Bos taurus (cow): 521058
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Entry
521058 CDS
T01008
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain isoform X1
KO
K16630
collagen type XXII alpha
Organism
bta
Bos taurus (cow)
Pathway
bta04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
521058 (COL22A1)
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GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
521058
NCBI-ProteinID:
XP_002692646
BGD-bta:
BT17908
VGNC:
27563
UniProt:
A0AAA9S3P4
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Position
14:4095050..4319199
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AA seq
1614 aa
AA seq
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MLVPKHERAMGHLRGSVVAGLLWMLLLWSGDRGCQAQRAGCKTVHYDLVFVLDSSSSVGK
ENFEKVRQWVANLVDTFEVGPERTRVGVVRYSDRPATAFELGRFGSRAAVRAAARQLAYH
GGHTHTGDALRFITRHSFTPRAGGRPGDRAFKQVAILLTDGRSQDLVLPAATAARRAGIR
IFAVGVGEALREELEEIASEPTAAHVFHVSDFDAIDKIRGKLRRRLCENVLCPSVRVEGD
RFKHTNGGTKEITGFDLMDLFSVKTLLGERENGAQSSYVRMGSFPVVQRTEDVFPQGLPD
EYAFVTTFRLRKPSRREDWYIWQVIDQYGIPQVSIRLDGENKAVEYSAVGAMKDAVRVVF
RGPRVHDLFDRDWHKVALSVQAQNASLYVDCALVQTLPLEERENIDIQGKTAIGKRLYDS
VPVDFDLQRVVIYCDSRHAELETCCDIPSGPCQVTVLTEPSPLPQPPPTSGSEQIGFLKT
INCSCPPGEKGEKGFDGPVGLPGPKGDMGATGPAGAPGPKGEKGDTGGGPFVQGEKGEKG
SLGLLGPPGRDGSKGMRGEPGEPGEPGLPGEVGLRGSQGPPGLPGPPGPIGAPGLHGERG
EKGARGEKGEQGLDGFPGKQGETGEQGRPGPPGEPGPRGEKGAVGPAGPPGLPGSVVQRE
GLKGEQGAPGPRGHQGPPGPPGAPGLMGPEGKDGPPGLQGLRGKRGEAGPPGVPGLLGQQ
GPPGPPGVPGPPGPGGPPGLPGEIGFPGKPGPPGQAGPPGKDGPNGPPGLPGPKGDPGDR
GEDGLPGQRGPRGEVGEQGLAGRPGEKGEAGLPGFPGLPGARGEKGDQGEKGALGLPGLK
GDQGVKGEVGPPGPPGLPGTTSLFTPHPRMPGEPGPRGEKGDPGVPGEPGSPGHPGELGP
RGPTGPPGAKGQEGAQGAPGASGSPGVPGLVGPPGPSGPPGSVGPPGSRGPPGKDGERGE
KGAAGEEGSPGPAGPRGDPGSPGPPGPPGRGKDGDPGLRGPPGLPGPLGTKGDRGAPGIP
GSPGNRGEPGMAVAGPPGPSGPPGEKGPPGSRGPPGFPGPQGPAGQDGIPGNPGERGPPG
KPGPSSVLSPGDVNLLVKDVCNDCPPGPPGLPGLPGFKGDKGLPGKPGREGTEGKKGDAG
PRGLPGPPGIAGPQGNKGEHGADGEVGQKGDQGHPGVPGFMGPPGDPGPPGADGIAGTAG
PPGIQGPPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKTGEPGLPGPEGARG
PPGFKGHTGDSGPPGPRGEPGATGPPGREGSPGKDGDTGPTGPQGPQGLRGLPGKSGSPG
SPGEPGTPGSPGQKGTKGENGSPGLPGFLGPRGPQGEPGEKGVPGKEGAPGKPGEPGLRG
ERGDPGIKGDKGPPGGKGQPGDPGTPGHKGHTGLMGPQGPPGESGPAGPPGPPGQPGFPG
LRGESPSMDILRRLIQEELEKQLETKLAYLLAQMPSAHTKPSQGRPGPPGPPGKDGLPGR
AGPVGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPGYA
KDGLPGSPGPQGETGPAGHPGPPGPPGPPGQCDPSQCAYFASLAAARPGNVKGP
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgctggttcccaagcacgagagagccatgggccacctgagagggagcgtcgtggccggc
