Bos taurus (cow): 522045
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Entry
522045 CDS
T01008
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bta
Bos taurus (cow)
Pathway
bta03082
ATP-dependent chromatin remodeling
bta04714
Thermogenesis
bta05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
522045 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
522045 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
522045 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bta03021
]
522045 (SMARCC1)
03036 Chromosome and associated proteins [BR:
bta03036
]
522045 (SMARCC1)
Transcription machinery [BR:
bta03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
522045 (SMARCC1)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
522045 (SMARCC1)
PBAF complex
522045 (SMARCC1)
GBAF(ncBAF) complex
522045 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
BRCT_2
Chromo
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
522045
NCBI-ProteinID:
XP_024839053
Ensembl:
ENSBTAG00000031567
VGNC:
58414
LinkDB
All DBs
Position
22:51958003..52083022
Genome browser
AA seq
1105 aa
AA seq
DB search
MAAAAGGGGLGTTAGAAGAGGAAAATGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHTDAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLLQSNCLARPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHVYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDPGKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQIPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDTDAQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKEAEENKE
LTDSCKERESDVGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGPNPQQAHQHSGGPGLAQLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMMPGQPMPGRMMPTVAASIHPPGSGPTPPGMPPIPGNILGPRVPLTAPNGMYPPPPQQ
QPPPPAPADGGPPPPAPGPPASAAP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcggcggagggctggggacgacggccggcgccgcgggcgcagga
ggcgcggcggcggccacgggcctggccgtttatcggcggaaggacggaggcccggcgagc
aagttttgggagagcccggagacagtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcacacagatgctcctaccaataaaacactggctgggctg
gtggtacagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaagctcccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaaatacaaaaatgaacagggatggcggaggtttgatctgcag
aatccatcccgaatggatcgtaatgttgaaatgtttatgaacattgaaaaaacattgctt
cagagcaattgtctggccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatataatcaaacgacatcagggaacatttactgatgagaagtca
aaagcttcccaccacgtttatccatatccttcctcacaagaggatgaagagtggttgaga
cctgtgatgagaaaagacaagcaggtgttagtacactgggggttttaccctgacagctat
gatacttgggtccatagtaatgatgttgatgcagaaattgaagatccaccgattccagaa
aaaccatggaaggttcatgcaaaatggattttggacactgatgttttcaatgaatggatg
aatgaggaggattatgaggtggatgagaacaggaagcccgtgagttttcgtcagcgaatt
tcaacaaagaatgaagagccagtcagaagtccagagagaagagatagaaaagcatcagct
aatgctcgaaagaggaaacattcaccttcccctccgccccccacacccacagaatcccgg
aagaagagtgggaagaaaggccaagctagtctttatgggaagcggagaagtcagaaagag
gaagatgagcaggaagatcttaccaaggacatggaagacccaacacctgtacccaacata
gaggaagtggttcttccaaaaaatgtaaacccaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtggcagatctagatgagcaggatgaagaaacagtcacgacaggcgga
aaggaagatgaagatcctggcaaaggtgatcagagtagatccgttgaccctggtgaagat
aatgtgactgagcagaccaatcacattattattcctagctatgcatcgtggtttgattat
aactgtattcatgtgattgaacggcgtgctcttcctgagtttttcaatggaaaaaacaaa
tccaagaccccagagatatacttggcatatcgaaatttcatgattgacacataccgccta
aatccccaagaatatttaaccagcactgcttgtcggaggaacttaactggagatgtgtgt
gctgtgatgagggttcatgcctttttagaacagtgggggcttgttaattaccaagtggat
ccagaaagtcgacccatggcaatggggcctcctccaactcctcatttcaatgtgttagct
gataccccctcggggcttgttcctctacatcttcgatcacctcagattcctgctgctcag
cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt
cttcgtactgacatctactccaagaaaaccttagcaaagagtaaaggtgctagtgctgga
agagaatggaccgaacaggagactctgctgctcttggaggctctggagatgtataaggat
gattggaacaaagtgtcagagcacgttggaagtcgcactcaggatgaatgcatccttcac
ttcttgaggcttcccattgaggacccataccttgagaattctgatgcttccctggggccc
ctggcctaccagcctgtccctttcagtcagtcaggaaacccagtcatgagcactgttgct
tttttggcgtctgtggtggatcctcgtgtggcgtctgctgcagccaaagcagctttggag
gagttttctcgggtccgggaggaggtgcccctggaattggtggaggctcatgtcaagaaa
gttcaagaagcagcccgagcctccggaaaggtggatcccacctacggcctggagagcagc
tgcattgcaggcacggggccagatgagccagagaagctggaaggagctgaagaggaaaaa
atggaaacagatactgatgctcagcagcctgaaaaggcagaaaacaaaggggaaaatgaa
actgatgaaggtgataaagcacaagacggagaaaatgaaaaaaacagtgaaaaggaacag
gatagtgaagttagtgaggataccaaatcagaagaaaaggaggctgaagagaacaaggaa
ctcactgattcttgtaaagaaagagaaagtgatgttgggaagaagaaagtagaacatgaa
atttctgaaggaaacgtagccacagccgcagcagctgctcttgcctcagctgcaacgaaa
gccaagcacctggctgccgtggaagagaggaagatcaagtctctggtagctcttctggtt
gagacacaaatgaagaaactggagattaaacttcgacattttgaagaactagaaactatc
atggacagagagaaagaagctttagaacaacagaggcagcagttgcttacggagcgccag
aacttccacatggagcagctgaaatatgctgagttgcgagcccgacagcaaatggaacag
cagcagcatgggccgaaccctcaacaggcacaccagcactcaggaggacccggcctggcg
cagctgggagcagcaggacatcctggcatgatgcctcatcagcagccccctccctaccct
ctgatgcaccaccagatgccaccgcctcatccaccccagccaggtcagataccaggccca
ggttccatgatgcctgggcagcccatgccaggccgcatgatgcccaccgttgcagccagc
atccacccccctgggagtggccccacccctcctggtatgcctccaatcccaggaaacatc
ttaggaccccgggtacccctcacggcacctaacggcatgtatccccctccgccgcagcag
cagccaccacctccagcacctgcggacggaggccctccgcctcctgctcctggcccacca
gcctctgctgcgccctag
DBGET
integrated database retrieval system
