Bos taurus (cow): 522908
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Entry
522908 CDS
T01008
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
bta
Bos taurus (cow)
Pathway
bta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
522908 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
522908 (ERCC6)
03400 DNA repair and recombination proteins [BR:
bta03400
]
522908 (ERCC6)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
522908 (ERCC6)
DNA repair and recombination proteins [BR:
bta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
522908 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
522908
NCBI-ProteinID:
NP_001178272
BGD-bta:
BT15945
Ensembl:
ENSBTAG00000032527
VGNC:
28572
LinkDB
All DBs
Position
28:complement(43630693..43704022)
Genome browser
AA seq
1481 aa
AA seq
DB search
MPNERIPHSSQTQEPDCSRSQDVSGSEEGTIKQEKDGDMDLGQSLPSCSSANGPSTSTEG
CLLELPRRGPALLHIDRHQIQAVEPGAQALELQGLGVDVYDQDVLEQGVLQQVDSAIHEA
SCVAQLAEAEKEYRSVLDDLTSCTTSLRQIDKIIEQLGPQAATNKDINRKLDSVKRQKYN
KEQQLKKITAKQKRLQAVLGGAEVQVELGLGGLEEEDAEAEPSCLGSMLMPAQETAWEEL
VRTGQMTPFGTKIPQKQEKKPRKLMLNEASGFEKYLADQAKLSFERKKQACNKRAAKKAS
ASATSEPSSALNENKPDERGKAVSKTDKRLKKQIKKLQKRALQLQGQVGLLKGKKPWDCD
VRPNAQGDSEDEESEYLPTEEELEETVGADLPGEGSDWEQRLVLNRRKRQKKVTVQEIDD
DFFPSSGEEAEATGGGRKVVRCRDDGDEDYYKQRLRRWNKLRLKDKEKSLRLEDDSEESD
AEFDEGFKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLS
YSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPAFRVAVLHETGSFTHKKEKL
VRDIARCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHR
IILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKC
ACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILN
GEMQIFSGLVALRKICNHPDLFSGGPKNLKGIPDEELGEDQFGYWKRSGKMIVVESLLKI
WHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVF
LLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEE
KIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDTSQSTETSAIFAGTGSDVQ
TPKRHLKRRLQQACGTDQSVPVDRQFPDCKTSASAAMSSEEVCAASVSEVNAVTSDQGIP
LNDAVQTPHSLTSSERLGEEADAVSRPRESSVIHGNGNSSDSPRVSRTCGVSGEESVSEK
ESLSDKRESCQVQREALWENEQTENNFYKHKSKMKHHVAEEPMEKHLRPNQKPKSSKHRR
DAKFEGTRIPHLVKKRQYRRRDPAAESEAKERSHDDYVLEKLFRKSAGVHSVMKHDAIMD
GASPDHVLVEAEANRVAQDALRALRLSRQQCLGAASGVPTWTGHRVLAGAPAGKKSRFGQ
KRNSSFSVQRPSSTSPKEKCQDSTVKKEGKDHVSEHFSGKAEDTESSSGALTSSSLLAKM
RARNHLILPERLESESGRLPEAAAPLPCSTEHDDLLVEMRNFIAFQAQADGQASTREILQ
EFESKLSASQSCVFRELLRSLCTFHRTSAGEGIWKLKPEYC
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgaaagaatcccgcactcaagtcagactcaggagccagactgttcacggagc
caggatgtcagtggcagtgaggaggggacaatcaagcaggagaaggatggcgacatggac
ctggggcagagcctcccctcttgttcctctgctaatggaccctccacttccaccgaaggg
tgtctcttggaacttcccaggagagggccagccctgctgcacatcgacagacatcagatc
caggccgtggagcccggtgcacaggccctggagctgcaggggttgggtgtagatgtctac
gaccaggatgtgctggagcaaggggtgcttcagcaggtggatagcgccatccatgaggcc
agctgcgtggcccagctcgccgaggcggagaaggagtaccggtcagtcctggacgacctc
acgtcatgtacgacatccttaagacagattgataaaattattgaacaacttggccctcaa
gctgccaccaacaaagacatcaacaggaaactagactctgtaaaacgacagaagtataac
aaggaacaacagctgaagaagatcacggcaaaacaaaaacgactccaggccgtcctcgga
ggagcagaggtgcaagtggaactcggtctcggcgggctggaggaggaggatgctgaagca
gagccctcctgccttggcagcatgctcatgcccgctcaggagaccgcttgggaagagctc
gtccgcactggtcagatgacaccttttggtaccaagatccctcagaagcaggagaaaaag
cccagaaaactaatgctcaatgaagcatcaggctttgaaaagtatttggcagatcaagcg
aaactgtcctttgaaagaaagaagcaagcttgtaataaaagagcagctaaaaaagcttcg
gcctcggccacttctgaaccgagctcagcactcaatgaaaacaaaccagatgagagaggc
aaagctgtatcgaaaacagataaacgcctgaaaaaacagatcaagaaactccagaagagg
gctcttcagctccaggggcaggtcggattgctaaagggaaagaaaccctgggattgtgat
