Bos taurus (cow): 524776
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Entry
524776 CDS
T01008
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
524776 (CHD6)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
524776 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
524776
NCBI-ProteinID:
NP_001230229
Ensembl:
ENSBTAG00000005733
VGNC:
27281
UniProt:
F1N734
A0JNP6
LinkDB
All DBs
Position
13:complement(70030877..70232258)
Genome browser
AA seq
2721 aa
AA seq
DB search
MIMKIQKKEKQLSSLKVPNHSPMSDASVNFDYTSPSPFDHSTDQEEKIEDVASHCPAPKE
LYDVEEEAGPLFPRKTASHNGMEDSGGGGTGVKKKRKKKDPGEHEGAAKGSKDREPKPKR
KREPRELKEPRKAKEPRKAKEPREPKQKDGTKKTRKPREASGPREAKEKRGGPDAAARTK
SRKASKEQGPTPVEKKKKGKRKSETAVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLSKGANQHNMPNLINTMMELRKCCNHPYLISGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKSEKESLVLDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLL
SAEQGVTDGASDVPERGHTDKEDNTEDKVDGLQKQMESSSDGGDGLFAEKKDDTRAAQDG
SDPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEVLGLGNQSYWVQEEMFRRSSEME
LINKEAQKRWTRREQADFYRTVSSFGVVYDQEKKTFDWTQFRVISRLDKKSDESLEHYFY
SFVSMCRSVCRLPAWKDGGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLTCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYVMTDPQLSFLDAYRNYAQHKR
PDPQAPESLCCLYQTNSKLYESLAYTHMSRTSESLENEPENLMKIEAGDDHLGPPRGSLS
DMTCESFISKTQDVLSLTHDESLLPGSLETMRYGKKALSQEPGPFQGSTGASTESRQDTA
AISAGRDGNCQPRGHEAKIASDPSFMETLEAGVAQMNIKNEKHLLISLSKEGELGCSEAG
PRPERIGQLDPNCFASPSLDPGNESGFVDMCNLSVCDSRRNVSSDQQLIDLLESKSLESK
LVLGPNHSDEEDDEDENEEESLELAAGRRERLAASPLSEPTTRMAGEQSLAGFLTEEAKK
GSTEARSQPPGPQGPFLPTACQCHCKHVERWARGLEKDEFEVEKPQAYPPDPFTSKANNV
TVRGEPTAVPPELLQVKQELLKEPWKESTEGNQGLPPYPEGSELKPEDMDYESKEELDKD
GNCQSQDYPGKYSEEESKSSTSGITGDLGDDLQEARAPTIAQLLQEKTLYSFSEWPKDRV
IISRLDNICHVVLKGKWPSSQQHEPSGTLPTPVLTSSTGPRGGISEPEASEHSSSSGAAW
VAQMQKESFLAPVFTKDEQKHRHPYEFEVERDAKTRSLEQFSASHGHPPIVLNGWHGESA
IDLSCPSEGSPGATSPFPVSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGS
LRRDDAASRRRRGRRKHVDGGVDLIFLKEQTLQAGILEVHEDPGQAPLSTPHPPEGPVPA
TSTPEPTPAAGSPAEKAIPSKSLLDWLRQQADCSLEVPGFGANFSDKPKQRRPRCKEPGT
LDVTSLSGEERVPAVPKEPGLRGFLPENKFNHTLPEPVLRDAGPRRRGRRPRSELLKTPA
LVADAPSGMGPLFMNGLIAGMDLVGLQNMRNMPGIPLTGLVGFPAGFAAMPPGEEVKSTL
SMLPMVLPGMAAVPQMFGVGGLLNTPMATTCASAVPAPLSSTTKGGVSAAEKTAEDQPGS
HNVKTDPSAEDKPGPSPFSSDQPEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGM
ALPAMQQARHSEAAGLESQRRKRKKTKGDAPNPNPEPVPGLEREPGSEQSCPEPRAPAPP
DREHAAQAREGGPQDSHGDTN
NT seq
8166 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagagaagcagttgtcaagtctaaaagttccaaatcac
tccccaatgtctgatgcctctgtcaattttgactatacatccccctccccatttgaccac
agcactgaccaggaggagaaaatcgaagatgttgccagtcactgtccagccccaaaggag
ctgtacgacgttgaagaggaggctgggccccttttccccagaaaaacggcgtcccataac
