Bos taurus (cow): 526104
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Entry
526104 CDS
T01008
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4 isoform X1
KO
K15615
homeobox protein SIX4
Organism
bta
Bos taurus (cow)
Pathway
bta05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
526104 (SIX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
526104 (SIX4)
Transcription factors [BR:
bta03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
526104 (SIX4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
526104
NCBI-ProteinID:
XP_024853845
BGD-bta:
BT25833
Ensembl:
ENSBTAG00000049091
VGNC:
109396
UniProt:
A0A3Q1M669
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Position
10
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AA seq
786 aa
AA seq
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MSSSSPTGQIASAADIKQENGMESASEGQEAPREVAGGAAAAAGLSPPAPAPFPLEPGDA
AAAAARVSGEEGAVAAVAAAAGAAVDQVQLHSELLGRHHHAAAAAAQTPLAFSPDHVACV
CEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFES
ANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRN
ALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPST
EDESSKGHEDLSPHQLSGSSDGVTNLSLSSHLEPVYMQQIGNAKISLSSSGVLLNGSLVP
ASTSPVFLNGNSFIQGPNGVILNGLSVGNTQTVSLNPPKMASNIMSNGISMTDILGSTSQ
DVKEFKVLQSSSANSAATTSYSPSAPVSFPGLIPSAEVKRESIQTVASQDGGSVVTFTTP
VQINQYGIVQIPNSGANSQFLNGSIGFSPLQLPPVSVAASQGNISVNSSTSDGSTFTSES
ATVQQGKVFLSSLAPSAVVYTVPNSGQTIGSVKQEGVERSLVFSQLMPVNQNAQVNANLS
SESISGSGLHPLSSSLVNVSPTHNFSLTSPTLLNPTELNPDIADSQPMSAPVASKSTVTS
VNNTNYAALQNCSLISGQDLLSVPMTQAALGEIVPTGEDQVGHPSPTVHQDFVREHHLVM
QPVANIKENFLTNSESKTTSNLMMLDSKSKYVLDSMVETVCEDLETDKKELAKLQTVQLD
EDMQDL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcccccaccgggcagattgcaagtgcggcggacatcaagcaggagaat
gggatggaaagcgcctcggaggggcaggaggcgccccgagaagtggcggggggcgcggcg
gcggcggcggggctgagccccccggctccagcccctttccccctggagccgggggacgcc
gcggctgccgccgccagggtgagcggagaggaaggggcagtggctgcagtggcggcggcg
gccggggcggcggtggatcaggtacaactccactcggaacttctgggcaggcaccaccac
gccgcggccgccgccgcgcagaccccactggccttctcgccagaccatgtcgcctgcgtg
tgcgaggcgctgcagcaggggggcaacctggaccgcctggcccggttcctgtggtccctg
ccccagagcgacctgctacgtggcaacgagagcctgctgaaggcgcgagcgctggtggcc
ttccaccagggcatctaccccgagctctacagcatcctcgagagccacagcttcgagtcg
gctaaccacccgctgctgcagcagctctggtacaaggcacgctacaccgaggccgagcga
gcccgcggccggccgctgggcgcggtggacaagtaccggctacgcaggaaattccccctg
ccccgcaccatctgggacggcgaggagacggtgtattgtttcaaggagaagtcgcgcaac
gcgctcaaggagctctacaagcagaatcgctacccttcgccggccgagaagcggcacctg
gccaagatcaccggcctctccctcacccaggtcagcaactggttcaagaaccgccggcag
cgcgatcggaacccctccgagacccagtccaaaagtgagtcagatggcaatcctagcact
gaagatgaatccagcaagggtcatgaagacttgtctcctcatcaactctccggttcatcc
gatggtgtcaccaacctcagcctttccagtcacctggagccagtatatatgcaacaaatt
ggaaatgctaaaatatcgttaagctcctctggagttttattgaacggaagtttggtacct
gcaagtacttcacctgtcttccttaatggtaattctttcattcagggacccaatggagtt
atccttaatggattaagtgtgggaaatacacagacagtatctttgaacccaccaaaaatg
gcatcaaacattatgagcaatggtatatccatgactgacatactggggtctacctcccag
gacgtgaaggaattcaaagttctccagagctcttcagctaactcagcagccaccacctcc
tatagccccagtgctcccgtgtcgttcccagggctgatacccagtgccgaggtgaaaaga
gaaagtattcaaacagtggcttcccaggatggaggctctgtggtgacttttaccacacca
gtgcaaattaaccagtatggcatcgtccagatccccaattctggagcaaacagccagttc
cttaatggaagcattggattctctccactgcagctgcctcctgtttcagtggcagcttca
caaggtaatatttcagtaaattcaagcacttcagatgggagcacatttacaagtgagtct
gccacagtccaacaaggaaaggttttcttgagctctcttgctcccagtgcagtggtatac
actgttcctaattcaggccagactataggatctgttaaacaggagggcgtggagaggagc
ctggtgttttctcagttgatgcctgtcaatcagaatgcacaagtaaatgcaaacctatct
tctgaaagtatctccggaagtggcctccacccactgtcctcctcattagttaatgtatcc
ccaactcacaacttctccctgacttccccaaccctactaaatcccactgagctaaaccct
gacattgctgatagccagccaatgtctgcacctgtggcaagcaaatctactgtgacgtca
gtcaacaacactaactatgcagctcttcagaactgctcccttatttctggtcaagatcta
ctatcagtacccatgacccaggctgcccttggggaaatagttcccacaggtgaagaccag
gtgggtcacccctccccaacagtacaccaggattttgtcagagaacatcatttagttatg
caaccagtagctaacataaaagaaaatttcctaacaaattctgagagcaaaacaacaagc
aacttaatgatgctggactccaaatccaagtatgtcctagacagcatggtggagactgtc
tgtgaagacctggaaacagacaagaaagagcttgccaagctccagactgtccaattggat
gaagatatgcaagacttgtaa
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