Bos taurus (cow): 523526
Help
Entry
523526 CDS
T01008
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X3
KO
K06237
collagen type IV alpha
Organism
bta
Bos taurus (cow)
Pathway
bta04151
PI3K-Akt signaling pathway
bta04382
Cornified envelope formation
bta04510
Focal adhesion
bta04512
ECM-receptor interaction
bta04518
Integrin signaling
bta04820
Cytoskeleton in muscle cells
bta04926
Relaxin signaling pathway
bta04933
AGE-RAGE signaling pathway in diabetic complications
bta04974
Protein digestion and absorption
bta05146
Amoebiasis
bta05165
Human papillomavirus infection
bta05200
Pathways in cancer
bta05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
523526 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
523526 (COL4A6)
04518 Integrin signaling
523526 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
523526 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
523526 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
523526 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
523526 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
523526 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
523526 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
523526 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
523526 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
523526 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
523526 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bta04147
]
523526 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
bta00536
]
523526 (COL4A6)
Exosome [BR:
bta04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
523526 (COL4A6)
Glycosaminoglycan binding proteins [BR:
bta00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
523526 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
523526
NCBI-ProteinID:
XP_002699932
BGD-bta:
BT12346
Ensembl:
ENSBTAG00000013760
VGNC:
27567
UniProt:
A0A3Q1M1R0
LinkDB
All DBs
Position
X:complement(56802025..57140032)
Genome browser
AA seq
1688 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKPYGKPCGGQDCSGGCKCSPEKGARGRPGPIGIQGP
TGPQGLPGPSGLSGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYSGLPGPPGLPGQKGSKGEPVLAQGSFKGMKGESGLPGLD
GITGPQGAPGSPGAVGPRGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPQGFPGVSGPPGLPGFGIAGEKGEKGIPGLPGPRG
PMGLEGVQGPPGSQGRKGSSGFPGLNGFPGIKGEKGGIGLPGPDIFIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGLPGPPGAPGLPALPGGPGALGPQGALGLKGERGNTGRTTTGAA
GLPGRDGLPGLPGLPGPPGAASETGTLQSTEPGSPGLRGERGPKGHPGLKGIKGDPGFCA
CDGGVPNMGPPGEPGLPGPPGLLGLPGLKGTKGDPGSGGAQGPSGDPGVFGPRGPTGPKG
KKGDPTLSTRSGMPGEQGDPGPQGLPGETGAPGKDGIPGLPGLPGLLGDGAQGFPGEKGL
PGLPGEKGHTGPTGPPGIGLPGAPGPRGLPGDKGVDGLPGQPGPRGVPGITLPCIIPGPY
GPSGLPGAPGFPGPKGARGLPGAPGQPGLRGNKGDPGSPGLVHLPELPGFPGPHGEKGLP
GFPGLPGKDGLPGKVGSPGLPGPKGAPGDILGAENGAPGEQGLQGLPGDRGFPGDSGLPG
LKGLLGKSGLLGPKGERGSPGIPGRVGQPGPPGPSGLFGIKGKPGLRGPPGFPGISGYPG
KKGPRGEIGLPASAGKRGLPGLKGLPGLPGPIGFLGNSGLPGATGLPGLPGLKGEKGSVG
LTGFPGIPGLPGIPGASGLKGIPGSTGRVGPSGWAGSPGEKGDRGDPGPFGIPSHRPPML
