KEGG   Bos taurus (cow): 520038
Entry
520038            CDS       T01008                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42 isoform X2
  KO
K12018  tripartite motif-containing protein 42
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bta01009]
    520038 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bta04121]
    520038 (TRIM42)
Protein phosphatases and associated proteins [BR:bta01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     520038 (TRIM42)
Ubiquitin system [BR:bta04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    520038 (TRIM42)
SSDB
Motif
Pfam: zf-B_box fn3 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C CHDCT2
Other DBs
NCBI-GeneID: 520038
NCBI-ProteinID: XP_002685089
BGD-bta: BT27722
Ensembl: ENSBTAG00000018346
VGNC: 36335
UniProt: E1BCX4
LinkDB
Position
1:complement(128258497..128288653)
AA seq 725 aa
MDTAMCVCSPCCTWQRCCPRLCSCLCCKFLFTSERNCTCFPCPYKDERNCQFCHCTCSEN
PNCHWCCCSWANDPNCKCCCTASSNLKCYYYESRCCRNATITFRKGRLRSIRTSSKTALR
IGSSDTQLEEVKMMPTANSNLVSHLSCPICGRLRLHSFMLPCHHSLCEKCLRRLQKHAEV
TENFFILICPVCNRSHCMSYSHKMQLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPIVCQ
VCRSQRIAYKRCLTCRLNLCNECLKTFHSDVAMQDHVFVDTSTEDQDEKICIHHPSSRII
EYCRNDNELLCGFCKTSLHNGHDTISLIDACSERAAALFSAIAKFKAVRYEIDNDLMEFN
ILKNSFKADKEVKRKEIRNGFLKLRSILQEKEKTIMEQIENLEVSRQKEIEKYVYVTTMK
VNEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQSTYRPDPQLRLHSLNCMPLDF
AELSSAIHELFPTGPKKVCSSGDSLPSPYPLQSEMMIARKVTFSTHSFNNQQIYQRSSSL
LSFNAPACEKTKIGLEAYGRAQSAAPAKPTDGLYTYWSAGVENQPVQNSNSFHNWYSFND
SSVQTPGPIIIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELITSPPNNVRTELCGQIRD
IMQQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQTA
LQKRF
NT seq 2178 nt   +upstreamnt  +downstreamnt
atggataccgccatgtgtgtttgctctccatgttgtacatggcagagatgttgtccgcgg
ctatgctcctgcctgtgctgcaagttcctcttcacctcggagcggaactgcacctgcttc
ccctgcccttacaaagatgagcgcaactgccagttctgccactgcacctgctccgagaac
cccaactgccactggtgctgctgctcctgggccaatgaccccaactgtaagtgctgctgc
acggccagcagcaacctcaagtgctactactacgagagtcgctgctgccgcaatgccacc
atcaccttccgcaagggccgcctccggagcatccgcacctcctccaagacggccctgcgc
attgggagcagcgacacgcagctggaggaggtgaagatgatgccgacggccaacagcaat
ctggtcagccacctgtcctgccccatctgcggccgcctgcgcctgcactccttcatgctg
ccctgccaccacagcctgtgtgagaagtgcctgcggcggctgcagaagcatgccgaggtc
accgagaacttcttcatcctcatctgccctgtgtgcaaccgctcgcactgcatgtcctac
agccacaagatgcagctacccgagaactatctgcgcggccgcctcaccaagcgctacatg
cagcagcacggctacctcaagtggcgcttcgaccgctccagcgggcccattgtctgccag
gtctgccgcagccaacgcattgcctataagcgttgcctcacctgccgcctcaatctgtgc
aacgagtgcctcaagactttccactcggacgtggccatgcaggaccacgtgttcgtggat
accagcacggaggaccaggacgagaagatctgcatccaccacccgtccagccgcatcata
gagtactgccgcaacgacaacgagctgctctgcggcttctgtaagacctccctccacaac
ggccacgacaccatcagcctcatcgacgcctgctcggagagggctgccgcgctcttcagc
gccatcgccaagttcaaagcagtccgctatgaaattgataatgacctcatggaattcaat
attttaaaaaacagctttaaagctgacaaggaggtaaagcgaaaagagatcagaaatgga
tttctcaagctgcgcagcattctccaggagaaagagaaaaccatcatggagcagatagag
aatctggaggtatccaggcagaaggaaattgaaaagtatgtgtacgtcactaccatgaag
gtgaacgaaatggatggcctgattgcctactccaaggaggcgctgaaggagacaggccaa
gtggcattcctgcagtcagccaagatcctggtggaccagatcgaggatggcatccagagc
acttacaggcccgacccacagctccggctacactccttgaactgcatgcccttggacttc
gctgagctctccagtgccattcacgagctcttccccacaggacccaagaaggtgtgttcc
tctggggactccctgccgtccccctatcccctgcagtcagaaatgatgatcgccaggaag
gtcactttcagcacccacagcttcaacaaccagcagatataccagcgaagctcttcctta
ttgtccttcaatgcccctgcctgtgagaagaccaagataggtctggaagcctatgggcga
gcccagtcagctgcacctgccaagcccacagatggcctctatacctactggagcgcaggg
gtagaaaatcagcctgtgcagaatagcaatagcttccacaactggtactcattcaacgat
agctctgtgcagactccaggcccaattattatctaccagactctggtgtatccaagagct
gccaaggtttactggacatgcccaacagaagacgtggactcttttgagatggaattctac
gaactcattacttcccctcctaacaatgtgcggacagagctctgtggacaaattcgggac
ataatgcagcagaatctggagctacacaacctgacccccaacaccgagtatctgtttaaa
gtgcgagccatcaatgataatggtcccgggcagtggagtgacatttgcaaggtggtaaca
ccagatgggcgtggaaagaaccgagctaagtggggcctgctgaagaatatccagactgcc
ctccagaaacgcttctga

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