Bos taurus (cow): 530880
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Entry
530880 CDS
T01008
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X2
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
530880 (CHD5)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
530880 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
530880
NCBI-ProteinID:
XP_024832538
BGD-bta:
BT27207
Ensembl:
ENSBTAG00000040477
VGNC:
59327
UniProt:
F1MFF9
LinkDB
All DBs
Position
16:47156878..47228618
Genome browser
AA seq
1954 aa
AA seq
DB search
MRGPLGTEEELPRLFADDMENEDEMSEEEDGGLEGFDDFFPEEPVSLPKKKKSKKLKENR
SKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDDEE
DDNEDGCLKEPKSSGQLMAEWGLDDVDYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQAPQPVPIR
KAKTKEGKGPGVRKKIKGSKDVKKKGKGRKVTGLKFRFGGVGSKRKKGSSSEEDEREESD
FDSASIHSSSMRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDDEDEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDVDPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYYDSLKQAYWGHRELMLGEDARLPKRLV
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPATPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPGEVISSDPNTPVPASPAHLLP
GPLGLPDKMEAPLGYMDEKEVGVQKPKKPPEIQALPTALDRVEGEDKQESSDGKERAREE
RLEEMEKAQPSPEQLLKEEVLPEKEKVLDKLELSLIHSRGDSSDFRPDDTKAEEKEPVET
QQNGDKEEDEEGKKEDKIGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSS
QMYNNNFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgatatggag
aacgaggacgagatgtcagaagaagaagatggtggccttgaaggcttcgatgactttttc
ccggaggagcccgtgagcctccccaagaagaaaaagtccaagaagctcaaggagaacagg
tccaaagggaagaggaagaagaaagaggggagcaatgacgagctgtcggaaaatgaagag
gatctggaagagaagtcggagagtgaaggcagtgactactccccgaataaaaagaagaag
aaaaaactcaaggacaagaaggagaaaaaagctaagcggaaaaagaaagatgatgaggag
gatgacaatgaagatgggtgtctcaaggagcccaagtcctcgggacagctcatggccgag
tggggcctggacgacgtggactacctgttctccgaggccgactaccacacgctgaccaac
tataaggccttcagccagttcctcagaccgctcatcgccaagaagaacccgaagatcccc
atgtcaaagatgatgactgtcctgggtgccaaatggcgggagttcagtgccaacaacccc
ttcaagggcagctcggcggcagcagctgcagcggcagtggccgcggccgtggagacggtc
accatcgcgcctcccctggctatcagcccccagcaggcaccccagcctgtgcccatccgc
aaggccaagaccaaagagggcaaggggcctggcgtgaggaagaagatcaaaggctccaag
gatgtgaagaaaaagggtaaagggagaaaggtgactgggctcaagttccgcttcggaggg
gtcggcagcaagaggaagaaggggtcctcgagcgaggaggatgagcgagaggagtcggac
ttcgacagcgccagcatccatagctcctccatgcgttccgagtgctctgctgccctgggg
aagaagagcaagaggaggcgcaagaagaagagaatcgatgatggcgatggctatgagacg
gaccaccaggactactgtgaggtgtgccagcagggtggggagatcattctgtgtgacacc
tgcccgagggcctaccacctcgtctgtctggatcccgagctggagaaagctcctgagggc
aagtggagctgtccccactgtgagaaggaagggatccagtgggagccgaaggacgacgac
gacgacgaggacgagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacggcggcgagctgctctgctgcgacgcctgcccctcttcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgtcccccactgaagggcaaagtccagcggatcctgcactggcggtggacagagccc
ccagcccccttcatggtggggctgccggggcctgacgtggaccctggtgtacccccgccc
aagcccctggagggcatcccagagagagagttcttcgtcaagtgggctgggctctcctac
tggcactgctcctgggtgaaggagctccagctggagctctaccacacagtgatgtatcgc
aactaccaaagaaagaacgacatggatgagccaccgccctttgactatggctctggcgac
gaggacggcaagagcgagaagaggaagaacaaggaccctctctatgccaagatggaggag
cgcttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatcctgaaccac
agcttcgataaaaagggggacgtacattacctaatcaagtggaaagacctgccctacgac
cagtgcacctgggagattgacgaaattgacatcccctactacgacagcctgaagcaggcc
tactggggccacagggagctgatgctgggagaggatgccaggctgcccaagaggctggtc
aagaagggcaagaagctgaaggatgacaaacaggagaagcccccggacacacccattgtg
gatcccacggtcaagtttgacaaacaaccatggtacattgactccacgggcggcacgctg
cacccgtaccagctggagggccttaactggctgcgcttctcctgggcccagggcaccgac
accatcctggccgacgagatgggtctgggcaagactgtgcagaccatcgtcttcctctac
tccctgtacaaggaggggcactccaaagggccctacctggtcagtgcgcccctatccacc
atcatcaactgggaacgtgagttcgagatgtgggcccctgacttctacgtggtcacctac