gtgagaccaaacgcacagggggactctgaggatgaagagtctgagtacttgcccacagag
gaggagctggaagagacggtgggtgctgacctgcccggggaaggctctgactgggagcag
aggctggtgctcaatcgccggaaacggcagaagaaagtcactgtgcaggagatcgatgat
gacttttttccaagttctggggaagaagctgaagccaccggaggaggccggaaagtagtg
agatgccgagacgatggagatgaagattattataagcagcgattaaggagatggaataaa
ctgagactgaaggacaaagagaagagtctgaggcttgaagatgattctgaggaaagtgat
gctgaatttgacgaaggttttaaaatgccgggttttctgttcaaaaagctttttaagtac
cagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcaggaggaattctg
ggagacgaaatgggattgggcaagaccatccagataattgccttcttggcaggtctgagc
tacagcaagatcaggactcgtggttcaaattacaggttcgaggggttgggtccgaccatc
attgtctgtccgacaacggtgatgcatcagtgggtgaaggagtttcacacgtggtggcct
gcattcagagtggcagttctgcacgaaaccgggtcctttacccacaagaaggagaaacta
gttcgagacattgctcgttgtcacgggattttgatcacttcttactcctacattcgactg
atgcaagatgatatcagcaggcatgactggcactatgtgatcttggacgagggacacaaa
attaggaatccaaatgctgccgtcacccttgcttgcaaacagttccgcacgcctcatcgc
atcatcctgtccggctcaccgatgcagaataacctgcgagagctgtggtctctcttcgac
ttcatcttcccaggaaagctgggcacactgcctgtgtttatggagcagttctcagtcccc
atcaccatgggggggtattcaaacgcctccccggtacaggttaaaactgcttataagtgt
gcgtgtgtcttacgagataccataaatccatacctactgcggagaatgaagtcggatgtc
aaaatgagcctttctttgccagataaaaacgaacaggtcttattttgccgtcttacagat
gaacaacataaagtctaccaaaatttcattgattccaaagaagtttacaggattctcaat
ggagagatgcagattttctctggactcgtagccctaagaaaaatctgcaaccaccctgat
ctcttttccggaggccccaagaatcttaaaggcattccagacgaggaactaggagaagat
cagtttggatactggaaacgttctgggaaaatgatagttgttgagtccttgctgaaaata
tggcacaagcagggccaacgagtgttgctgttttctcagtccagacagatgctggacatc
cttgaagtattcctcagagcccaaaagtattcttatctcaagatggatggcaccacggcg
atagcttccagacagccactgattacaagatacaatgaggacacatccatatttgtgttt
cttctgaccactcgggtgggtggcctaggagtcaacctgacgggggcaaaccgcgtcatc
atctatgaccccgactggaacccaagcacagacacgcaggcccgggagcgagcgtggagg
attggccagaagaagcaagtgacggtgtacaggcttctaaccgcaggcaccattgaagaa
aagatctaccaccgacaaatcttcaagcagtttttgacaaatagagtgctgaaagatcca
aagcaaagacgatttttcaagtccaatgatctttatgagctgttcactctgagcagtcct
gatacatcccagagcactgaaacaagtgctatttttgcaggaactggttcagatgttcag
acacccaaacgccatttaaaaagaagacttcaacaggcctgtggaacagaccagagtgtc
ccagtggacagacagttccctgattgtaagacgtctgcaagtgctgccatgtcatctgaa
gaggtatgtgcagcatcggtcagtgaagtgaatgcagtaacttctgaccaaggcattcct
ctgaatgatgccgttcagacacctcatagtctgaccagcagtgagaggcttggagaagag
gcagacgcagtctccagaccacgggagtcctcagtgatccatggaaatgggaacagttca
gattccccaagagtcagcagaacgtgcggggtgtctggtgaggaaagcgtcagtgaaaag
gagagtctttctgataaaagagaaagctgccaggttcagagagaagctctttgggagaat
gagcaaacagaaaataatttttataagcacaagtcgaaaatgaaacatcacgtggcagaa
gagcccatggagaaacacctgaggccgaatcagaagccgaagagctctaagcaccgcaga
gacgccaagtttgagggaactcgaattccacacctggtgaagaagaggcagtaccggagg
cgagaccctgcggctgagagcgaggccaaggagcgcagccacgacgactacgtcctggag
aagcttttcagaaagtcagcgggcgtgcacagcgtcatgaagcacgacgccatcatggac
ggagccagtccagaccatgtcctggtggaggcggaggccaaccgcgtggctcaggatgcc
ctcagagctctgaggctgtctcggcagcagtgtctgggagcagcgtctggtgtccccacg
tggactggccacagagtgcttgccggtgcaccagcaggaaaaaagagcaggttcggtcag
aagaggaactccagtttctccgtgcagcgtccctcttcaacatctccaaaggagaaatgc
caggacagcactgtgaagaaggagggaaaagatcatgtttcggagcattttagtggaaaa
gctgaagacacagagtcttcatccggagctctcacttcgtcctcactgttggcgaaaatg
agagctagaaaccacctgattttgccagagcgattagaaagtgaaagtgggcgcctccca
gaagccgctgctccgctgccctgcagcacagaacacgatgacctgctggtggaaatgaga
aacttcattgcctttcaggcccaagccgatggccaggccagcacccgggagattctgcag
gagttcgagtccaagttatcagcatcacagtcttgtgtctttagagaactcttgagaagt
ctgtgcacttttcatagaacttctgctggcgaaggcatttggaaactcaagccagaatac
tgctga
DBGET
integrated database retrieval system
