KEGG   Bos taurus (cow): 532406
Entry
532406            CDS       T01008                                 
Symbol
GIGYF1
Name
(RefSeq) GRB10-interacting GYF protein 1
  KO
K18730  PERQ amino acid-rich with GYF domain-containing protein
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    532406 (GIGYF1)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     532406 (GIGYF1)
   Surveillance factors
    Other surveillance factors
     532406 (GIGYF1)
SSDB
Motif
Pfam: GYF GYF_2 PRTase_3
Other DBs
NCBI-GeneID: 532406
NCBI-ProteinID: NP_001192927
Ensembl: ENSBTAG00000015738
VGNC: 29355
LinkDB
Position
25:35894604..35909566
AA seq 1034 aa
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLADYRYGREEMLALYVKESKVPDEL
QDKEFAALLQEEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGPPLGGASRGRGS
TRSRGRGRGDSCFYQRSIEEGDGAFGRNPREIQRSQSWDDRGERRFEKSARRDGARSGFD
EGGAGPRKEHARSDSENWRSLREEQEEEEEGSWRLGAGPRRDGDRWRSTSPDGGPRSAGW
REHGDRRRKFEFDLRGDRGGCGEEEGRGGGGSSHLRRCRGPDGFDDDKDGLPEWCLDDED
EEMGTFDASGAFLPLKKGPKEPIPEEQELDFQGLEEEEEEPSEGLDEEGPEAGGKELTPL
PPQEEKSSSPSPLPTLGPLWGANGEGDDPVEKDLPAAEEDMRGMQLSPGAGSPPGPPDLE
DDEGLKHLQQEAEKLVASLQDSSLEEEQFTAAIQAQGLRHSAAATALPLSHGAARKWFYK
DPQGEIQGPFTTQEMAEWFQAGYFSMALLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPP
PLLGNMDQERLKKQQELAAAALYQQLQHQQFLQLVGSRQLPQCVLREKAALGDLPPPQQQ
QLTAFLQQLQALKPPRGGDQNLLPTMNRSLSVPDSGPLWDIHTSASPQSGGEASLWDIPI
NSSTQGPILEQLQLQHKFQERREVELRAKREEEERKRREEKRRQQQQQQEEQKRRQEEEE
LFRRKQARQQELLLKLLQQQQQAVAAVPAPPTPSSPPPLWAGLAKQGLSMKTLLELQLEG
ERHLHKQPPPREPSRAQAPNHRVQLGGLGSAPLNQWVSEAGPLWGGPDKSGGGSSSLGLW
EDTLKSSGSLARSLGLKNSRSSPSLSDSYSHLSGRPVRKKTEEEEKLLKLLQGIPRPQDG
FTQWCEQMLHTLSTTGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLER
RAKQKASQQRQQQQEAWLSSGSLQTAFQTNHSTKLGPGEGSKAKRRALMLHSDPSILGYS
LHGPSGEIESVDDY
NT seq 3105 nt   +upstreamnt  +downstreamnt
atggcagcggagaccctcaactttgggcctgagtggctgagggctctttccagtggtggc
agtgtggcctccccacccccgtcccccgccatgcccaagtacaagctggccgactatcgc
tatgggcgcgaggagatgctggccctctacgtcaaggagagcaaggtccctgacgagctg
caggacaaggagtttgctgcgttgctgcaggaggagccactgcagcccctcgcgctggag
ccgctgactgaggaggagcagagaaacttctccctgtcagtgaacagcgtggccgtgctg
aggctgatggggaaaggggctgggccccccctaggtggcgcctcccgtggcaggggcagc
acacggagccgaggccgtggccgtggtgacagttgcttttaccaaagaagcattgaagaa
ggtgatggggcctttggccgaaacccccgggagatccagcgtagccagagttgggatgac
agaggcgagaggcggtttgagaaatcggccaggagagatggagcacgctccgggtttgat
gagggaggggctggcccgaggaaggagcacgcccgctcagatagcgaaaattggcgttct
ctccgagaggagcaagaggaagaagaggaaggcagctggagactcggggcaggaccccgg
