Bos taurus (cow): 520759
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Entry
520759 CDS
T01008
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
bta
Bos taurus (cow)
Pathway
bta04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
520759 (LHX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
520759 (LHX5)
Transcription factors [BR:
bta03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
520759 (LHX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
520759
NCBI-ProteinID:
NP_001095531
BGD-bta:
BT23258
Ensembl:
ENSBTAG00000003107
VGNC:
30875
UniProt:
A6QQY6
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All DBs
Position
17:60981908..60991128
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPIAGPHAADNPRFTDMISHPDTPSPEPGLPGS
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggctgcgagcggcccatcctcgatcgctttctgctgaacgtg
ctggaccgcgcgtggcatatcaaatgcgttcagtgctgcgagtgtaagaccaacctctcg
gagaagtgcttctcacgcgagggcaagctctactgcaaaaatgacttcttcaggcgcttt
ggcaccaagtgtgcgggctgtgcacaaggcatctcaccgagcgacctggttcgcaaggcc
cgcagcaaagtcttccacctcaactgcttcacctgcatggtctgcaacaagcagctgtcc
acgggcgaggagctctacgtcatcgacgagaacaagttcgtgtgcaaggacgactacctg
agctcctctagcctcaaggagggcagcctcaactcggtgtcgtcctgtacggaccgcagt
ttgtccccggacctccaggatccactccaggacgatcccaaggagactgacaactcgacg
tcgtcggacaaggagacggccaacaacgagaacgaggagcagaactcgggcaccaagcgg
cgcggcccgcgcaccaccatcaaagccaagcagctggagacgctcaaggccgccttcgcc
gccacgcccaagcccacgcgccacatccgcgagcagctggcgcaggagaccggcctcaac
atgcgcgtcatccaggtgtggttccagaaccgacggtccaaagaacgccggatgaaacag
ctgagcgccctgggtgcccggagacacgccttcttccggagtccgaggcgcatgcgtccg
ctgggcggtcgcttggacgagtcggagatgttggggtccactccgtatacctactacgga
gactaccaaggagactactacgcgcccggaggcaactatgacttctttgcgcacggcccg
ccgtcgcaggcgcagtccccggccgattcgagcttcctggcggcctcggggcccggctcg
acgccgctgggcgcactggagccgccgatcgctggcccgcacgccgccgacaaccccagg
ttcaccgacatgatctcgcacccggacacgccgagcccggagccaggcctgcccggctcg
ctgcaccccatgccgggcgaggtgttcagcggcggccccagcccccccttccccatgagc
ggcaccagcggctacagcggacccctgtcgcaccccaaccctgagctcaacgaggccgcc
gtatggtaa
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