ctcctgtggatgctgctgctttggagcggggaccgcggctgtcaggcccagagggcaggt
tgcaaaactgtccactatgacctggtgttcgtgctggactcctcctcgagcgtgggcaaa
gagaacttcgagaaggtccggcagtgggtggccaacctggtggacacgttcgaggtgggc
ccggagcgcacgcgggtgggcgtggtgcgctacagcgaccgcccagccacagccttcgag
ctgggccgcttcggctcgcgggctgcggtgcgcgcggcggcgcggcagctggcctaccac
ggcggccacacgcacacgggcgacgcgctgcgcttcatcacacgccacagcttcacgcca
cgagccggcggccgccccggggaccgcgccttcaagcaggtggccatcctgctgaccgac
ggccgcagccaggacctggtgctgcccgctgccacggccgcgcgccgtgctggcatccgc
atctttgccgtgggcgtgggcgaggcgctgcgcgaggagctagaggagatcgcctccgag
cccacagcggcgcacgtctttcacgtgtctgacttcgacgccatcgacaagatccggggc
aagctgcggcgccgcctgtgcgagaatgtgctctgccccagcgttcgtgtggaaggagat
cgctttaagcacaccaatggcggaaccaaggagatcacaggttttgacctgatggatttg
ttcagtgtgaagacgctcttgggggagagagagaacggggcgcagagctcctacgtccgg
atgggatccttccctgtggtgcagaggacggaggacgtgttcccgcaaggtttgcccgat
gagtacgcctttgtcaccaccttccggctcaggaaaccatcccggagagaagactggtat
atctggcaggtcatcgaccagtacggcatcccgcaggtgtccatccgcctggatggcgag
aacaaggccgtggagtacagcgctgtgggcgccatgaaggatgccgtcagggtggtcttc
cggggcccccgggtccacgacctcttcgaccgggactggcacaaggtggccctgagcgtg
caggcccagaacgcttccttgtacgtcgactgtgcactggtgcagacgctgcccctcgag
gagcgggagaacatcgacatccagggcaagacggcgatcggcaagcgcctctacgacagc
gtgcccgtcgactttgacctccagcgggtcgtgatttactgcgactcccgacacgcggaa
ctggagacctgctgtgacatcccctcgggtccgtgtcaggtgaccgtgctgacggaaccc
tccccgctgccccagccgcctcccacctccggcagtgagcagatagggtttttgaagacc
atcaactgctcctgcccacctggagaaaagggtgagaagggcttcgatggccccgtggga
ctccccggcccaaagggagacatgggagccactgggccagcaggcgctcctggacccaag
ggagagaaaggagatacgggcggaggaccttttgtgcaaggagaaaagggtgaaaagggc
tccctgggcctgctgggtcccccaggaagagacggcagcaaaggcatgcggggggagcca
ggagaaccgggcgagccggggctgcccggggaggtgggcctgcggggatcccagggaccg
cctggacttccaggacctcccggccccatcggtgctcccggtctccatggagaacgaggg
gaaaagggagcccggggagaaaagggggagcaaggcctggatggattccccgggaagcag
ggggagactggtgagcagggaagacccggccctcccggtgagccagggccccggggggag
aagggtgccgtgggtcctgcaggcccccctgggcttccaggctctgtggtgcagagagag
ggcctgaaaggcgagcagggagcccccggacctcggggtcaccagggcccacctgggcca
ccaggcgccccgggtctgatgggtccagaaggcaaggatggacctcctggtttgcaaggt
ctccgaggaaagagaggtgaggcgggtcctcctggagtccctggcttgctggggcagcag
ggccccccaggaccacctggcgtcccaggcccccctggacccggaggccccccgggtctg
cctggagagatcggcttcccgggaaagcctgggccccctgggcaggcgggaccgcctgga
aaggatgggccgaatggacccccaggcctgccaggacccaagggagacccaggagacaga
ggggaggacggtctgcccggacagcgcggcccgcggggtgaagttggggagcagggcctg
gctggccgacctggagaaaagggagaggcagggctcccaggcttcccgggactcccaggt
