Bos taurus (cow): 523479
Help
Entry
523479 CDS
T01008
Symbol
ABCA12
Name
(RefSeq) glucosylceramide transporter ABCA12
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
bta
Bos taurus (cow)
Pathway
bta02010
ABC transporters
bta04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
523479 (ABCA12)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
523479 (ABCA12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bta02000
]
523479 (ABCA12)
Transporters [BR:
bta02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
523479 (ABCA12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_23
TraF
DrrA1-3_C
Motif
Other DBs
NCBI-GeneID:
523479
NCBI-ProteinID:
NP_001178223
Ensembl:
ENSBTAG00000003472
VGNC:
25456
LinkDB
All DBs
Position
2:complement(103002532..103202095)
Genome browser
AA seq
2593 aa
AA seq
DB search
MASQLHQLRVLVWKNWLGVKRQPLWTLVLILWPVMIFIILAITRTKFPPKPKPTCYLAPR
NLPSTGFFPFLQTLLCDTDSKCKDTPYGPQDLLRRKGINRAVFKDSKILRKSSNLEKDSN
LSLQSTEVPQKRHASPATIFPSLSADLESTGTDTFNGSQVLARILSLEKLLQQNSTSEDI
RRELCENYPGYIADYAFSWTTLGKNVLNIFCLSNKTFLESSLQELTNQFSQLSRDPNNQK
TMFQEMVKVLSFFSQVQEQTAVWELLSSFPNVFQNDSTLSNLFDALRNANSALRVVQKVY
PRVTTNEGFRTLHKSVKHLLYTLDSPSEGGSDNTTHLWSEEDGQSLSPSSLAAQLLILEQ
FENALLNISADSPYIPYLACVRNVTGNLARGSKESLRMLHSTIRFKKSFLQNGSYEDYLP
PVPEVLKSKLSQLRNLTKLLCEPETFNSIEEMCQLSSVDFGKLCEESALHVQLLEAAELG
TEIATSLLYHDSVLSEKLRDLLSGEPSKINLDMDWFLEQALQMNYLENITRLTPTIEAML
HVNNSADTFEKPGQLIEMFKNVDELKEELRRATGMSNQSINNLLAIPISDNRAEIISSVF
WLHSCDGNMTNPKLEDAMKEFCIMPLPERSRLSYLIGLTFLHYLDIYNFTYKVFFPRENQ
KPIEKMIELFIRLKEILNQMASGTRPLLDKMRSLKQMHLPRSFPLTQAMYRNNRINTPQG
SFGTISQALCSQGITTEYLVALLPSSQRQKGNHTKDFLTHKLSKEQIAAKYGIPLHATPF
CFSLYKDIINMPAGLVIWAFLKPMLLGRILYAPYTPVTKAIMEKSNVTLRQLAELREKSQ
EWMDKSPLFMNSFQLLNQTIPMLQNTLRNPFVQVFVKFSVGLDAVELLKQIDELDILRLK
LENSIDLIDQLSILSSLTVNISSCVLYDRIQAAESVDKMEREAKRLYKSNELFGSVIFKL
PPNSSRHRSYDSENVSLPPVVKYTIRMSLKTSQTTRNIRAKIWAPGPHNSPSHNQIYGRA
FVYLQDSIERAIIELQTGRNSQEIAVQVQAIPYPCYMKDNFLTSVSYSLPIVLMVAWVVF
IAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESVAFLLITIGILIIILKFGNILP
KTNGFILFLYFSDYSFSVIAMSYLISAFFNSTNIAALIGSLIYIIAFFPFIVLITVENEL
SYVIKVFMSLLSPTAFSYAGQYIARYEEQGIGLQWENMYSSPVQDDTTSFGWLCCLILAD
SFIYFLIAWYVRNVFPGTYGMAAPWYFPFLPSYWKERLGCAEVNHEKSNGLMFTNIMMQN
TNPSASPEYKFSSNIEPEPKDLTVGVALHGVTKIYGSKIAVDNLNLNFYEGHITSLLGPN
GAGKTTTISMLTGLFGASAGTIFVYGKDIRTDLHVVRKNMGVCMQHDVLFSYLTTKEHLL