ggtatggaggacagtggtggaggaggcacgggcgtgaagaagaaacgcaagaaaaaggat
ccaggggagcacgaaggggcagcaaagggaagcaaggacagggagcctaagccaaagagg
aagcgtgagcccagagagctgaaggagcccaggaaggccaaggagcccaggaaggccaag
gagcccagggagcccaagcagaaggacggcaccaagaagacgcggaagccccgcgaggcc
tcgggccccagggaggccaaagagaagaggggcggccctgacgctgcagccaggaccaag
tccaggaaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaaa
aggaaaagtgaaaccgcagtggagagtttagagctggaccagggcctgccgaacccatcc
ctgcggagccccgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caagtgaagcgcagaaaatacaacgaagacctggacttcaaggtggtggacgatgacggg
gagaccattgccgtgcttggggccggccggacgtccgccctctcagcttcgaccctggcc
tggcaggcggaggagcctccagaagatgacgcaaacatcattgagaagatcctggcatct
aagactgtccaggaggtccacccgggagaacccccattcgacctggagctgttctacgtc
aagtatagaaatttttcctacttacactgtaaatgggccacaatggaagaactcgaaaag
gaccctcgcatcgcacagaagatcaagcgatttaggaataagcaagcccagatgaagcac
atttttactgagcctgacgaagacttgttcaacccagactatgtggaggtcgatcgcatc
ttagaggtggcccataccaaggatgcagaaaccggagaggaggtgacgcattacctggtg
aagtggtgctcactgccctacgaagagagcacttgggaactggaggaggacgtggatcct
gccaaagttaaagaattcgaatctctgcaagtgctccccgaaatcaagcacgtggagcga
cccgcttcagactcctggcagaaacttgagaagtcgcgagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aactgcattttggccgatgagatgggcctagggaaaaccatccagtccatcacgttcctt
tcagaaatattcctcaggggcatccacggccctttcctcatcatcgccccactctccacc
atcaccaactgggagcgggagttccgaacgtggacagaaatgaatgccatcgtgtaccac
ggcagccagatcagcaggcagatgatccagcagtacgagatggtgtacagagatgcacag
ggaaaccccctgtcaggtgtcttcaagttccatgttgtcattacaacatttgagatgatc
ctggcagactgcccagagctgaagaagattcactggagctgtgtgatcatcgatgaagcc
cacaggttgaagaacaggaactgcaagcttctggagggcctgaagctcatggccctggag
cataaggtgctgctcacggggacacccttgcagaactcggtggaggagctcttcagtctg
ctcaacttcctggagccatcacagttcccttcagagactgctttcttggaggagtttgga
gatctgaagacagaggagcaggtgaagaaactgcagtctatcctcaaaccgatgatgctt
cggcggctaaaagatgacgtggaaaagaacctcgctcccaagcaagagacaatcatcgaa
gtagagctgaccaatatccagaagaagtactaccgagccatcctggagaagaacttttcc
ttcctgagcaagggggccaaccagcacaacatgcccaacctcatcaacaccatgatggag
ctgaggaagtgctgcaaccatccctacctgatcagcggggcagaggagaaaattctggag
gacttccggaaaacccacagccccgatgccccggactttcagctgcaggccatgatccag
gccgcagggaagctggtgctgattgataaactgctccctaagctgatcgctggcggccac
aaagtgctcatcttctcgcagatggtgcgctgtctcgacatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcacgcga
gcgggaggcctggggatcaatctcacagctgccgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccggtgtcaccggataggccagagtaaa
gccgtgaaggtgtatcgcctcatcacgcggaattcctacgagcgggaaatgttcgacaag
gccagcctgaagctgggcctggacaaggccgtccttcaggacatcaaccggaagggcagc
acgaatggcgtacagcagctctcaaagatggaggtagaggacttgctccggaaaggtgcc
tacggcgccttgatggatgaagaggacgaaggctccaagttctgtgaagaagacatagac