cgagacggtgaccgctggcgctccaccagccctgatggtggcccccgctctgctggctgg
cgggaacatggggaccggcgtcgcaagtttgaatttgatttgcgaggggatcgaggaggg
tgtggtgaagaggaggggcggggtgggggggggagctctcacctccggagatgcaggggg
cctgacggcttcgatgacgacaaggatgggctcccggagtggtgcctggatgatgaggac
gaagaaatgggcacctttgatgcctccggggccttcttgcctctcaagaagggccccaag
gagcccattcctgaggagcaggagctcgacttccagggcctggaggaagaggaggaagaa
ccttccgaagggctagacgaggaggggcccgaggcgggtgggaaggaactgaccccgctg
cctcctcaggaggagaagtccagctccccgtccccactgcccaccttgggcccgctctgg
ggagctaacggggaaggcgatgacccagtggagaaagacctgcctgcagctgaagaggac
atgaggggaatgcagctaagtcctggggcgggctcaccgcctggcccaccagacctggaa
gatgatgaaggcttgaagcacctgcagcaggaggcggagaagctcgtggcctccctgcag
gacagctccctggaggaggagcagttcacggccgccatccaggcccagggcctgcgtcac
tctgcagccgccactgccctccccctcagccatggtgcggcccggaagtggttctacaag
gacccgcagggcgagatccaaggccccttcacgacccaggagatggcggagtggttccag
gcgggctacttctccatggccctgctggtgaagcggggctgtgatgagggcttccagcca
ctgggtgaggtgatcaagatgtggggtcgcgtaccctttgcccctgggccctcacctccc
ccgctgctgggaaacatggaccaggagcggctgaagaagcaacaggagctggcagcagcc
gccttgtaccagcagctgcagcaccagcagtttcttcagctggtcggcagccgccagctc
ccgcagtgcgtgctccgggaaaaggcagctctgggagacctgccgccgccgcagcagcag
cagctcaccgcgttcctgcagcagctccaagctctcaaaccccccaggggcggggaccag
aacttgctcccgacgatgaaccggtccttgtcggtgccagactcgggtcccctctgggac
atacatacctcagcctcaccacagtcaggcggtgaggccagtctttgggatataccaatt
aactcttcgactcagggtccaattctagaacaactccagctgcaacacaaattccaggag
cgcagagaagtggagctcagggcgaagcgggaggaggaggagcggaagcgccgggaagag
aagcgccgccagcagcagcagcagcaggaggagcagaagcggcggcaggaggaagaggag
ctgttccggcgcaagcaggcgcggcagcaggagctgctgctgaagctgctgcagcagcag
cagcaggcggtggccgccgtccccgcgcctcctacacccagttccccgcctccgctgtgg
gctggcctggccaagcagggcctgtccatgaagacgctgctggagctgcagctggagggc
gagcggcacctgcataagcagcccccgcctcgggagccatcgcgggcccaggcccccaac
caccgcgtgcagctcgggggcctgggctccgcccccctgaaccagtgggtatctgaggcc
gggccgctgtggggtgggcccgacaagagtgggggcggcagcagcagcctgggcctctgg
gaagacaccctcaagagcagtgggagcctggcccggagcctgggcctgaagaacagccgc
agcagcccctctctcagtgactcgtacagccacttgtctggtcggcctgtgcgcaaaaag
acggaggaggaagagaagctgctgaagctgctgcagggcatcccccggccccaggatggc
ttcacccagtggtgtgagcagatgctgcacacgctgagcaccacgggcagcctggacgtg
cccatggctgtagcgatcctcaaggaggtggaatccccctatgacgtccacgactatatt
cgttcctgcctgggggacacgctggaagccaaagaatttgccaaacaattcctggagcgg
agggccaagcagaaggccagccagcagcggcagcagcagcaggaggcttggctgagcagc
ggctccctacagacagcctttcagaccaaccacagcaccaagcttggccccggggagggc
agcaaggccaagaggcgggcactgatgctgcactcggaccccagcatcttggggtactcc
ctgcacggaccttctggtgagatcgagagcgtggatgactactga

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