Bos taurus (cow): 527039
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Entry
527039 CDS
T01008
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
bta
Bos taurus (cow)
Pathway
bta03430
Mismatch repair
bta03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
527039 (PMS2)
03460 Fanconi anemia pathway
527039 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bta03400
]
527039 (PMS2)
DNA repair and recombination proteins [BR:
bta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
527039 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
527039
NCBI-ProteinID:
NP_001192867
BGD-bta:
BT22021
Ensembl:
ENSBTAG00000007364
VGNC:
97303
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Position
25:complement(38006833..38030149)
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AA seq
864 aa
AA seq
DB search
MERADGPSSELAKAIKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKD
YGVELIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHTSVKVGTRLVFDHNGKILQKTPYPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKE
FAKMVQVLQAYCIISAGVRISCTNQVGQGKRQPVVCTSGSSSMKENIGLVFGQKQLQSLI
PFVQLPPSDSICEEYGLSCSQALHNLFCISGFVSHCAHGVGRSSTDRQFFFINRRPCDPS
KVSRLVNEVYHMYNRHQYPFVVLNVSVDSACVDINVTPDKRQILLQEEKLLLAVLKTSLI
GMFESDVNKLQVSQQPLLDVEGHLIKRPSAEMEKPEPEKKDDPAPLRTRGEEKRVVTISR
LRETFSLRHSTENKSRGPKATDPRRVSPKQKSSAQFPRALGPPCSQKHISEPGEEGRTSA
QGPHDLMSRVEMEEDSGHGSASAGSEEASSTPETSSHPSTDRVASSPEDKFSQENMESRE
KLPETDHRLSGTKCHLNQEESSSTSGVLPQPTKLSSPNAKRFTKEGIPLNPSVLAESVKA
QSASATVDVAVKINKKIVPLDFSMSSLAKRIKQLCQQEQQQESQQNYRKFRAKICPGENQ
AAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVL
QGQRLIAPQTLSLTAVNEAILIENLEIFRKNGFDFVIDEHAPVTERAKLISLPTSKNWTF
GPQDIDELLFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTPLNTSEMKKLITHMGEMD
HPWNCPHGRPTMRHIANLDVISQS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagctgacgggccgagttcagaacttgctaaggccatcaaacctatcgatcgg
aagtcagtccatcagatttgctctgggcaagtggtacttggtctaagcactgctgtgaag
gagttggtagaaaatagtgtggatgccggcgcaactagtattgatctcaggcttaaagac
tatggagtggagctcatcgaagtttcagacaacggatgtggggtagaagaagaaaatttt
gaaggcttaactctgaaacatcacacttcgaagattcaggagtttgcagacctcactcag
gttgaaacttttggctttcgaggggaagctctgagctcactctgtgcactgagcgatgtg
actatttctacctgccacacgtctgtgaaggttgggactcgattagtgtttgatcacaat
ggaaaaattctccagaaaaccccctacccacgacccagggggacgacggtcagcgtgcag
cagctattttatacgcttcctgtgcgccataaggagtttcaaaggaatattaagaaggag
ttcgccaagatggttcaggtgttacaggcatactgcatcatttcagcgggcgtccgtata
agttgcaccaatcaggtcgggcagggcaagcggcagcctgtggtgtgcaccagcggaagc
tccagcatgaaggaaaacatcggattggtgtttgggcagaagcagttgcaaagcctcatc
ccctttgtgcagctgccccctagtgactccatctgcgaagaatatgggctgagctgttcc
caggctctgcacaacctgttttgcatctcaggttttgtttcgcactgtgctcacggcgtg
ggaagaagttcaacggacagacagtttttctttatcaatcggaggccttgtgacccatca
aaggtttccagacttgtgaatgaggtctatcacatgtataatcggcatcagtacccattt
gttgttcttaatgtttctgttgattccgcatgtgtcgacatcaacgttactccagataaa
aggcaaattttactgcaagaggagaagcttttgttggcagttttaaagacgtctttgata
ggaatgttcgagagtgatgttaacaaactccaggtcagccagcagccactgctggatgtg
gaaggtcacttaataaagaggccttcggcagagatggagaagcccgagccagaaaagaag
gatgatcctgccccgttaaggactcgtggagaagagaaaagagtagtgaccatttccagg
ctgagagaaaccttttcccttcgtcactcgactgagaacaagtcccggggtccgaaggcc
actgatccgaggcgggtttctccgaagcagaaaagcagtgcccagtttcctagagctttg
gggcccccctgctcccagaagcacatttctgaacctggggaggaagggaggacttctgct
caggggccccacgacttgatgagcagagtggagatggaggaggactcggggcacggcagc
gcatctgccggctccgaggaggcatccagcacccccgagacaagcagtcaccccagcact
gaccgggtggcaagctcccccgaagacaaattttcccaagaaaatatggagtctcgggaa
aagttacctgaaactgaccatcgtctctcaggcacaaagtgccatttaaaccaagaagaa
agcagctccacatctggagtcttgccgcagcccacaaagctctcatccccaaatgcaaag
cgttttacaaaagaagggattcctttaaatcccagtgtccttgcagagtcggtgaaagcc
cagagtgcgtcagctacagtggatgtagctgtgaaaattaacaagaaaatagtgcccctt
gatttttccatgagttctttagccaaacgaataaagcagttgtgtcagcaagaacagcaa
caagaaagtcaacagaattataggaagtttcgggcaaagatttgccctggagaaaatcaa
gcagcagaagacgaactaagaaaagagatcagcaaaacgatgtttgcagaaatggaaatc
attggtcagtttaacttggggtttatcatcaccaagctgaatgcagatatcttcatagtg
gaccagcatgccacggacgagaaatacaacttcgagatgcttcagcagcacactgttctc
cagggtcaaaggcttatagcacctcagactctcagcctaacggctgtcaatgaagcgatt
ctaatagaaaatctggaaatattcaggaagaatggctttgactttgttattgatgaacac
gcaccagtcactgaaagagccaagttgatttccttgccaaccagtaagaactggaccttt
ggaccccaggacatagacgagctgctcttcatgctgagtgacagccctggggtcatgtgc
cggccctcccgcgtccggcagatgttcgcctccagagcctgtcgcaagtctgtgatgatt
ggaacccctcttaacacaagcgagatgaagaaactcatcacacacatgggggagatggac
catccctggaactgtccccacggaaggcccaccatgagacacattgccaacctggatgtc
atttctcagagctga
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