgtcgcgagacctttttctga
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integrated database retrieval system