LYGSIKVPHWTKKQLHEEVKRTLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVV
ILDEPSTGVDPCSRRSIWDVISKNKTARTIILSTHHLDEAEVLSDRIAFLEQGGLRCCGS
PFYLKEAFGDGYHLTLTKKKSPNLNASTVCDTTAVTAMIQSHLPDAYLKEDIGGELVYVL
PPFSTKVSGAYLSLLRALDSGLGDLNIGCYGISDTTVEEVFLNLTKESQKNNRSLEHLTT
KKIGSSSTNGISTPDDLSVSSSNFTDRDDKILTRGERSVGFELLLKKIMAILIKRFHHTR
RNWKGFIAQVILPIVFVTTAMGLGTLRSSSSSYPELEITPSLYGTSEQTTFYANYHPSTK
DLVSAMWSFPGIDNMCLNISDPRCLNKNSLGKWDSSGEEPITNFGVCSCSENTQECPKFN
YSPPHRRTYSSQVIYNLTGHHLENYLISTANEFTQKRYGGWSLGLPLTKDLLFDVTTVPA
NRTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSKYDAARHGIIMYSHPYPGVQDQEQAT
MSSLIDILVALSILMGYSVTTASFVTYVVREHQTKAKQLQHISGISVTCYWVTNFIYDMA
FYLVPVAFSIGVITIFKLPAFYSENNLSAVSLLLLLFGYATFSWMYLLAGFFHDTGMAFI
TYVCINLFFGINSIVSLSVVYFLSKEKPNDATLELISETLKRIFLIFPQFCFGYGLIELS
QQQSVLDFLKAYGVEYPSETFEMDKLGAMFVALVSQGTMFFFLRLLINEWLINKLRLFFR
KFSSSSVIETIDEDEDVQAERFRVEKGANDYDLVQLHRLTKTYQLIHKKIIAVNNISIGI
PAGECFGLLGVNGAGKTTIFKMLTGDIIPTSGNILIRNKTGSLAHVNSHSSLVGYCPQED
ALDDLVTIEEHLYFYARVHGIPEKDIKETVQKLLGRLHLMPYRDKVTSMCSYGTKRKLST
ALALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQNKCSVILTSHSMEECEALCTRLA
IMVNGRFQCIGSLQHIKSRFGRGFTVKVHVKNARVSMEALTRFMQLHFPKTYLKDQHLSM
LEYHVPVTAGGVANIFDLLEANKTALNITNFLVSQTTLEEVFINFAKDQKCYETADTSSQ
GSTVSTDSQEDQL
NT seq
7782 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccagcttcatcagcttcgggttctggtctggaaaaactggctgggtgtcaaa
agacagccgctttggacacttgtcttgattttatggccagttatgattttcataattttg
gctattacccggaccaaatttcctccaaaaccaaagccaacttgttaccttgcacctcga
aaccttcctagtactggattcttcccgttcctgcaaaccctactctgtgacacagactct
aaatgcaaagacacaccctatgggccacaagatctgcttcgtaggaaaggaattaacaga
gcagtatttaaagacagtaaaatcctgagaaagtcatccaacctggagaaggacagcaat
ttatcactccagagtactgaagttccacaaaaaaggcacgcgtcaccggccacaatattt
cctagtctaagtgctgatctggaaagtactggaacagatactttcaatggtagtcaagtg
cttgcccggattcttagtttggaaaagcttttacagcaaaattcaacttcagaagatata
agaagagaactgtgtgagaactatccaggttatattgctgattatgccttctcttggacc
actctagggaaaaatgttcttaatatattttgcctgtccaacaagacctttttagagtct
tctctccaagaactaacaaaccaattctctcagctatcacgtgatccaaacaaccagaag
acaatgtttcaggaaatggttaaagtactatcctttttctcacaagtacaagagcagaca
gctgtgtgggagcttctctccagttttccaaatgtgttccagaatgacagcacactaagc
aatctatttgatgcgcttcgaaatgcaaacagtgcgctgcgggttgtgcagaaggtttat
ccacgtgtcacaactaacgaaggtttcagaactctccataaatctgttaaacatctgctg
tataccctggactccccatctgaaggtggctctgataatacaacacatttgtggagtgag