NLRFKGDKGSQGSPGAIGFPGPRGDKGEAGHPGPPGLPGAPGFPSLIKGLSGRPGPPGST
GLRGLPGLKGYPGIAGFQGIPGESGSQGLSGVPGLPGASGLPGLKGDQGQTLGISGSPGP
KGQPGESGFKGVKGKDGPVGDVGFPGNKGEDGKVGISGDVGLPGSLGLPGVAGMRGNPGL
PGSPGHPGATGPLGPPGLIGTKGFPGLPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLP
GPKGEKGSPGIGIGAPGKPGIRGPKGSQGFPGLQGAAGLPGALGLSLPSVIEGQPGDPGR
PGLDGERGRPGPPGPPGPPGPASDQGDPGDPGFPGIPGPQGPKGDQGIPGFSGLPGELGL
KGMRGEPGFMGTPGKVGPPGDPGLPGMKGKAGPRGLSGPRGAPGHTPIAEAIQAPPGPMG
LPGIDGIPGLMGDPGVQGPVGLQGSKGLPGIPGKDGASGLPGPPGALGDPGLPGLQGPPG
FEGAPGKPGPFGRAGVPGQSLRVGYTLVKHSQSEQVPLCPSGMSQLWVGYSLLFVEGQEK
AHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQIPQ
YISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGS
CLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGEEPVSETLKAGQLHTRVSR
CQVCMKSV
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgcttctggttactttgtgcctgaccgaggaactggcagga
gcgggagagaagaagccctatgggaagccatgtgggggccaagactgcagtgggggctgt
aagtgctctcctgagaaaggagccagagggagaccaggaccaattggaattcaaggtcca
acaggtcctcaaggacttcctggccctagtggtttatcagggttaaaaggagaaaggggc
tccccaggcccgctgggaccgtatggaccaaaaggcgataagggtcccatgggtgttccc
ggctttcttggcatcaatggaattccaggccaccctggacagccaggacccagaggccca
cctggcctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
tattctgggcttcctggaccacctgggcttcctggtcagaaaggctctaaaggtgaacct
gtccttgcccaaggtagtttcaaaggaatgaagggggagtctgggctgcccggactggat
ggaatcactggcccacaaggagcacccggatctccaggagctgtaggacccagaggacca
ccaggattgcaaggtcctcctggcccccctggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggagatgttggcctgcctggtcctgcagga
cccccaccatctactggagaactggaattcatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcctcagggcttcccaggagtaagtggtccacctggtctgccggga
tttggaattgctggagaaaaaggagaaaagggaattcctggtttgccaggacctaggggt
cccatgggtttagaaggagtccaaggccctccggggagtcagggcaggaaggggtcttca
ggtttccccgggcttaatggattcccaggaattaagggtgaaaaaggtggcattggcctg
ccaggcccagatattttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cctggtatgccaggcctcccaggccttaaaggagatgaaggcatacagggcctacctggc
cctcctggcgcccctggattaccagctttaccaggtggccccggtgctctggggccccag
ggagctctaggcctgaagggggaacgaggaaacactggccggaccacaacgggggcagct
ggtctccctggcagagatggtttgccaggcctgccaggcctaccaggcccacctggtgca
gcatctgagacgggaaccctacagagcacagaaccgggatcgccgggactccgaggggaa
cgaggtccaaaaggacacccaggcctcaaaggaattaaaggggacccaggtttttgtgct
tgtgatggtggtgtccccaacatggggccacctggggagccaggcctgcctgggccacca
ggacttctgggccttccaggtcttaaaggaaccaaaggtgatccaggctctgggggtgca
cagggcccatcaggggatccaggtgtatttgggcctcgaggtccaacaggccctaaagga
aagaaaggggacccaactctcagcacaagatcagggatgccaggagagcaaggtgatcct
ggcccccaggggctccctggtgagacaggagccccaggcaaggatggaataccaggttta
ccagggctgccaggccttctgggtgatggtgcacagggcttccccggtgaaaaggggtta
ccaggacttcctggtgaaaaaggccacactggtccaactggccccccaggaattgggcta
ccaggggctcctggacctcgtggacttcctggagataaaggagtagatggattaccaggg
caaccaggcccccgtggagttccaggtatcaccttgccttgtattattcctggaccgtat
ggtccatcaggactcccaggagctcccggattcccaggccctaaaggggcccgtggcctc
cctggggctccaggccaacctggattgcgtggaaataaaggggaccccggaagtccagga
ttggttcacctgcctgaattgccagggtttcctggacctcatggagagaagggcttacct