acgggggacaaggagagccgctccgtgatccgggagaacgagttttcctttgaggacaat
gccattcggagtgggaagaaggtgttccggatgaagaaagaagtgcagatcaaattccac
gtccttctcacctcctatgagctcatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgcctcgtggtggatgaggcccaccggctcaagaacaaccagtccaagttcttt
agggtcttgaacagctacaagatcgattataagctgctgctgacagggaccccccttcag
aacaacctggaagaactgttccacctcctcaacttcctgactccagagaggttcaacaac
ctggagggcttcctggaggagtttgctgacatctccaaggaagaccagatcaagaagctg
cacgacctgttggggccgcacatgctgaggcggctcaaggctgatgtgttcaagaacatg
ccggcaaagactgagctgattgtccgcgtggagttgagccaaatgcagaagaagtactac
aagttcatcctcacgcggaacttcgaggcactgaactccaaggggggtgggaaccaggtg
tcactgcttaacatcatgatggacctgaagaagtgctgcaaccacccctacctcttccct
gtggctgctgtggaggcccccgtcctgcccaatggctcctatgatggcagctctctggtc
aagtcttcagggaagctcatgctgctacagaagatgctcaagaaactgcgggatgaaggg
caccgtgtgctcatcttctcccagatgaccaagatgctggacctcctggaggacttcctg
gagtatgagggctacaagtatgagcggattgacggtggcatcacggggggccttcggcaa
gaagcaattgacagattcaatgcccctggggcccagcagttctgcttcctcctttcgacc
cgggcaggtggcctggggatcaacctggccaccgcagacacggtcatcatctacgactcg
gactggaacccgcacaatgacatccaggccttcagccgcgcccaccgcattgggcagaac
aagaaggtgatgatctaccgctttgtgacgcgggcctcagtggaggagcgcatcacgcag
gtggccaagcgcaagatgatgctcacccacctggtggtgcgacctggcctgggctccaag
tctggctccatgaccaagcaggagctggatgacatcctcaaatttggcacggaggagctc
ttcaaggatgacgtggagggcatgatgtctcagggccagagaccagccacgcccatccct
gatgtccagtcctccaaagggggagccttggccgccagcgccaagaaaaagcatggcagc
actccgccaggtgacaacaaggacgtggaggatagcagtgtgatccactatgacgatgcg
gccatctccaagctgctggaccggaaccaggatgccacggacgacacggagctccagaac
atgaatgaatatctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggatggc
gtggaggaagtggaacgggagatcatcaagcaggaggagaacgtggaccccgactactgg
gagaagctgctgcggcaccactacgagcagcagcaggaggacctggcgcgcaacctgggc
aagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggacgagctctcagacaaccaatctgaatattccattggctctgaggatgaggac
gaggactttgaggaaaggccggaagggcagagtggacggcgacaatccaggaggcagctg
aagagcgacagggacaagcctctgccccctcttcttgcccgagtcggcggcaacattgag
gtgctaggcttcaatgcccgccagcggaaggcctttttgaacgccatcatgcgctggggc
atgcccccccaggatgccttcaactcccactggctggtgcgggaccttcgtgggaagagc
gagaaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgaaccgggggct
gacggcgcggagacctttgcggacggcgtgccccgtgagggcctctccaggcagcacgtg
ctcacgcgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcacgtc
aacgggaagtacagcaccccggatctgatccccgaggggcccgagggcaagaagccaggc
gaagtcatctcctcggatcccaacacaccagtgcccgccagccctgcccacctcctgcct
ggccctctgggcctgccagacaaaatggaagccccactaggctacatggatgagaaggag
gtgggggtgcagaagccaaagaagcccccagaaatccaggccttgccaactgccctggac
agagtggagggagaggacaagcaggagagctcagatggcaaggagagggcccgagaggag
cgactggaggagatggagaaggcccagccctccccggagcagctgctgaaagaagaagtg
cttcctgagaaggagaaggttctggacaagctggaactgagcttgattcacagcagaggc
gacagcagtgacttcaggccagatgacaccaaagctgaggagaaggagcctgttgagacc
cagcaaaatggtgacaaagaggaagatgaagaggggaagaaagaggacaagatcgggaaa
ttcaagtttatgttcaacattgcagacgggggattcacagagctgcacacactgtggcag
aacgaggagcgtgcggctgtgtcctcggggaaaatctacgacatctggcaccggcgccac
gactactggctgctggcgggcatcgtcacgcatggctatgcccgctggcaggacatccag
aacgacccgagatacatgatcctcaatgagcccttcaagtctgagatccacaagggcaac
tacttggagatgaagaacaagttcctggcccgcaggttcaagctgctggagcaggcgctg
gtcattgaggaacagctccggagggccgcatacctcaacatgacccaggaccccaaccat
cctgccatggccctcaacgcccgcctggccgaggtggagtgccttgccgagagccaccag
cacctgtccaaggagtccctcgccgggaacaagcctgccaatgctgtgctgcacaaggtc
ctgaaccagctggaggagctgctgagcgacatgaaggcggacgtgacgcgcctcccctcc
atgctgtcccgcattcccccggtggccgcccgcctccagatgtcggagcgcagcatcctg
agccgcctgaccaaccgagccggcgaccccaccatccagcagggcgctttcggctcctcc
cagatgtacaacaacaactttgggcccaacttccggggccctggaccgggagggattgtc
aactacaaccagatgcccctggggccctatgtgaccgatatctag
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integrated database retrieval system