gaagatggacagtcactatccccaagcagcctggctgcacagctcctaatactggaacag
tttgaaaatgccctcttaaatatatcagcagatagtccttatattccttatttggcatgc
gtgagaaatgtcactggcaatttagccaggggatcaaaagaaagtttaagaatgctgcac
tctacaattcgatttaaaaaatcttttcttcaaaatggttcctatgaggattacctccct
ccagttcctgaagtcttgaaatcaaaactgtctcagcttcgaaacttgaccaagcttctt
tgtgagcctgaaactttcaattcaatagaggaaatgtgccagctgtccagtgtggacttt
gggaagctatgtgaagagagtgcattgcatgtgcagctcctggaagcagcagagcttggc
accgaaatagccaccagcttactgtatcacgacagtgttctgtctgagaaactgagggat
ttgctttctggggagccaagcaaaattaatttagatatggattggtttctagaacaggca
ttgcaaatgaattacttggaaaatatcacacggttaacgccaaccatagaagccatgctg
catgtcaataacagtgcagacacctttgaaaaaccaggccagttaatagaaatgtttaaa
aatgttgatgagctgaaagaagaactgaggagagcaacaggaatgtccaatcagagtatc
aacaatttgctggccattcccatctctgacaacagagctgagattatttctagtgtgttc
tggttgcattcttgtgatggaaatatgaccaatcccaaattggaagatgcaatgaaggaa
ttctgcatcatgcctcttccagagagatcccgtctatcttacctcattggacttacattt
ctgcactacttagacatttacaacttcacatacaaggtatttttccctagggaaaatcaa
aagccaatagaaaagatgatagaactcttcataaggctaaaagagatcctcaatcagatg
gcttctggcacgcgaccgctgctagacaaaatgaggtccctgaaacaaatgcatctgccc
agaagttttccactaacacaggcaatgtatagaaacaaccggataaacactccccaagga
tcatttggtaccatttcccaagcactgtgctcccaaggaattaccactgaatatttagtt
gccttgctgccctcttctcagaggcagaaaggcaatcacactaaggactttctaactcat
aaattaagtaaagagcaaattgctgcaaagtatggaattcccttacatgccacaccgttt
tgcttttccctttataaggacatcattaatatgcctgctggactggtgatttgggctttc
ttgaaacccatgttgttgggaaggattttgtatgcaccatacacccccgtcacaaaggcg
ataatggaaaagtctaatgtaaccctcaggcagttggcagaattaagagaaaaatctcaa
gagtggatggataagtcaccgcttttcatgaattccttccaactgttaaaccagacgatt
ccaatgctccagaatactctaaggaatccctttgtgcaagtttttgtaaaattctccgtg
ggacttgatgctgttgaacttttgaaacagatagatgaactcgatattctaaggctgaaa
ttagagaacagcattgacctcattgatcaacttagcatactatcttccctgacagtgaat
atttcctcctgtgtattatatgaccgtattcaggcagcagaaagtgtagataaaatggaa
agagaggctaaaagactctacaaaagcaatgaactctttggaagtgttatttttaagctt
cctcctaatagcagccggcacagaagctatgactctgaaaacgtctctcttcctccagtt
gtaaaatacaccatccgcatgagtctcaagacctcacagaccacaagaaacattagagcc
aagatttgggccccagggccacacaattctccatcacacaaccagatctatggcagggct
tttgtctacttacaggatagtattgaaagagcaatcattgaattgcagactggaaggaac
tcccaggaaatagcagttcaggtccaagcaattccttatccctgctacatgaaagacaac
ttccttaccagtgtctcttactctcttccaatcgtgctcatggttgcctgggttgtattt
atagctgcatttgtaaaaaagcttgtttatgagaaagacctccggcttcatgagtacatg
