KEGG   Bos taurus (cow): 519896
Entry
519896            CDS       T01008                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
bta  Bos taurus (cow)
Pathway
bta04115  p53 signaling pathway
bta04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    519896 (COP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    519896 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bta04121]
    519896 (COP1)
Enzymes [BR:bta01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     519896 (COP1)
Ubiquitin system [BR:bta04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    519896 (COP1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     519896 (COP1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR3_2nd zf-C3HC4_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd zf-C3HC4 Beta-prop_TEP1_C zf-RING_2 Beta-prop_NOL10_N Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd zf-RING_UBOX Beta-prop_EML zf-C3HC4_3 Beta-prop_DCAF4 zf-RING_5 ASA1 DSE1_N Beta-prop_WDR90_POC16_2nd zf-C3HC4_4 Beta-prop_Aladin WD40_RFWD3 RING_XB3-XBAT31 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st zf-rbx1 zf-RING_10 PAC11 zf_C2H2_10 RING_ZNF598 zf-RING_11 Sina_RING C_GCAxxG_C_C
Other DBs
NCBI-GeneID: 519896
NCBI-ProteinID: NP_001096726
Ensembl: ENSBTAG00000031385
VGNC: 50041
UniProt: A2VE77 A0AAA9SMV9
LinkDB
Position
16
AA seq 735 aa
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALGSGGAAQAAGSGG
LGGPARPVLVAAAVSGSGGGSGGGAVSAGLSRLSCAARPSAGVGGSSSSLSSGSRKRPPL
APLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV
VDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLA
NVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV
EEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASR
RKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASD
LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCI
SWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDA
KVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFK
GHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIA
CGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVL
IAANSQGTIKVLELV
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgtctgggagccgccaggccggatcgggctccgccggcaccagcccgggctcctctgcg
gcctcctcggtgacttccgcctcctcgtccttatcctcttccccgtcgcccccttccgta
gcggcttcggcggcggcgctggggtccggcggggcggcccaggccgcgggctccggcggt
ctcgggggcccggcgcggcctgtgctggtggcggccgcggtgtccggcagcggcggcggg
agcggcggcggggcggtgtccgcgggcctgtcccggctcagctgcgcggccaggcccagc
gccggcgtaggagggagcagttccagcctaagcagcggcagcaggaagcgacctccgctc
gcccccttgtgcaacgggctcatcaactcctacgaggacaaaagcaacgacttcgtctgc
cccatctgctttgatatgatcgaggaagcatacatgacgaagtgtggtcacagcttttgc
tacaagtgtattcatcagagtttggaggataataatagatgtcccaagtgtaactatgtt
gtggataatattgaccatctgtatcctaatttcttggtgaatgagctcattctcaaacag
aagcaaagatttgaggaaaagaggttcaaattggaccactcagtgagtagcaccaatggc
cacaggtggcaaatatttcaggatttgttgggaactgaccaagataaccttgatttggcc
aatgtcaacctcatgctggagttactagtgcagaagaagaaacaactggaagcagaatca
catgcagcccaactacagatccttatggaattcctcaaggttgcaagaagaaataagaga
gagcaactggagcagattcagaaggagttaagtgttttggaagaggatatcaaaagagtg
gaagaaatgagcggcttatattctcctgtcagtgaggatagcacagtgcctcaatttgaa
gctccttctccatcacacagtagtattattgattccacagaatacagccaacctccaggt
ttcagtggcagttctcagacaaagaaacagccctggtataacagcacattagcatcaaga
cgaaaacgactcactgctcattttgaagacttagagcaatgttacttttctacaaggatg
tctcgtatctcagatgacagtcgaactgcaagccagttggatgaatttcaggaatgcttg
tccaagttcactcgatataattcagtacgacctttggctacattgtcatatgctagtgat
ctctataatggttccagcatagtttctagtattgaatttgaccgggattgtgactacttt
gcaattgctggagttacaaagaagatcaaagtctatgaatatggcacagtcattcaggat
gcggtggatattcattaccctgaaaatgaaatgacctgcaattccaaaatcagctgtatc
agttggagtagttatcataagaatctattagccagcagtgattatgaaggcaccgtcatt
ctatgggatggattcacaggacagaggtcaaaggtctatcaggagcatgagaagagatgt
tggagtgttgactttaatttgatggatcctaaactcttggcttcaggttctgatgatgca
aaagtgaagctatggtctaccaacctggataactcagtggcaagcattgaggcgaaggct
aatgtgtgctgtgttaaattcagtccttcttctagataccatttggctttcggctgtgca
gatcactgtgttcactactatgatcttcgtaacactaaacagccaatcatggtattcaaa
ggacaccgaaaagctgtctcttacgcgaagtttgtgagtggtgaggaaatcgtctctgct
tcaacagacagccagctaaagctgtggaatgtagggaagccatactgcctacgctccttc
aagggccatatcaatgaaaaaaacttcgtaggccttgcttccaatggagattatatagct
tgtggaagtgagaacaactctctttacctgtactataaaggactttctaagactttgcta
acttttaagttcgacacagtcaaaagtgttctggacaaagaccgaaaggaagatgacaca
aatgaatttgttagtgctgtgtgctggagggcacttccagatggggagtccaatgtgctg
attgctgctaacagtcagggtacaattaaggtgctagagttggtatga

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