cagatcctgcagaggaggacacataccatcaccatccagtctgaggggaaaggatccact
ttcgccaaggctagctttgtggcttcaggaaacagaacggatatttccttagatgaccca
aacttttggcagaagtgggctaaaatagctgaactggacactgaagcaaagagtgagaag
gagagcctggtgctcgaccgcccgcgcgtgcggaagcagaccaaacactacaactctttc
gaggaggacgagctcatggagttttcggagctggacagcgactctgacgagaggcccaca
aggtcccggcgcctcaatgacaaaaccaggcgctacctccgggccgagtgcttccgggtg
gagaagaacctgctcatcttcggctggggccggtggaaggacatcctgacgcacgggcgg
ttcaagtggcatctgaacgagaaggacatggagatgatctgccgggccctgctggtgtac
tgcgtcaagcactacaaaggggacgagaagatcaagagcttcatctgggagctgatcacg
cccaccaaagacggacaggcccagacactccagaaccactcaggcttgtccgctccagtc
cccagagggaggaaggggaagaagacgaagaaccagctgctgctcccggagttaaagaac
gcagactggctggccacctgcaaccccgaggtggtcttacatgacgatggctacaagaag
cacctcaaacagcactgcaacaaggtacttctgcgagtccggatgctgtactacctaaaa
gctgaaatactgggagaagcagctgataaagcatttgaaggaactccagccagggaactg
gacgtgccccttcctgacatcgactacgtggagatcccggtggactggtgggacgctgag
gccgacaagtccctcctgattggtgtgttcaaacacggttacgagaggtacaacgccatg
cgagccgacccagcactttgcttcctggagaaagtgggcatgccagacgagaagttgctt
tctgcagagcagggtgtcacagacggggcctcagacgtccccgaaagaggccacacagat
aaagaagacaatacagaagacaaagtagacggcctccagaaacaaatggagagttccagt
gatggaggtgatggcctttttgctgaaaagaaggatgacacccgggcagcccaggatggc
tccgacccagacaaatcaccctggcctgtttcatccgcactcactgctcgtctccgacgc
ctggtcaccatttaccagcgctgtaaccgcaaggagctctgccggcctgaagtcctggga
ctaggaaaccagagctactgggtccaggaagagatgttccggaggtcctcagagatggag
ctcatcaacaaggaagcccaaaagaggtggacaaggagggagcaagccgacttctacaga
acagtgtcttcctttggtgtcgtttatgatcaagagaagaaaacctttgactggacacag
tttcgcgtcatttcccgtctggacaagaagtcggacgagagcctggaacactatttctat
agcttcgtgtccatgtgccgcagtgtctgtcgtctgccagcctggaaggatggtggcccc
ccggatcccagcatctacgtggaacccatcactgaagagcgggccgcgagaacgctgtac
cgcatcgagctgttgcggaaggtgcgggagcaggtgctcacgtgtcctcagctgcacgag
cgcctgcagctctgcaggcccagcctgtacctgcccgtctggtgggagtgtgggaagcac
gaccgcgacctgctgatcggcaccgccaagcacggcctgaaccgcaccgactactacgtc
atgaccgacccccagctgtccttcctggatgcctacaggaactacgcccagcacaaaaga
cccgacccccaggccccagagagtctctgttgcctctaccagaccaactccaaactgtat
gagtctctggcctatacgcacatgagccggacttccgagtcccttgaaaacgaacccgag
aacctcatgaaaatcgaagctggagatgatcaccttggtccgcccaggggcagcttatct
gacatgacctgtgaaagcttcatctctaaaactcaagatgtcctttcccttacccatgac
gagagtctgctgcctgggtccttggagaccatgaggtacgggaagaaggcgctaagccag
gagccaggcccttttcagggcagcacgggtgccagtactgagtccaggcaagacaccgcg
gccatctccgcaggcagagacggaaactgccagccccggggccacgaggcaaaaatagcc
tcagacccctcttttatggaaactttagaagcaggagtagctcagatgaacattaaaaat
gagaaacacctgttgatatctctttcaaaggaaggggaactcggctgcagcgaggcagga
ccaagacctgagagaatcgggcagctggaccccaactgctttgcctccccttccttggac
ccagggaatgagagcgggttcgttgacatgtgcaacctgagtgtctgtgactccagaaga
aacgtgtcatcagaccagcagctaatcgacttactagaaagcaaaagcttagaaagcaaa
