Bos taurus (cow): 522040
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Entry
522040 CDS
T01008
Symbol
SMG8
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
522040 (SMG8)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
522040 (SMG8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
522040
NCBI-ProteinID:
NP_001073755
Ensembl:
ENSBTAG00000003365
VGNC:
55871
UniProt:
A1A4J7
LinkDB
All DBs
Position
19
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AA seq
954 aa
AA seq
DB search
MAGPVSLRELLMGASAWTSSESPEGSPTEGGGSAAGGPEPPWREDEICVVGIFGKTALRL
NSEKFSLVNTVCDRQVFPLFRHQDPGDSGAGIRTEAGAVGEAGGAGDPGAGAGAGAGAGA
GDPVRGGVTAAEGNRTEPGSQDYSLLQAYYNQESKVLYLLLTSICDNSQLLRACRALQSG
EAGGGLSLPHAEAHEFWKHQEKVQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDG
LRQKVLPLLKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRNQDPAHPDKPK
KHSPKRRLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGSQEEDPVGMLL
DQLKSHCTVKDPESLLVPAPLSGSRRYQVMRQHSRQQLSFHTDTSSSSSSGQLVDFTLRE
FLWQHVELVLSKKGFDDSVGRNPQPSHFELPTYQKWISAASKLYEVAIDGKEEDPASPTG
ELTSKILSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQAL
RVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEA
DRNPPVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPV
FEPSTPDPAPAKNESSPAPPDADADKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPAD
PQAGGDNPEVHGQGEVKTEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLG
PAKSYNFHTGLDQQGFIPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAVPGKRSAVV
MGRGRRRDDIARAFVGFEYEDSRGRRFMCSGPDKVMKVMGSGPKESALKALNSDMPLYIL
SSSQGRGLKPHYAQLMRLFVVVPDAPLQIILTPQVRNITFCVVRQSCLLFVSIV
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcccgtcagcttaagagagcttctaatgggcgcttcagcctggacaagctct
gagagtcccgagggatcccctacagagggtggtgggagcgcggctggcggaccggagcct
ccttggcgggaggatgagatctgcgtggtgggaatcttcggcaaaacggctctgcgcctg
aattccgagaagttttcacttgtgaacacggtgtgcgaccgacaggtctttcccctcttt
cgccaccaagatcctggagattcgggggctggaatcaggaccgaggctggggccgtcggg
gaggctggcggagccggggaccctggggctggggccggggccggggccggggccggggcc
ggggatccagttcggggaggtgtaactgccgcggaaggcaaccgaactgagccaggttcc
caggattacagccttctgcaagcctattacaaccaggaaagcaaagttctataccttctt
cttacttccatctgtgacaattcccagcttctgcgggcttgtcgggcccttcagagcggg
gaagctggaggtggcctctctttacctcatgcagaagcgcacgagttctggaagcatcaa
gagaaggtgcagtgcctcagtctcctttaccttttctccgtctgtcacatcctgcttctg
gtccatcccacttgttcctttgacatcacttatgatcgagtattcagagccctggatgga
ctgagacagaaagtactgccccttctcaaaacagctattaaggattgtccagttggtaaa
gactggaaactaaactgccgaccttgcccacctagactccttttcctttttcaactcaat
ggagcactcaaggtagaaccccctcggaaccaagacccagctcatccagataagcccaag
aagcattctcccaaaaggagactgcagcatgccctggaggaccagatctatagaatcttc
cggaagagtcgtgtcttgactaatcagagtatcaactgcctctttactgtacctgccaat
caagcttttgtgtacatagttcccggaagccaggaggaggatccagtaggcatgttgctg
gaccaacttaagagtcactgtactgtgaaagaccctgaatctttgttggtccctgcacca
ctttctgggtccaggcgataccaggtgatgaggcagcacagcagacaacagctttctttc
cacactgacaccagcagttccagttcttcggggcagctagtggatttcacgctgcgagag
ttcctatggcagcatgtagagctagtactaagcaagaaaggttttgatgacagtgtgggc
aggaacccacagccttcccattttgaacttcctacttatcagaagtggatctcagcagct
tcaaaactgtatgaagtagctattgatgggaaagaggaggacccagcatctcccactggg
gagttaacatctaagattttaagcagtattaaagtcttggaaggatttttggatattgac
acaaaattctcagagaaccgttgccaaaaagctttaccgatggcccatagtgcctaccag
tcaaatttgcctcataattacacaatgactgtccacaagaatcagcttgcccaggctctt
cgagtgtacagccaacatgctaggggtccagcctttcacaagtatgccatgcagttacac
gaagactgctacaagttttggagcaacggccatcaactctgtgaggagaggagtttaact
gatcaacactgtgtacacaaatttcactccttacctaaatcaggagaaaaaccagaggct
gatagaaatcctcctgtgctgtatcacaatagccgagctcgatccactggcgcctgtaac
tgtggaaggaaacaggcaccccgagacgatccctttgatatcaaggcagctaactatgac
ttttatcagcttctggaagaaaaatgttgtggaaaattggatcacatcaatttcccagta
tttgaaccaagtactccagatcctgctcctgccaaaaatgaatcatctcctgctccccca
gatgcagatgctgataaacttaaagagaaagaacctcaaacccaaggagagagcacaagc
ctgagtttagctttgagtttaggccagtctactgatagtttaggtacctatccagccgat
ccacaagcaggaggagataatccagaagttcatggccaaggtgaagtaaaaactgagaag
agaccaaacttggttgatcggcaggcatccacagttgaatatctcccaggcatgcttcat
tcaaattgccccaaaggtctcctacccaaattctccagctggtctttggttaaactaggc
cctgctaagtcttacaactttcatactggtttggaccaacagggcttcattccaggaaca
aactatcttatgccctgggacattgtcatcaggactagagctgaagatgaaggagactta
gacacgaattcttggcctgctccaaataaggctgttcctggtaagagaagtgcagttgtc
atgggcagaggaagacggcgagatgacatagcgcgagcatttgtgggctttgaatacgaa
gactctcgaggtcgaagatttatgtgctcaggacctgacaaagtaatgaaagtaatggga
agtggccccaaggaatcagctttaaaagccctgaatagtgacatgcccttgtatattctg
tcatcctctcagggtagagggctgaaaccacattatgctcaacttatgaggctttttgtt
gtggttcctgatgctcctttgcagataatcttaacgcctcaggtaagaaatataactttt
tgtgttgttagacaatcatgtttgttgtttgtttcgattgtttga
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