aagatgatgggagtgaactcctgcagccactttttcgcctggctcatagagagtgttgca
tttttactgattaccatcggcatcctcatcatcatactcaagtttggcaatattcttcct
aaaacaaatgggttcattttgttcctgtatttttcggactacagcttctcggttatcgcc
atgagctatctgatcagtgccttcttcaacagcaccaacattgcagctctgatcggaagc
ctcatttacatcattgccttttttccatttattgttctgattacagttgaaaatgagttg
agctatgtaataaaagtattcatgagcctgctgtctccaacagctttcagttatgcaggt
cagtacattgcacgctacgaggagcaaggcatcggtcttcagtgggaaaatatgtacagt
tccccagttcaggatgacaccacttcatttggctggctgtgctgtctaatcctcgctgac
tctttcatttatttccttattgcttggtatgtccggaacgttttcccaggtacatatggt
atggcagctccgtggtattttccattccttccttcctattggaaagaacgattgggatgt
gcagaagtgaatcatgagaaaagcaatgggcttatgtttactaatatcatgatgcagaac
accaacccatctgccagtcctgaatacaaattttcctccaacattgagcctgaacctaaa
gatctcacagttggggttgctctgcatggggtcacaaagatctatggctcaaaaattgct
gttgataacctcaatctgaacttctatgaaggtcatattacttcattgctggggcccaat
ggagccgggaagactaccaccatctccatgttgactggactgtttggggcctcggcaggt
accatctttgtttacggaaaagatatcagaacagatctgcacgttgtgcggaagaacatg
ggcgtctgcatgcagcatgatgtcttgttcagttacctcaccaccaaggagcaccttctc
ctctacggctccattaaagttcctcactggactaaaaagcagctgcatgaagaagtgaaa
aggactttaaaagatactggactatatagccatcgtcataagagagttggaacactgtca
ggaggaatgaagaggaagttatccatatcaatagctctcatcggaggatcaagggtggta
attctggatgaaccatccactggcgttgacccatgttctcggcgaagtatatgggatgtt
atatccaagaacaaaactgccagaacaatcattctgtcgacacaccacttggatgaggct
gaagtgctgagtgaccgcattgccttcctggagcaaggagggctgcgctgctgcgggtca
ccgttttatctcaaggaggcatttggagatgggtatcacctcacactcaccaagaaaaag
agtccaaatctaaatgcaagtacagtgtgtgacaccacagctgtgacggcaatgatccag
tcacatctccctgacgcctacctcaaggaggacatcgggggagaacttgtctacgtgctt
cctccatttagcaccaaagtttcaggggcctatctttcactcctgagagccctggacagt
ggcctgggtgacctcaacattgggtgctatggcatttcagataccaccgtggaagaggtc
tttctgaacttgactaaagagtcacaaaaaaataataggagtcttgagcacttaacaaca
aagaaaatcggaagttccagtaccaatggcatctcaacccctgatgatttatctgtgagc
agcagcaatttcacagacagagatgacaaaatcctgaccagaggagagagatcggttggt
tttgaactgttattgaagaagattatggctattctcattaagaggttccatcacacccgc
cggaactggaagggcttcatagcacaggttattctccccattgtctttgtaacaactgcc
atgggcctcggcacgctgagaagttccagcagcagttatccagagctcgaaatcacccca
tctctttatggtacctcggaacagacaacattctatgcaaattatcacccaagcacaaaa
gacctggtctcagcaatgtggagcttccctggcattgacaacatgtgtttgaatatcagt
gatccgaggtgtttaaacaaaaacagtctgggaaaatgggacagcagtggagaagaacct
atcactaattttggcgtttgctcctgctcagaaaacacccaggaatgtcctaaatttaac