ttggttttgggtccgaaccacagcgacgaggaggacgacgaggacgaaaacgaggaggaa
agtctcgagctggccgcaggcaggcgggaaaggctggcagcgtcgcctctcagcgagccc
accacccgcatggcaggggagcagagcctggccggcttcctcacagaggaagccaagaaa
gggagcacggaggccagaagccagcctcctggaccacagggccctttccttcccacagcc
tgtcagtgtcactgcaaacacgtggagaggtgggcacgcggcctcgagaaggacgagttt
gaagtggagaaaccccaggcttaccccccagaccccttcacaagcaaagccaataatgtc
acagtgaggggcgagcccactgctgtcccacctgagctgctccaggtgaagcaggaactg
ctgaaggaaccctggaaagagagcacagaagggaaccaaggtctccctccgtatcctgaa
gggagtgagctcaagccggaagacatggattatgagagtaaagaggagttggataaagac
gggaactgccagagtcaagattatccagggaagtactctgaggaggagagcaagagctcg
acctcgggcatcacgggagacctcggggacgacctgcaagaggcgcgggctcccaccatt
gctcagctgctccaggagaaaacgctgtattcattctccgagtggccgaaggatcgcgtg
ataatcagccgcctagataacatctgtcacgtggtgttaaaggggaagtggccctccagc
cagcagcacgagccctcgggcacgctgcccacccccgtgctaaccagcagcactggtccc
cgaggcggcatctcagagccggaggcatcagagcacagctccagcagtggtgcagcgtgg
gtggcccagatgcagaaggagagcttcttggctccggttttcacaaaggatgaacagaag
cacaggcatccttacgagttcgaggtagagagggatgcgaagacccggagcctggagcag
ttctcagcctcccacgggcacccccccatcgtcctcaatggctggcatggagagtcagcc
atagacctctcctgcccatcggaggggtccccaggggccacgtcccctttcccagtgagc
gccagcacccccaagatcggggctattggttcactgcaaggagcccttggcatggacttg
tcggggatcctgcaagctggcctgatccacccagtgaccggacagattgtcaacggaagc
ctcaggagagatgacgctgcctccaggaggcggagaggaaggcggaaacatgtcgacggc
ggggtggacctcatcttcctgaaggagcagaccctgcaggcgggcatcttggaagtccac
gaagacccaggacaggcccccctgagcaccccacaccctcctgaagggccggtgcccgcc
acgtcaaccccggagccgaccccggccgctggcagcccggccgagaaagccattcccagc
aagagcctgctggactggctgcggcagcaggccgactgctccctcgaggtcccgggcttc
ggcgcgaatttttcagacaaaccaaagcagaggaggccacgctgtaaggaacctggaacg
ttagacgtcacctctctgagtggggaagagagggttcctgctgtccccaaggagcccggc
ctgagggggtttctcccagaaaacaagttcaatcacaccctgcccgagcccgttctccga
gacgcaggcccccgccgcaggggcaggcggccacggagtgagctgctgaagaccccggcc
ctggtggcggacgccccctccgggatggggccgctgttcatgaacggcctgatcgccggg
atggacctggtcgggctgcagaacatgagaaacatgccgggtatccccctcacggggctg
gtgggcttcccagccggcttcgcggcaatgcccccaggcgaggaggtcaagagcacgttg
agcatgctgcccatggtgctgccgggcatggccgccgtgccccagatgttcggggtcggg
gggctcctcaacacccccatggccaccacctgcgcctcggccgtgccagcgcccctgtca
agcacaaccaagggtggcgtgtcggcggccgaaaagactgcggaagaccagcccggcagc
cacaacgtcaaaacggacccgtcggccgaagacaagcccggccctagccccttttcctcc
gaccagcctgagcccgcaataactacgagcagccccgtggcgtttaacccgttcctcatc
ccaggtgtttcccccggactcatctacccttccatgttcctctcccccggcatgggcatg
gcgctgccggccatgcagcaggccagacactcggaagcagcaggtctggagagccagagg
aggaagcggaagaagaccaagggggacgccccgaaccccaacccagagcctgtgcccggg
ctggagagggagccgggcagcgagcagagctgcccagagcccagggcccccgcgcccccc
gacagagaacacgcagcacaggcccgggaagggggcccccaggactctcacggtgacacc
aattag
DBGET
integrated database retrieval system
