Bos taurus (cow): 529491
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Entry
529491 CDS
T01008
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bta03400
]
529491 (PMS1)
DNA repair and recombination proteins [BR:
bta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
529491 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
HMG_box_5
ROS_MUCR
Motif
Other DBs
NCBI-GeneID:
529491
NCBI-ProteinID:
NP_001071449
Ensembl:
ENSBTAG00000018795
VGNC:
33077
UniProt:
A0JNP9
LinkDB
All DBs
Position
2:complement(6460095..6572022)
Genome browser
AA seq
932 aa
AA seq
DB search
MKQLSAATVRLLSSSQVITSVVSVVKELIENSLDARATSIDVKLENYGFDKIEVRDNGEG
IKAIDAPVMAVKYYTSKISSHEDLENLTTYGFRGEALGSICCIAEVSITTKTAADNFSTQ
YVLDGGGHIISQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLISYG
ILKPDVRIVFIHNKAIIWQKTRVSDHKMALMSVLGTAVMGNMESFQYHCEESQIFLSGFL
PKHDADHSCTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKID
VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTRYGSLPSTNSYESNKTDVSSADMVV
SKTTETDVLLTKMETSGNNYPNVDTSAIPFQNDVRNDTSGENTNYCLNHQVHIGDHYDDY
FNSENSSIDKNDGNAFKEIPENKSSCEDTQEKNGETWSVDSVGQAQSENGNKGHRDESGE
NEEAAVPEKSAEICVDDWSKGNILNSRGENIEPVKILVPQKSLVSNVNSNNNNTSPEQKN
LCESSCDKNSNVVDNKSGQLTAYDLISNRVIKKPMSASALFVQDHRAQFLTENSKTSLED
ATVQIEELWKTLSEEEKLKYEEKAAKDLERYNKQIKRAIEQESQVSLKDGKKRMKPTSVW
NLAQKHKLKTSPSNQPKLDELFQAQIEKKKNQNIKIVQIPFSMENLKKNFDTQKKFDLEE
KDEFCLIHNLKFPDAWLITSKTEIMLLNSYRVEEALLFKRLLENHKLPAEPLEKPIILTE
SLFNGSHYLEILHKMTADDQRYSGSIYLSDPRLTANGFKIKLIPGVSISENSLEIEGMAN
CLPFYGVMDLKEILNAILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDMQDI
IYRMKHQFRNEITQCVHGRPFFHHLTHLPEAT
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttgtctgcagcaacagttcgcctgctttcaagctctcaagtaatcacttcc
gtggtcagtgttgtaaaagagctcattgaaaactccttggatgcccgtgccacaagcata
gatgttaaactggaaaactatggatttgataaaattgaggtgcgagacaatggtgaaggt
atcaaggctattgatgcacctgtaatggcagtaaagtactacacctccaaaataagtagt
cacgaagaccttgaaaatttgacaacgtatggttttcgtggagaagccttggggtcaatt
tgttgtatagccgaggtttcaattacaacaaagacagctgctgataactttagtacccag
tatgttttagatggtggtggtcacataatttctcaaaaaccttcacatcttggtcaaggt
acaactgtaactgctttacgattatttaagaatctacctgtaagaaagcaattttactca
actgctaaaaaatgtaaagatgaaattaaaaagattcaagatctccttataagctatggt
atacttaaacctgatgtaaggattgtttttatacataacaaggcaattatttggcagaaa
actagagtatcagatcataaaatggctctcatgtctgttctggggactgctgttatgggc
aatatggaatcctttcagtaccactgtgaagaatctcagatttttctaagtggatttctt
ccaaagcatgatgcagaccactcttgcacaagtctttcaaccccagaaaggagtttcatc
tttataaacagtcgaccagtacaccaaaaagatatattgaagctaatccgacattattac
aatctgaaatgtctaaaggaatctactcgtttgtatcccattttctttctgaaaattgac
gttccaacagctgatgtagatgtgaatttaacacctgataaaagtcaagtattgttacag
aataaggaatctgttttaatcgctcttgaaaatctgatgacgactcgttacggatcacta
cctagtacaaattcttacgaaagtaataaaacagatgtttcctcagctgacatggttgtt
agtaaaacaacagaaacagatgtgcttcttactaagatggaaacatctggaaataattat
ccaaatgttgatacttcagccattcctttccaaaatgatgtgcgtaatgatacatctggg
gaaaacactaattattgtttaaatcatcaggtacatattggtgaccattatgatgattat
tttaatagtgaaaattctagcattgataagaatgatggaaatgcatttaaagaaatccca
gagaataagtcatcgtgtgaggacacccaagagaagaatggtgaaacttggtctgtggat
tctgttgggcaagcccaatcagaaaatggcaataaaggccacagagatgagagtggagaa
aatgaagaagcagcagttcctgagaagtctgcggaaatttgtgtagatgactggagcaaa
ggaaatatacttaattctagaggagaaaacattgaacctgtgaaaattttagtgcctcaa
aaaagtttagtgagtaatgtaaatagtaataataataatacaagtcctgaacaaaagaat
ctctgtgaaagttcctgtgacaaaaattcaaatgtggtagataacaaatctggacagctt
acagcttatgatttaattagcaatcgagtaatcaagaaacccatgtcagcaagcgccctt
tttgttcaagatcatcgtgctcagtttctcacagaaaattccaagaccagtttggaagat
gcaacagtacaaattgaagaactgtggaagacattgagtgaagaggaaaaactgaaatat
gaagagaaagctgctaaagacttggaaagatacaataagcaaataaagagagccatcgaa
caggagtcacaagtatcattaaaagatgggaaaaaaaggatgaaacccaccagtgtgtgg
aatttggcacagaagcacaagttgaaaacctcaccatctaatcagccaaaacttgatgag
ctctttcaggcccaaatcgaaaaaaaaaagaaccaaaacattaaaatagttcagatcccc
ttctctatggaaaacttaaaaaagaattttgatacacagaagaaatttgacttagaagaa
aaggacgaattttgcttgatccacaatctcaagtttcctgacgcatggctgattacatcc
aaaacagaaataatgttgttaaattcatatagagtggaagaagctctgctatttaaaaga
cttcttgagaatcacaaacttcctgcagagccactggaaaaaccaattatattaacagag
agtctttttaatggatcccattatttagagattttacataaaatgacagcagatgaccaa
aggtacagcggatcaatttacctgtccgatcctcgtcttacagcaaatggtttcaagata
aaattgataccaggagtttccatttctgaaaactccttggaaatagaaggaatggccaat
tgccttccattctatggagtaatggatttaaaagaaatccttaatgctatattaaacaaa
aatgcaaaggaagtttacgaatgtagacctcgcaaagtgataagttatttagagggagaa
gcagtacgtctgtctagacaattacccatgtacttatcaaaagaggacatgcaagatatt
atctacagaatgaagcaccagtttagaaatgaaattacacagtgtgttcatggtcgccca
ttttttcatcatttaacccatcttccagaagctacataa
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