Bos taurus (cow): 530506
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Entry
530506 CDS
T01008
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
bta
Bos taurus (cow)
Pathway
bta04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
530506 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
530506 (SMARCAD1)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
530506 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
CUE
ERCC3_RAD25_C
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
530506
NCBI-ProteinID:
NP_001192361
BGD-bta:
BT14914
Ensembl:
ENSBTAG00000017061
VGNC:
34989
LinkDB
All DBs
Position
6:complement(30308257..30398961)
Genome browser
AA seq
1029 aa
AA seq
DB search
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRAGTPDSDVT
EKTEDSSVPETPENDRKASISYFKNQRGIQYIDLSSDSEDVVSPNCSSTVQEKKFNKDTV
IIVSEPSEDEESQGLPTMATRNNNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLK
LIDSTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPFEEDEFNDDQSMKKKRLDHGEES
NESAESSTNWEKQESIVLKLQKEFPNFDKEELREVLKEHEWMYTEALESLKVFAEDQDMQ
YASPSEFPNGKEVSSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDSE
YDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELR
PFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIKLMNKCEDISNKLTKQVTMLTGN
GGGWNTEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYL
YQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEEYNV
IVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTP
VQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFI
LRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNMVTEKNTEMCNVMMQ
LRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQY
RHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRY
LRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDK
QAEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIA
TLLKTSMGL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacctggaccgttttcgctttgagaaaagaaataagattgaggaagcg
cccgaagcaacccctcaaccctcccagcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacccctgattcagatgtaact
gaaaaaacagaagattctagtgttccagaaactccagaaaatgacagaaaagcaagtata
tcgtatttcaagaatcaaagagggattcaatacattgatttgtcttctgatagtgaagat
gttgtttccccaaattgctccagtacagttcaagagaaaaaattcaacaaagacacggtg
attatagtttctgagccatctgaagatgaagagtcccaaggccttcctaccatggccact
agaaacaataatgatatttcagaattggaggacctttcggaattggaagaccttaaagat
gctaaacttcagaccttgaaggaactttttccacaaagaagtgacagtgatttacttaag
ttgattgactcaacaagcactatggatggagcaattgctgctgccttgctgatgttcggt
gatgcaggtggtggacccaggaaaagaaaattatcttcttcttcagagccattcgaggaa
gatgaatttaatgatgatcaatctatgaaaaagaagagattggatcatggggaagagtca
aatgaatctgcagaatctagcactaactgggaaaagcaggaaagtattgtgttgaaattg
caaaaggaatttcccaattttgataaagaggaattaagggaagtactcaaggaacatgaa
tggatgtacacagaggctttagaatctttaaaagtatttgcagaagaccaagatatgcag
tatgcttcaccgagtgagtttccaaatggaaaagaggtttcttcaagaagtcaaaattat
cctaaaaatgcagctaaaacaaaactgaaacagaaatgttccatgaaaccacaaaatggt
tttaacaagaaacgtaaaaaaaatgtatttaatcctaaaagagttattgaagactctgaa
tatgattcaggttctgatgtcggtagttcgctagacgaggactatagtagtggtgaagaa
gtgatggaggatggctataaaggtaaaatccttcacttccttcaagatgcttcaatcggt
gaacttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactccgg
ccctttaatagttgggaagctctgttcacaaagatgtccaaaacaaatggcttatcagaa
gatttgatatggcactgtaaaacactgattcaggaaagggatgtagttataaagcttatg
aacaaatgtgaagacatttcaaataaactgacaaaacaagttaccatgctcactggaaat
ggaggtggatggaacacagagcaaccctccattctaaaccaaagtttgtcactcaagccc
tatcagaaggttggtttgaattggctggccctggtacataaacatggacttaatggcatt
ttggcagacgaaatgggcctgggaaaaactattcaagctattgcatttctggcttacctc
tatcaggagggtaataaaggtcctcatttgattgttgttccagcatcaactatagataac
tggttaagagaagttaatttatggtgccccactttaaaggtgctctgttactatggttct
caagaagaacgtaaacagattagatacaacattcatagtagatatgaagaatacaatgta
atcgtgaccacgtataactgtgccatcagcagttctgatgatcgtagtctgtttcgtcgg
ctgaaactgaattatgcaatttttgatgagggccatatgctgaagaatatgggctccatc
cgctaccagcaccttatgacaattaatgcaaataaccgtctgctgctcacaggcacacct
gtgcaaaataacctgttagaactcatgtcgctgttgaattttgttatgccacatatgttc
agtagtagcaccagtgaaatacgaagaatgttttcttctaagacaaaaccagcagatgag
caaagtatatatgaaaaggagagaatagcacatgcaaaacaaattataaaaccatttatt
ctcagaagagtaaaagaagaggttctcaagcagctgccccccaaaaaagatcgaattgag
ttatgtgcaatgtcagagaagcaggaacaactctatatgaatctcttcaacagattgaaa
aagtctatcaataacatggtcacagaaaaaaatacagaaatgtgcaatgtcatgatgcaa
ttgagaaaaatggccaatcatcctttattacatcgccaatattacacagctgaaaaactc
aaggaaatgtctcagcttatgctaaaggaacctacacattgtgaggctaaccctgacctg
atctttgaagatatggaagttatgacagactttgaattacatgtactttgtaaacagtat
cgacatattaataacttccagttagacatggacttgattttagattctggaaaattccga
gttttaggatgcatcttgtctgaattgaagcagaagggtgatagagttgtattatttagc
caatttaccatgatgctggatattttagaggttctcttaaaacatcatcagcataggtac
ctcagattagatgggaagactcagatttctgaaaggattcatctaattgatgagtttaat
accgatatggatatctttgtctttctgctgtcaacaaaagctggtggcttaggaataaac
ctgacttcagcaaatgttgttatacttcatgatattgactgtaatccttacaatgacaaa
caagcagaagatagatgccatagagtaggccagacgaaagaagtactagttataaaatta
ataggccaagggacaattgaagaatccatgctaaaaattaatcaacagaaattgaaacta
gaacaagatatgaccacagtagatgaaggtgacgaaggaagtatgccagcagatatagcc
acattactgaaaacatcaatgggcctgtga
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