Bos taurus (cow): 531673
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Entry
531673 CDS
T01008
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
bta
Bos taurus (cow)
Pathway
bta03013
Nucleocytoplasmic transport
bta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
531673 (CASC3)
03015 mRNA surveillance pathway
531673 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
531673 (CASC3)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
531673 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
531673
NCBI-ProteinID:
NP_001091538
BGD-bta:
BT16037
Ensembl:
ENSBTAG00000006250
VGNC:
54702
UniProt:
A5D7H5
LinkDB
All DBs
Position
19:40433270..40455092
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AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSVGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGDDGEYSEEENSKVELKSEAN
DAANSSAKDEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPSWIGERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRTGFRPAEAGGQHAGRSGETVKHETSYRSRHLEQTPVR
DPSPEADAQVLGSPEKEEVAPEIPNPAPDTAPPVPDRPVEKKSYSRARRTRIKAGDAGKV
AEEVPPPPEGLTPAPPVPEATPPTPAKTGNWEAPVDSTTGGLEQDVAQLNITEQNWSPGQ
PAFLQSRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggacaccgaggacgaagaatctggtgcc
tccggctcagacagcggcggttccccggcgcggggcggtgggagctgcagcggtagtgtt
ggaggcggcggcagcggctctctgccttcccagcgcggagggcgagctggggcccttcat
ctgcggcgggtggagagcgggggcgctaagagcgctgaggagtcggagtgtgagagtgaa
gatggcatcgagggcgatgctgttctttcggattatgaaagtgcagaagactcagaaggt
gatgacggggagtacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagatgagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcagagtggggatggacaggaaagcacagagcctgtggagaac
aaagttggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaacccagca
tacataccccggaaagggctcttttttgagcatgatcttcgagggcagactcaggaggaa
gaagtcagacccaagggacgtcagcgaaagctgtggaaggatgagggtcgctgggagcat
gacaagtttcgggaagatgaacaggctccaaagtcccgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgatatcaaaccccgaagaatccggaaa
cctaggtttgggagtcctccacaaagagatccaagctggattggtgagcggccaaataag
tcccatcgccaccagggtcctgggggcaccctaccacccaggacatttatcaacaggaat
gctgcgggtactggccgcatgtcggctcccaggaattactctcgatctggaggcttcaag
gaaggtcgtactggttttaggcctgcggaagctggtggacagcatgctggccggtctggc
gagactgttaaacatgagactagttaccggtctcggcatttggaacagactcctgtaagg
gatccatctccagaagcagatgctcaagtgcttggcagtcctgagaaggaagaggtagcc
cccgagataccaaatcctgctcctgatactgcaccaccagttcctgacaggcctgttgaa
aagaaatcctattcccgggcaagaagaaccagaatcaaagctggagatgcaggcaaggtt
gcagaggaggtgccccctccacctgaagggctgaccccagcacctccagtcccagaagct
acacctcctacgcctgctaagactggaaactgggaggctccggtggattctactacaggg
ggtcttgaacaagatgtggcacaactaaatataacagaacagaactggagtccagggcag
cctgccttcctgcaatcacgggagcttcggggtatgcccaaccacatacacatgggagca
ggacctccacctcagttcaaccgaatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatcacaacggcaaagacctgtgccggagccccctgcccctcctgtgcatatc
agcatcatggaaggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtacagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctgcccaatccaggcctctat
cccccaccagtatccatgtctccagggcaaccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggcaatcccagttacccttatgctccaggg
gcattgcctcccccaccacctcctcatctgtatcctaacacacaggccccatcgcaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccgcctgaggttgtaagcagg
ggttccagctaa
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