gcgaggggagagaaaggcgaccagggagagaaaggtgccctggggcttccgggactgaaa
ggcgaccaaggtgtaaagggggaagtgggcccaccagggccccctggattacctggcact
acttccctgttcacaccacacccgagaatgcccggagaaccagggcccaggggagagaag
ggcgatcctggcgtgcctggggagccggggtcgccaggtcatcctggagaactggggcct
cggggacccactggaccaccgggcgccaagggacaagaaggcgcccagggagcgcctgga
gcatccgggagccccggagttcctggacttgtagggccccctggccccagcggcccccca
gggagcgtgggtcccccgggctccagaggcccccctgggaaagatggggagcgtggtgag
aagggagcagcaggagaagaagggagcccagggccagccggccccaggggcgatcctggt
tcccccgggccccccgggccccctggaagagggaaagatggagacccgggacttcgtggc
ccacctggattgccaggacctctgggaaccaagggggaccgtggtgcgcctgggatcccc
ggctctcctggcaaccgtggagagccaggcatggcggtcgccggccctccgggcccctct
ggaccaccaggagaaaaaggtcctccgggatctcgaggcccgcctgggtttcccggcccc
cagggaccagctggccaggatggtataccaggaaatccaggagaaagagggcctcctggc
aaaccaggcccctcttcagtactgtctccaggggacgtaaatctcttggtgaaggacgtg
tgcaatgactgtcccccgggtcccccaggcctccctggtcttccaggttttaaaggggac
aaaggtctcccaggaaagccagggagagaaggcacagaagggaaaaagggggatgctggg
cccagaggcctcccagggcccccaggaatagctggacctcagggaaataaaggagaacat
ggtgcagacggtgaggttggacagaaaggtgaccagggtcatcccggagttcccggtttc
atgggccccccaggggaccctggaccaccaggagcagacggaatagcgggaactgctgga
ccaccaggaatccaaggacccccagggaaagaaggtcctcctggcccccaaggcccgtct
ggattacccggcatcccaggagaagaaggcaaagagggcagagatggaaaaccagggccc
cccggagagccgggcaaaacaggagagccgggtctgccaggaccagagggtgcccgcggt
ccccctggcttcaagggacacacaggcgactctggcccacctggcccccggggagagcct
ggcgccacggggccccctggccgggaggggtcaccagggaaagacggtgacactggacct
acagggccacagggtccccaaggactgaggggcctaccgggtaagagtgggtcacctgga
tcaccgggagagcctggcaccccaggaagccctggccagaagggaaccaaaggagaaaac
ggcagcccagggctcccgggcttcctgggtccccgggggcctcagggggagccaggcgag
aaaggagtcccaggcaaggagggggcacctgggaagccaggagagccaggactcagagga
gaaaggggagatcctggcatcaaaggtgacaaaggccctcccggtggcaagggccagccc
ggcgaccccgggaccccaggccacaagggtcacacaggcctcatgggcccccaggggcca
cctggggagagcgggccggccggtcccccagggcctccgggccagccaggatttccaggg
ctaaggggcgagtctccatccatggacatcctgcggcggctcatccaagaggaactggag
aaacagctggaaaccaaactcgcctacctcctggcccagatgccctctgcacacacgaag
ccctctcaaggcagacccggacccccagggcctcctggaaaagatgggcttccaggtcgg
gcaggccccgtcggggagccaggaaggccagggcaagggggtctggagggaccctctggc
cccataggtcccaaaggtgagcgaggagccaaaggtgacccaggggcacctggagttggc
ctccgaggcgagatgggaccccccgggatcccaggtcagcccggggaacctggctatgct
aaagatgggcttcccgggagtcccgggcctcaaggagagacaggaccagctggacacccc
ggccccccaggtccccccggccccccgggccagtgcgacccctcacagtgtgcctacttc
gccagccttgctgctgctcgacctggtaacgtgaagggcccctag
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