tattcaccacctcatagaagaacttattcttcccaagtaatttataacctcactgggcac
cacttggaaaattatcttatatcaactgctaatgagtttacacaaaaaagatatggaggt
tggagtttgggactgcctttgactaaagaccttctttttgatgtaacgactgttccagct
aatagaacgcttgccaaggtatggtatgatccagaaggctatcactcccttccagcttac
ctcaacagcctgaataatttcctcctgcgagttaacatgtcaaaatatgatgctgcccga
catggtatcatcatgtatagccatccttatccaggagtgcaagatcaagaacaagccaca
atgagcagcttgatcgatattttagtggcactctccatcttgatgggctactctgtcacc
actgccagctttgtcacctacgttgtacgggagcatcagacaaaagccaagcagctgcaa
cacatttcaggcatcagtgtcacctgctactgggtaaccaacttcatttatgacatggcc
ttctacttggtgcctgtagcattttcaattggtgtcattacaattttcaagttacctgcc
ttctacagtgaaaacaacctaagtgctgtatctctcctgcttctgctgtttgggtatgcc
acattttcttggatgtacttgctggctgggttcttccatgatacaggaatggctttcatc
acttacgtctgcatcaaccttttttttggcatcaattccattgtttccctgtcggtggtg
tactttctttccaaggaaaagcctaatgatgcgactttagaacttatttctgaaaccctc
aagcgcattttcctgattttcccacaattctgttttggctatggtttgatcgaactttct
caacaacagtcggtcctggacttcttaaaagcatatggagtggagtatccaagtgaaacc
tttgagatggataaactaggcgcaatgtttgtggccttagtttctcagggaaccatgttc
tttttcttgcgacttttaatcaatgagtggctaataaataaactcagactcttctttaga
aaatttagctcttcatctgttattgagacaatagatgaagatgaagatgtgcaggctgaa
agatttcgagttgagaaaggtgcaaatgattatgacctagtccaactccatcgtctcaca
aagacttaccaacttatccacaaaaagattatagctgtaaacaacatcagcattgggatt
cctgctggggagtgctttggacttcttggggtgaacggagcaggaaaaaccactatcttc
aagatgctgacaggagacataattcctacaagtggaaacattctgatcagaaataagact
gggtctctggctcatgttaactctcacagctcattagttggctactgtcctcaggaagat
gctttggatgacctggtaaccatagaagaacatttatatttctatgctagagtacatgga
attccagaaaaagatattaaagaaactgttcaaaaactccttgggagacttcacctgatg
ccctacagggacaaagttacctctatgtgtagttacggcacaaaaagaaaattgtctact
gcactggccttgatagggaaaccttccattctgttgctggatgagccaagctctgggatg
gatcctaagtcaaaacggcacctctggaagatcatttcagaagaagtccagaataaatgt
tctgtcatcctcacttctcacagcatggaagaatgtgaggctctctgtacaaggttggcc
attatggtgaatggaaggttccaatgtattggatcattgcagcacattaagagcaggttt
gggcgaggatttactgtcaaggttcacgtgaagaatgccagagtgagcatggaggccctc
acaaggttcatgcagctgcactttccaaaaacatacttaaaagatcagcacctcagcatg
ttagaatatcatgtgccagtcactgcaggaggagtagcaaatatttttgatctgctggag
gccaacaagactgctttaaatatcacaaatttcttagtgagtcagactactctggaagag
gttttcatcaactttgccaaagaccaaaagtgctatgaaactgccgacaccagcagccaa
ggatccactgtgagcactgactcccaagaggaccagctgtag
DBGET
integrated database retrieval system