gggtttcctgggctccctggaaaagacggcttgcctgggaaagttggcagccccggctta
ccaggtcccaagggagcccctggtgacatccttggtgctgaaaatggtgctccgggggag
caaggcctacagggactgcctggggacagaggatttcctggagactctggccttccagga
ctcaagggtttgcttgggaagtcgggcttgctcggccccaaaggtgagcggggcagccct
ggaataccaggccgtgtgggtcagccaggacccccaggccctagtggtctatttggcatc
aagggcaaacccgggctccgcggacccccaggctttccaggcatttcaggatatcctgga
aagaaaggtccaagaggcgagataggtctccctgcgtcagctggaaagagaggcctgcct
gggctgaaagggcttccgggactgccagggccaattggcttcctggggaactcaggcttg
ccaggggccactgggttaccaggcctgccaggtctgaagggtgagaaggggtctgttgga
ctgacaggttttccagggattccaggtctccctggtattcctggagcaagtggattaaag
ggaattcctgggtcgacaggaagagtggggccatctggatgggctggtagccctggtgaa
aaaggagacagaggtgacccaggcccctttgggatacccagtcatcgacctccaatgctg
aacctccgcttcaaaggagacaaaggttctcagggctcacctggagccattggatttcct
ggacccagaggtgacaaaggagaggctggccaccccgggccaccaggcttgcctggagct
cctggcttccccagcctcatcaagggacttagtgggagaccaggcccccctggctccaca
ggactacggggcttacctggcctgaaggggtaccctggaattgcaggtttccaaggaatt
ccaggagaaagtggttcacagggtctcagtggagttcccgggctaccaggagcatctggt
ctcccaggtttaaaaggagatcaaggccagacacttggaatttctggtagcccaggaccc
aagggacaacctggggagtctggtttcaaaggtgtgaaaggaaaagacggaccagttggt
gatgtgggtttcccaggaaacaaaggtgaagatgggaaagttggtatttctggagatgtt
ggccttcctggctccctaggactccccggagttgcaggcatgagaggaaatccagggctt
ccaggttctccaggccacccaggggcaactgggcccctgggtccccctggcctaatagga
accaaaggtttccctggacttccaggtttacatggactgaatgggcttccaggaaccaag
gggactcatggaactccaggacctagtataaccggtgtgcctgggccagctggcttgcct
ggtcccaaaggggaaaaaggttctccaggaattggcatcggagccccaggaaagccaggt
ataagaggacccaaaggtagtcaaggttttccaggtctccagggcgccgctggtctcccc
ggtgcactgggcctctccttgccttcagtcatagaaggacagcctggtgaccctgggcga
ccaggtctagatggagaacgaggccgcccaggccctcctgggcccccaggcccccctggg
cctgcctcagatcaaggcgaccctggagaccctggcttccctggaattcctggccctcaa
gggcccaaaggagaccaaggaattccaggtttctctggcctccctggagagctaggattg
aaaggcatgagaggtgagcctggcttcatggggactccaggcaaggttggaccacctgga
gacccaggacttcccgggatgaaggggaaggcggggccaagaggcttatctggccctcga
ggtgctcctggacacacacccattgcagaagccatccaggctccccctggacccatgggt
cttccaggcattgatggaatccctggcctcatgggagaccctggggtccaaggacctgtg
ggcctacaaggatctaaaggtttacctggcatccctggcaaagatggcgccagtggactc
cctggcccacctggggctcttggtgatcctggtctccctggactacaaggccctccagga
tttgaaggagctccagggaagccgggccccttcgggagggctggagtgcctggacagagc
ctgagagtgggctacaccttggtgaagcacagccagtcagaacaggtgcccctgtgcccc
agcgggatgagccagctctgggtgggttacagcctgctgttcgtggaggggcaagagaaa
gcccacaaccaggacctggggtttgctggctcctgcctgccccgcttcagcaccatgcca
ttcatctactgcaacatcaatgaagtgtgccactatgcccgacggaatgataagtcctac
tggctctccaccaccgcccccatccctatgatgccggtcggccagacacagatcccccag
tacatcagccgctgctctgtgtgtgaggcgccctcgcaagccattgctgtgcacagccag
gacatcaccatcccacagtgccccctgggctggcgcagtctgtggattgggtactccttc
ctcatgcacacagccgccggtgcagagggcgggggccagtccctggtctctcccggatcc
tgcctagaggatttccgggctactcctttcatcgaatgcagtggtgcccggggcacctgc
cactactttgccaacaaatatagtttctggctgacaacagtggaagagaggcagcagttt
ggggaggagcctgtatctgagacgctgaaagctggacagctccacacccgagtcagccgc
tgccaggtgtgtatgaaaagcgtgtag
DBGET
integrated database retrieval system
